Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40563
(804 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 134 1e-32
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 81 1e-16
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 75 1e-14
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 72 1e-13
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 56 6e-09
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 54 2e-08
SPAC1687.14c |||EF hand family protein, unknown role|Schizosacch... 46 6e-06
SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr 2|||Ma... 36 0.007
SPBC11G11.02c |end3||actin cortical patch component End3 |Schizo... 36 0.009
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 32 0.083
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 32 0.11
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 31 0.19
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 29 0.58
SPCC1183.11 ||SPCC31H12.01|MS ion channel protein 1|Schizosaccha... 28 1.4
SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces po... 27 3.1
SPCC162.06c |||vacuolar sorting protein Vps60|Schizosaccharomyce... 27 3.1
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 27 4.1
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 27 4.1
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 27 4.1
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 27 4.1
SPBC1773.16c |||transcription factor |Schizosaccharomyces pombe|... 26 5.5
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 26 5.5
SPBC530.06c |||translation initiation factor eIF3 alpha subunit ... 26 7.2
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 25 9.5
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 134 bits (324), Expect = 1e-32
Identities = 60/84 (71%), Positives = 74/84 (88%)
Frame = +3
Query: 255 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 434
F EFLTMMARKMKDTD+EEE+REAF+VFDKDGNG+I+ EL HV+T+LGE+L+ EEV +M
Sbjct: 67 FTEFLTMMARKMKDTDNEEEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADM 126
Query: 435 IREADIDGDGQVNYEEFVTMMTSK 506
IREAD DGDG +NYEEF +++SK
Sbjct: 127 IREADTDGDGVINYEEFSRVISSK 150
Score = 111 bits (268), Expect = 8e-26
Identities = 52/62 (83%), Positives = 57/62 (91%)
Frame = +1
Query: 73 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 252
LT+EQIAEF+EAFSLFD+D DG IT+ ELG VMRSLGQ+PT AELQDMINEVDADGNGTI
Sbjct: 6 LTDEQIAEFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTI 65
Query: 253 DF 258
DF
Sbjct: 66 DF 67
Score = 68.5 bits (160), Expect = 1e-12
Identities = 34/78 (43%), Positives = 50/78 (64%)
Frame = +3
Query: 273 MMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADI 452
M R + D + E REAF +FD+D +G I++ EL VM +LG+ T E+ +MI E D
Sbjct: 1 MTTRNLTD-EQIAEFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDA 59
Query: 453 DGDGQVNYEEFVTMMTSK 506
DG+G +++ EF+TMM K
Sbjct: 60 DGNGTIDFTEFLTMMARK 77
Score = 64.5 bits (150), Expect = 2e-11
Identities = 31/66 (46%), Positives = 45/66 (68%)
Frame = +1
Query: 61 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 240
M D EE++ +EAF +FDKDG+G IT +EL V+ SLG+ ++ E+ DMI E D DG
Sbjct: 78 MKDTDNEEEV---REAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDG 134
Query: 241 NGTIDF 258
+G I++
Sbjct: 135 DGVINY 140
Score = 37.1 bits (82), Expect = 0.003
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 91 AEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGTI 252
