Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40564
(838 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X99293-1|CAA67679.1| 152|Drosophila melanogaster CRP1 protein p... 59 6e-09
U59498-1|AAC47295.1| 152|Drosophila melanogaster nucleoplasmin-... 59 6e-09
AY119592-1|AAM50246.1| 152|Drosophila melanogaster LD16456p pro... 59 6e-09
AE014297-4506|AAF56988.1| 152|Drosophila melanogaster CG7917-PA... 59 6e-09
AE014297-4505|AAF56987.1| 156|Drosophila melanogaster CG7911-PA... 50 3e-06
U59497-1|AAC47294.1| 121|Drosophila melanogaster nucleoplasmin-... 39 0.007
AY075169-1|AAL68039.1| 244|Drosophila melanogaster AT05815p pro... 31 1.5
AE014297-755|AAF54243.3| 713|Drosophila melanogaster CG31369-PA... 31 2.6
AF158179-1|AAD48780.1| 1711|Drosophila melanogaster Chiffon-2 pr... 30 3.4
AF158178-1|AAD48779.1| 1695|Drosophila melanogaster Chiffon prot... 30 3.4
AE014134-2711|AAG22437.1| 1695|Drosophila melanogaster CG5813-PB... 30 3.4
AE014134-2710|AAF53530.1| 1711|Drosophila melanogaster CG5813-PA... 30 3.4
AE014297-2785|AAX52968.1| 512|Drosophila melanogaster CG33518-P... 29 7.9
>X99293-1|CAA67679.1| 152|Drosophila melanogaster CRP1 protein
protein.
Length = 152
Score = 59.3 bits (137), Expect = 6e-09
Identities = 28/55 (50%), Positives = 38/55 (69%)
Frame = +3
Query: 42 MTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQV 206
M +E FYGVTL++ S TWD + +Y R KLVI+Q LLG +AK +E NV++V
Sbjct: 1 MAEESFYGVTLTAESDSVTWDVDE--DYARGQKLVIKQILLGAEAKENEFNVVEV 53
Score = 39.1 bits (87), Expect = 0.007
Identities = 16/31 (51%), Positives = 24/31 (77%)
Frame = +2
Query: 251 IEVGESRHVRLDIEFPDAPVTFTLVQGSGPV 343
++ GE+R V D+EF ++ VTF L++GSGPV
Sbjct: 67 LKAGETRAVNPDVEFYESKVTFKLIKGSGPV 97
>U59498-1|AAC47295.1| 152|Drosophila melanogaster
nucleoplasmin-like protein protein.
Length = 152
Score = 59.3 bits (137), Expect = 6e-09
Identities = 28/55 (50%), Positives = 38/55 (69%)
Frame = +3
Query: 42 MTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQV 206
M +E FYGVTL++ S TWD + +Y R KLVI+Q LLG +AK +E NV++V
Sbjct: 1 MAEESFYGVTLTAESDSVTWDVDE--DYARGQKLVIKQILLGAEAKENEFNVVEV 53
Score = 39.1 bits (87), Expect = 0.007
Identities = 16/31 (51%), Positives = 24/31 (77%)
Frame = +2
Query: 251 IEVGESRHVRLDIEFPDAPVTFTLVQGSGPV 343
++ GE+R V D+EF ++ VTF L++GSGPV
Sbjct: 67 LKAGETRAVNPDVEFYESKVTFKLIKGSGPV 97
>AY119592-1|AAM50246.1| 152|Drosophila melanogaster LD16456p
protein.
Length = 152
Score = 59.3 bits (137), Expect = 6e-09
Identities = 28/55 (50%), Positives = 38/55 (69%)
Frame = +3
Query: 42 MTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQV 206
M +E FYGVTL++ S TWD + +Y R KLVI+Q LLG +AK +E NV++V
Sbjct: 1 MAEESFYGVTLTAESDSVTWDVDE--DYARGQKLVIKQILLGAEAKENEFNVVEV 53
Score = 39.1 bits (87), Expect = 0.007
Identities = 16/31 (51%), Positives = 24/31 (77%)
Frame = +2
Query: 251 IEVGESRHVRLDIEFPDAPVTFTLVQGSGPV 343
++ GE+R V D+EF ++ VTF L++GSGPV
Sbjct: 67 LKAGETRAVNPDVEFYESKVTFKLIKGSGPV 97
>AE014297-4506|AAF56988.1| 152|Drosophila melanogaster CG7917-PA
protein.
Length = 152
Score = 59.3 bits (137), Expect = 6e-09
Identities = 28/55 (50%), Positives = 38/55 (69%)
Frame = +3
Query: 42 MTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQV 206
M +E FYGVTL++ S TWD + +Y R KLVI+Q LLG +AK +E NV++V
Sbjct: 1 MAEESFYGVTLTAESDSVTWDVDE--DYARGQKLVIKQILLGAEAKENEFNVVEV 53
Score = 39.1 bits (87), Expect = 0.007
Identities = 16/31 (51%), Positives = 24/31 (77%)
Frame = +2
Query: 251 IEVGESRHVRLDIEFPDAPVTFTLVQGSGPV 343
++ GE+R V D+EF ++ VTF L++GSGPV
Sbjct: 67 LKAGETRAVNPDVEFYESKVTFKLIKGSGPV 97
>AE014297-4505|AAF56987.1| 156|Drosophila melanogaster CG7911-PA
protein.
