Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40561
         (732 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0130 - 1007433-1007712,1007739-1007803,1007804-1008001,100...    30   2.2  
12_01_0065 - 558521-558675,558765-558835,558914-558998,559366-55...    29   5.0  
10_08_0683 - 19860777-19861070,19861677-19861874,19862498-198626...    28   8.8  
07_01_0587 - 4362843-4362977,4363072-4363131,4363228-4363305,436...    28   8.8  

>03_01_0130 -
           1007433-1007712,1007739-1007803,1007804-1008001,
           1008103-1008273,1008405-1008553,1008780-1008927,
           1009015-1009083,1009168-1009416,1009516-1009710,
           1009869-1009985,1010205-1011329
          Length = 921

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = +1

Query: 334 KEEGSHGPISIDKAREIANLYNSNRLESTEETLPMWILTTPTDQIKALLLYVQ 492
           K+ G++  I I+ A +IAN   +N   S    +PMW    PT      +LY Q
Sbjct: 632 KDVGANNLIPIEIALKIANKIYANERFSAYIVIPMWPEGNPTGAPTQRILYWQ 684


>12_01_0065 -
           558521-558675,558765-558835,558914-558998,559366-559484,
           559570-559718,560116-560157,560413-560484,560788-560897,
           561446-561535,561633-561747
          Length = 335

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +1

Query: 322 QLWAKEEGSHGPISIDKAREIANLYNSNRLESTEETLP 435
           Q+W   +G    +  +  REI +LY++ +++S EE  P
Sbjct: 153 QIWRSRKGDRNEVD-ESLREICHLYDAVQVDSDEEKHP 189


>10_08_0683 -
           19860777-19861070,19861677-19861874,19862498-19862659,
           19862763-19862911,19863089-19863236,19863317-19863385,
           19863471-19863719,19863937-19864131,19864444-19864560,
           19864978-19866537
          Length = 1046

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +1

Query: 334 KEEGSHGPISIDKAREIANLYNSNRLESTEETLPMWILTTPTDQIKALLLYVQ 492
           K+ G++  I I+ A +IAN   +    S    +PMW    PT      +LY Q
Sbjct: 777 KDIGANNLIPIEIALKIANKIKAKERFSAYIVIPMWPEGNPTGAPTQRILYWQ 829


>07_01_0587 -
           4362843-4362977,4363072-4363131,4363228-4363305,
           4363552-4363629,4363950-4364026,4364416-4364590,
           4364698-4364844,4365477-4365716
          Length = 329

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +1

Query: 334 KEEGSHGPISIDKAREIANLYNSNRLESTEETLPMWILTTPTDQIKAL 477
           KE G HG +  D   E  N+  S   ++  E + +   TTPT++++ +
Sbjct: 182 KEAGVHGLVVPDVPLEETNILRSEAAKNNLELVLLTTPTTPTERMEKI 229


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,084,667
Number of Sequences: 37544
Number of extensions: 292667
Number of successful extensions: 688
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)