AE ++ + D DG+GTI E T+M R + E E+++ D DGNG I
Sbjct: 48 AELQDMINEVDADGNGTIDFTEFLTMMARKMKDTDNEEEVREAFKVFDKDGNGYI 102
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 81.4 bits (192), Expect = 1e-16
Identities = 36/82 (43%), Positives = 56/82 (68%)
Frame = +3
Query: 261 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIR 440
+F++ ++ K+++T+SEEE +AFRVFDKD +G+I A+ M LGEKL+D EV M++
Sbjct: 62 KFMSFVSNKLRETESEEEYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQLMVQ 121
Query: 441 EADIDGDGQVNYEEFVTMMTSK 506
EAD G +Y +FV + +K
Sbjct: 122 EADPTNSGSFDYYDFVQRIMAK 143
Score = 56.0 bits (129), Expect = 6e-09
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = +1
Query: 76 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV 228
++EQ E KEAF L+D D DG I T +G+V+RSLG N T+AEL + NE+
Sbjct: 4 SKEQTDEMKEAFVLYDIDKDGLIPTSHVGSVLRSLGINVTDAELAKLSNEL 54
Score = 49.2 bits (112), Expect = 7e-07
Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = +1
Query: 55 STMADQLTE-EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVD 231
S ++++L E E E+ +AF +FDKD G I T + M++LG+ ++ E+Q M+ E D
Sbjct: 65 SFVSNKLRETESEEEYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQLMVQEAD 124
Query: 232 ADGNGTIDF 258
+G+ D+
Sbjct: 125 PTNSGSFDY 133
Score = 37.1 bits (82), Expect = 0.003
Identities = 19/69 (27%), Positives = 43/69 (62%)
Frame = +3
Query: 300 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 479
+ +E++EAF ++D D +G I + + V+ +LG +TD E+ ++ E GD ++ +
Sbjct: 6 EQTDEMKEAFVLYDIDKDGLIPTSHVGSVLRSLGINVTDAELAKLSNEL---GDA-IDEK 61
Query: 480 EFVTMMTSK 506
+F++ +++K
Sbjct: 62 KFMSFVSNK 70
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 74.9 bits (176), Expect = 1e-14
Identities = 34/86 (39%), Positives = 53/86 (61%)
Frame = +3
Query: 240 KRHDRFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 419
K + + +F+ +M K+ + D EEI+ AF +FD D G IS LR V L E + D+
Sbjct: 87 KGYLQMEDFVRVMTEKIVERDPLEEIKRAFELFDDDETGKISLRNLRRVAKELNENIDDQ 146
Query: 420 EVDEMIREADIDGDGQVNYEEFVTMM 497
E++ MI E D+D DG++N +EF+ +M
Sbjct: 147 ELEAMIEEFDLDQDGEINEQEFIAIM 172
Score = 52.0 bits (119), Expect = 1e-07
Identities = 26/69 (37%), Positives = 39/69 (56%)
Frame = +3
Query: 300 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 479
+ ++I EAF++FD D + I ELR M LG EV +++R+ D G G + E
Sbjct: 34 EQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGYLQME 93
Query: 480 EFVTMMTSK 506
+FV +MT K
Sbjct: 94 DFVRVMTEK 102
Score = 51.2 bits (117), Expect = 2e-07
Identities = 24/59 (40%), Positives = 34/59 (57%)
Frame = +1
Query: 70 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 246
++TEEQ + EAF LFD D D I EL MR+LG N ++E+ ++ + D G G
Sbjct: 30 EITEEQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKG 88
>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 141
Score = 71.7 bits (168), Expect = 1e-13
Identities = 32/63 (50%), Positives = 46/63 (73%)
Frame = +3
Query: 309 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 488
EE + F+VFDKD G I ELR+V+T+LGEKL++EE+DE+++ + DG VNY +FV
Sbjct: 77 EEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-DGMVNYHDFV 135
Query: 489 TMM 497
M+
Sbjct: 136 QMI 138
Score = 48.0 bits (109), Expect = 2e-06
Identities = 20/47 (42%), Positives = 33/47 (70%)
Frame = +1
Query: 97 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 237
+K+AFSLFD+ G G I +G ++R+ GQNPT AE+ ++ + + A+