Length = 156
Score = 50.4 bits (115), Expect = 3e-06
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Frame = +3
Query: 42 MTDEFFYGVTLSSSHQSETWD-PEAKAEY-PRSNKLVIRQALLGPDAKPDELNVIQVE 209
M E FYGVTLS ++ P+ EY S+KL+I+Q LGP+AK E NV+Q E
Sbjct: 1 MESESFYGVTLSEKEAIAQFEVPDVPEEYIVHSHKLIIKQISLGPEAKTGEFNVVQAE 58
Score = 45.2 bits (102), Expect = 1e-04
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = +2
Query: 251 IEVGESRHVRLDIEFPDAPVTFTLVQGSGPV 343
++VGE+R +R ++EFP+ VTF LVQGSGPV
Sbjct: 77 LKVGETRSLRPNVEFPNGSVTFKLVQGSGPV 107
>U59497-1|AAC47294.1| 121|Drosophila melanogaster
nucleoplasmin-like protein-short protein.
Length = 121
Score = 39.1 bits (87), Expect = 0.007
Identities = 16/31 (51%), Positives = 24/31 (77%)
Frame = +2
Query: 251 IEVGESRHVRLDIEFPDAPVTFTLVQGSGPV 343
++ GE+R V D+EF ++ VTF L++GSGPV
Sbjct: 36 LKAGETRAVNPDVEFYESKVTFKLIKGSGPV 66
Score = 29.9 bits (64), Expect = 4.5
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +3
Query: 141 LVIRQALLGPDAKPDELNVIQV 206
+VI+Q LLG +AK +E NV++V
Sbjct: 1 MVIKQILLGAEAKENEFNVVEV 22
>AY075169-1|AAL68039.1| 244|Drosophila melanogaster AT05815p
protein.
Length = 244
Score = 31.5 bits (68), Expect = 1.5
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 73 FHHHISQRHGIQRQKQNTHAATSSSFVKHC*VQMPNQ 183
FHHH Q+ Q+Q+Q HAA +++ H Q P Q
Sbjct: 162 FHHHQQQQQQ-QQQQQQQHAAAAAAAALHAASQHPQQ 197
>AE014297-755|AAF54243.3| 713|Drosophila melanogaster CG31369-PA
protein.
Length = 713
Score = 30.7 bits (66), Expect = 2.6
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 73 FHHHISQRHGIQRQKQNTHAATSSSFVKHC*VQMPNQ 183
FHHH Q+ Q+Q+Q HAA +++ H Q P Q
Sbjct: 633 FHHHQQQQ---QQQQQQQHAAAAAAAALHAASQHPQQ 666
>AF158179-1|AAD48780.1| 1711|Drosophila melanogaster Chiffon-2
protein.
Length = 1711
Score = 30.3 bits (65), Expect = 3.4
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 455 DEDNEEGEPKGKKAKMSNMP-KAKLHRPRRMPRNEQTAW 568
DED G P G +MSN+ A +R R+ ++ +T W
Sbjct: 1312 DEDVSRGNPPGSGRRMSNLNLYASYYRKRKSLKSNRTGW 1350
>AF158178-1|AAD48779.1| 1695|Drosophila melanogaster Chiffon protein.
Length = 1695
Score = 30.3 bits (65), Expect = 3.4
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 455 DEDNEEGEPKGKKAKMSNMP-KAKLHRPRRMPRNEQTAW 568
DED G P G +MSN+ A +R R+ ++ +T W
Sbjct: 1312 DEDVSRGNPPGSGRRMSNLNLYASYYRKRKSLKSNRTGW 1350
>AE014134-2711|AAG22437.1| 1695|Drosophila melanogaster CG5813-PB,
isoform B protein.
Length = 1695
Score = 30.3 bits (65), Expect = 3.4
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 455 DEDNEEGEPKGKKAKMSNMP-KAKLHRPRRMPRNEQTAW 568
DED G P G +MSN+ A +R R+ ++ +T W
Sbjct: 1312 DEDVSRGNPPGSGRRMSNLNLYASYYRKRKSLKSNRTGW 1350
>AE014134-2710|AAF53530.1| 1711|Drosophila melanogaster CG5813-PA,
isoform A protein.
Length = 1711
Score = 30.3 bits (65), Expect = 3.4
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 455 DEDNEEGEPKGKKAKMSNMP-KAKLHRPRRMPRNEQTAW 568
DED G P G +MSN+ A +R R+ ++ +T W
Sbjct: 1312 DEDVSRGNPPGSGRRMSNLNLYASYYRKRKSLKSNRTGW 1350
>AE014297-2785|AAX52968.1| 512|Drosophila melanogaster CG33518-PA
protein.
Length = 512
Score = 29.1 bits (62), Expect = 7.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 38 HHDGRVFLWCHPFIITSVRDMGSRGK 115
H GR F++C P SV MG RG+
Sbjct: 445 HLSGRRFVFCFPISTQSVAQMGRRGR 470
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,666,423
Number of Sequences: 53049
Number of extensions: 692493
Number of successful extensions: 2145
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2124
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3983256888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -