Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40568
         (846 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021217-1|AAX33365.1|  352|Drosophila melanogaster RH63642p pro...    30   4.6  
AE014298-852|AAN09162.1|  352|Drosophila melanogaster CG3774-PB,...    30   4.6  
AE014298-851|AAF46131.1|  352|Drosophila melanogaster CG3774-PA,...    30   4.6  

>BT021217-1|AAX33365.1|  352|Drosophila melanogaster RH63642p
           protein.
          Length = 352

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 596 TLATFRRVLFAFIYFRNKISLRHYL 670
           TL  F  +LF+ IYFRN  +L H++
Sbjct: 285 TLRKFVSLLFSIIYFRNPFTLNHWV 309


>AE014298-852|AAN09162.1|  352|Drosophila melanogaster CG3774-PB,
           isoform B protein.
          Length = 352

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 596 TLATFRRVLFAFIYFRNKISLRHYL 670
           TL  F  +LF+ IYFRN  +L H++
Sbjct: 285 TLRKFVSLLFSIIYFRNPFTLNHWV 309


>AE014298-851|AAF46131.1|  352|Drosophila melanogaster CG3774-PA,
           isoform A protein.
          Length = 352

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 596 TLATFRRVLFAFIYFRNKISLRHYL 670
           TL  F  +LF+ IYFRN  +L H++
Sbjct: 285 TLRKFVSLLFSIIYFRNPFTLNHWV 309


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,181,734
Number of Sequences: 53049
Number of extensions: 719779
Number of successful extensions: 1397
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1397
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4044853644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)