Sbjct: 8 YKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAE 54
Score = 37.1 bits (82), Expect = 0.003
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1
Query: 94 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV 228
EF + F +FDKD G I EL V+ SLG+ + E+ +++ V
Sbjct: 78 EFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGV 122
Score = 26.6 bits (56), Expect = 4.1
Identities = 15/60 (25%), Positives = 33/60 (55%)
Frame = +3
Query: 318 REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 497
++AF +FD+ G G I + ++ G+ T E+ E+ E+ + +V+ E+F+ ++
Sbjct: 9 KQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEI--ESTL--PAEVDMEQFLQVL 64
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 56.0 bits (129), Expect = 6e-09
Identities = 32/99 (32%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Frame = +3
Query: 255 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM-----TNLGEKLTDE 419
F EF+ ++ + EE+++ AF+++D D +G+IS EL V+ TNL E +
Sbjct: 75 FQEFINSLSVFSVHGNKEEKLKFAFKIYDIDRDGYISNGELYLVLKMMVGTNLREDQLQQ 134
Query: 420 EVDEMIREADIDGDGQVNYEEFVTMMTSKWPPASVCVKS 536
VD+ I E D D DG++++EEF +++ +S+ + S
Sbjct: 135 IVDKTIMEVDKDRDGKISFEEFKDIVSGSNVTSSMTLDS 173
Score = 30.7 bits (66), Expect = 0.25
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +1
Query: 76 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 255
+ E+I ++ F D + G+I E ++ S+ NP + L + VD DG G +D
Sbjct: 19 SNEEIERIRKRFIKIDANQSGSIDRNEFLSIP-SVASNPLASRL---FSVVDEDGGGDVD 74
Query: 256 F 258
F
Sbjct: 75 F 75
>SPAC926.03 |rlc1||myosin II regulatory light chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 54.0 bits (124), Expect = 2e-08
Identities = 24/54 (44%), Positives = 35/54 (64%)
Frame = +1
Query: 70 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVD 231
QLT QI E KEAF+L DKDGDG I +++ T++ SL Q+ +E + M ++
Sbjct: 41 QLTSSQIQELKEAFALLDKDGDGNIGREDVKTMLTSLNQDASEDSINHMFESIN 94
Score = 41.5 bits (93), Expect = 1e-04
Identities = 21/75 (28%), Positives = 39/75 (52%)
Frame = +3
Query: 264 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRE 443
FLT M + ++ EAF FD +G I + +R ++++G+++ +EV+ ++R
Sbjct: 102 FLTAMGSMLCRISPRNDLLEAFSTFDDTQSGKIPISTMRDALSSMGDRMDPQEVESILR- 160
Query: 444 ADIDGDGQVNYEEFV 488
G YE+FV
Sbjct: 161 -SYTSHGVFYYEKFV 174
Score = 39.9 bits (89), Expect = 4e-04
Identities = 18/65 (27%), Positives = 38/65 (58%)
Frame = +3
Query: 309 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 488
+E++EAF + DKDG+G I +++ ++T+L + +++ ++ M + +N F+
Sbjct: 48 QELKEAFALLDKDGDGNIGREDVKTMLTSLNQDASEDSINHMFESI----NPPINLAAFL 103
Query: 489 TMMTS 503
T M S
Sbjct: 104 TAMGS 108
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = +1
Query: 103 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 240
EAFS FD G I + + S+G E++ ++ + G
Sbjct: 121 EAFSTFDDTQSGKIPISTMRDALSSMGDRMDPQEVESILRSYTSHG 166
>SPAC1687.14c |||EF hand family protein, unknown
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 76
Score = 46.0 bits (104), Expect = 6e-06
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +3
Query: 276 MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADID 455
M+ K + +EE EAF +FD G+I +LR LGE LT E++ M+ D+
Sbjct: 1 MSVSTKRLEMDEEAEEAFDLFDVTHKGYIDFEDLRRSCAQLGENLTKEQLQLML---DLA 57
Query: 456 G-DGQVNYEEFVTM 494
G +G+V+ EEF +
Sbjct: 58 GTNGKVSREEFAEL 71
Score = 33.5 bits (73), Expect = 0.036
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1
Query: 82 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 240
E E +EAF LFD G I ++L LG+N T+ +LQ M++ +G
Sbjct: 9 EMDEEAEEAFDLFDVTHKGYIDFEDLRRSCAQLGENLTKEQLQLMLDLAGTNG 61
>SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 614
Score = 35.9 bits (79), Expect = 0.007
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +3
Query: 276 MARKMKDTDSEE--EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 449
+ +K + +EE + + F D DG G++ + +K + +EV E IRE +
Sbjct: 6 LQKKYPELTNEEILTLTDQFNKLDVDGKGYLDQPTTIKAFED-SKKGSYDEVREAIREVN 64
Query: 450 IDGDGQVNYEEFV 488
+D G+V E+FV
Sbjct: 65 VDSSGRVEPEDFV 77
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 205 LQDMINEVDADGNGTIDFPSS 267
L D N++D DG G +D P++
Sbjct: 21 LTDQFNKLDVDGKGYLDQPTT 41
>SPBC11G11.02c |end3||actin cortical patch component End3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 375
Score = 35.5 bits (78), Expect = 0.009
Identities = 19/68 (27%), Positives = 39/68 (57%)
Frame = +3
Query: 294 DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 473
D + + E FR + + NG++S ++ V+ + KL+ ++++++ ADID DG +
Sbjct: 2 DPQEKNKYWEIFRGLNPE-NGYLSGSKAAGVLRS--SKLSSDKLEKIWDLADIDDDGMFD 58
Query: 474 YEEFVTMM 497
++EF M
Sbjct: 59 FDEFAIAM 66
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 32.3 bits (70), Expect = 0.083
Identities = 19/80 (23%), Positives = 40/80 (50%)
Frame = +3
Query: 330 RVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSKW 509
R+ D G IS A ++ ++ + +++ D + IR ++G + EE T+M S
Sbjct: 315 RLVDLIDRGRISLANIKFLVLDEADRMLDMGFEPQIRHI-VEGADMTSVEERQTLMFSAT 373
Query: 510 PPASVCVKSREFKYTFCFMT 569
P + + +R+F + F++
Sbjct: 374 FPRDIQLLARDFLKDYVFLS 393
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 31.9 bits (69), Expect = 0.11
Identities = 17/72 (23%), Positives = 35/72 (48%)
Frame = +3
Query: 327 FRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 506
F VFD D NG+I E ++ ++++ + D+D +G ++Y+E + ++ +
Sbjct: 69 FNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAI 128
Query: 507 WPPASVCVKSRE 542
+ VK E
Sbjct: 129 YKMVGSMVKLPE 140
Score = 29.9 bits (64), Expect = 0.44
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Frame = +3
Query: 255 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGE------KLTD 416
F EF+ ++ + + +++ AF+++D D NG IS E+ ++ + + KL +
Sbjct: 82 FKEFICALSVTSRG-ELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPE 140
Query: 417 EE------VDEMIREADIDGDGQVNYEEF 485
+E V+++ D + DGQ+ EEF
Sbjct: 141 DEDTPEKRVNKIFNMMDKNKDGQLTLEEF 169
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 31.1 bits (67), Expect = 0.19
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = -2
Query: 461 VAVDIGLANHLVDLLVSEFLSEVGHDVAQLGRGDEAVAVLVEDAE 327
V++ I L ++ L+ FLSE + +G+ DEA+ V+ ++AE
Sbjct: 180 VSIGINLLWGIITLVGVSFLSESPRYLVSIGKDDEAIQVMCKNAE 224
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 29.5 bits (63), Expect = 0.58
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -2
Query: 461 VAVDIGLANHLVDLLVSEFLSEVGHDVAQLGRGDEAVAVLVEDAEGLAD 315
V++ I L ++ ++ FL E + Q+G+ +EAV VL E AE D
Sbjct: 184 VSIGINLLWGIITMIGILFLPESPRYLIQVGKDEEAVRVLSESAELFPD 232
>SPCC1183.11 ||SPCC31H12.01|MS ion channel protein
1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1011
Score = 28.3 bits (60), Expect = 1.4
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 67 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEV 228
D+ E A + +S+FD+D +G IT +E+ +G + A L+D+ + +
Sbjct: 538 DETGEVDNATLEACYSIFDRDLNGDITCEEIELACVEIGKERKSISASLRDLNDSI 593
>SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 384 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 482
V + E+ +EE DEM E D +G+G EE
Sbjct: 170 VQPDADEEEEEEEADEMEEEFDEEGEGDEEEEE 202
>SPCC162.06c |||vacuolar sorting protein Vps60|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 210
Score = 27.1 bits (57), Expect = 3.1
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +3
Query: 279 ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADID 455
AR++K I + ++ D+ + +A EL V LG+ +TD VDE +A+++
Sbjct: 113 ARQLKSQSKNVSIEKIEKLQDEIQDYMDAAGELNEV---LGQNMTDINVDEEELDAELE 168
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 26.6 bits (56), Expect = 4.1
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Frame = +3
Query: 336 FDKDGNGFISAAELRH--------VMTNLGEKLTDEEVDEMIREAD 449
FD D NG ++ + L +TN +L+ EE+D M+ EA+
Sbjct: 476 FDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVSEAE 521
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 26.6 bits (56), Expect = 4.1
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -3
Query: 211 LEVRLLWGSVLATSSRCPALWS*WCHR 131
LE++ WGS+ A + +W+ W R
Sbjct: 850 LEMKNYWGSISALCDKMSEIWADWVQR 876
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 26.6 bits (56), Expect = 4.1
Identities = 20/82 (24%), Positives = 34/82 (41%)
Frame = +1
Query: 22 FFSVAPDNPS*STMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA 201
FF++ D + A++ T + F E+F + D + SL + T
Sbjct: 845 FFTIKADESAAQATANRETHGRQKLF-ESFGVLDSSNSVADSDSTNYDDENSLNRGGTSE 903
Query: 202 ELQDMINEVDADGNGTIDFPSS 267
+ I +VD +G+I FP S
Sbjct: 904 SDSEFIWDVDESNSGSIVFPKS 925
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 26.6 bits (56), Expect = 4.1
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Frame = +3
Query: 336 FDKDGNGFISAAELRH--------VMTNLGEKLTDEEVDEMIREAD 449
FD D NG ++ + L +TN +L+ EE+D M+ EA+
Sbjct: 476 FDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVAEAE 521
>SPBC1773.16c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 595
Score = 26.2 bits (55), Expect = 5.5
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +3
Query: 210 RHDQ*SRRGRKRHDRFPEFLTMMARKMKDTDSEEEIRE---AFRVFDKDGNGF 359
+HD +R + ++R+P T ++ D D E EI E A + DK + F
Sbjct: 41 KHD--NRAAVQENERYPILYTPLSTSDHDNDEENEINELKNAVKALDKRFDNF 91
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 26.2 bits (55), Expect = 5.5
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +3
Query: 228 RRGRKRHDRFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG 350
RR R RHDR +FL + A D D EE E + +DG
Sbjct: 134 RRKRARHDRRNQFLDIEAE--VDEDEEELEDEEDEIGREDG 172
>SPBC530.06c |||translation initiation factor eIF3 alpha subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2
Query: 473 IDLAVAVDIGLANHLVDLLVSEFLSEVGHDVAQL 372
+D++V +D+ +H L S LS HDV Q+
Sbjct: 28 VDVSVDIDVIFPDHTQTLSFSLLLSNTIHDVRQV 61
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 103 EAFSLFDKDGDGTITTKELGTVMR 174
+ F FD+D DG + +EL + R
Sbjct: 311 DLFYQFDRDNDGALNNEELSALFR 334
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,600,169
Number of Sequences: 5004
Number of extensions: 44474
Number of successful extensions: 179
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 390427050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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