Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40556
         (745 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5IY17 Cluster: Riboflavin biosynthesis protein; n=1; M...    36   0.80 
UniRef50_Q4XQG3 Cluster: Putative uncharacterized protein; n=1; ...    36   1.4  
UniRef50_Q4A9X3 Cluster: Putative uncharacterized protein; n=6; ...    34   4.2  
UniRef50_A6LGU3 Cluster: Peptidyl-prolyl cis-trans isomerase; n=...    34   4.2  
UniRef50_A6F693 Cluster: Putative uncharacterized protein; n=1; ...    34   4.2  
UniRef50_O01863 Cluster: Putative uncharacterized protein; n=2; ...    33   7.4  
UniRef50_A0C9Y5 Cluster: Chromosome undetermined scaffold_16, wh...    33   9.8  

>UniRef50_A5IY17 Cluster: Riboflavin biosynthesis protein; n=1;
           Mycoplasma agalactiae|Rep: Riboflavin biosynthesis
           protein - Mycoplasma agalactiae
          Length = 295

 Score = 36.3 bits (80), Expect = 0.80
 Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
 Frame = +3

Query: 537 SYNFYPYIYCNRIAKT-ELTSTINIIKMKTILHYFYTETTPIIFYGILFMNLIIDAFQVL 713
           +Y+F  YI  N I K+ +LT+  NII +K  ++  Y E   + +Y +L  N  ID +++ 
Sbjct: 183 TYSFSAYITFNDITKSIKLTTDSNIIPLKDGIYLSYVEINEMTYYAVLKAN--IDNYEIK 240

Query: 714 IL 719
            L
Sbjct: 241 FL 242


>UniRef50_Q4XQG3 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 86

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
 Frame = +3

Query: 507 FVQNFLHTFLSYNFYPYIYCNRIAKTELTSTINIIKMKTILHYFYTETTPIIFY-GILFM 683
           F+ +FL+T +S  F    Y N I   E + +INI  +    HYFY    P   Y  I F+
Sbjct: 11  FILHFLYTHISTRFNKNTYINCIY-LEKSPSINISSLVFFFHYFYIILFPYFKYTPISFI 69

Query: 684 NLIIDAFQVLILFKY 728
           +   D +  L ++ Y
Sbjct: 70  SYWHDCYGFLKMYIY 84


>UniRef50_Q4A9X3 Cluster: Putative uncharacterized protein; n=6;
           Bacteria|Rep: Putative uncharacterized protein -
           Mycoplasma hyopneumoniae (strain J / ATCC 25934 / NCTC
           10110)
          Length = 426

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
 Frame = +3

Query: 507 FVQNFLHTFL-SYNFYPYIYCNRIAKTELTSTINIIKMKTILHYFYTETTPIIFYGILFM 683
           F+ NF  +FL  + F+  I  N++    L   +N I++ +I       T P+IFY I F+
Sbjct: 226 FLFNFAVSFLRGFIFWSLIEINKLF---LNKKLNKIELLSISGIVILSTNPLIFYSIGFV 282

Query: 684 NLIIDAFQVLILFKYNF 734
                +F +LI+ + +F
Sbjct: 283 LTFTISFVILIINQISF 299


>UniRef50_A6LGU3 Cluster: Peptidyl-prolyl cis-trans isomerase; n=1;
           Parabacteroides distasonis ATCC 8503|Rep:
           Peptidyl-prolyl cis-trans isomerase - Parabacteroides
           distasonis (strain ATCC 8503 / DSM 20701 / NCTC11152)
          Length = 172

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -2

Query: 117 SSLNCLTIIYNIFRTAKMREYLYYNALLSCLYKAKFI 7
           S  N   I+Y + +T + +E +YY + + C YK  FI
Sbjct: 55  SQSNAGFILYKVLKTGESKEPIYYTSKVECYYKGTFI 91


>UniRef50_A6F693 Cluster: Putative uncharacterized protein; n=1;
           Moritella sp. PE36|Rep: Putative uncharacterized protein
           - Moritella sp. PE36
          Length = 395

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +3

Query: 558 IYCNRIAKTELTS-TINIIKMKTILHYFYTETTPIIFYGILFMNLIIDAFQVLILFKYNF 734
           +Y N +   + TS + +II+ K    YF+       F G+  + ++ ++  +  LF Y F
Sbjct: 262 LYMNYVVNIDFTSVSSSIIRFKLWSDYFWPNILDNFFLGVGTVPIVTESLIIFFLFVYGF 321

Query: 735 IG 740
           +G
Sbjct: 322 VG 323


>UniRef50_O01863 Cluster: Putative uncharacterized protein; n=2;
            Caenorhabditis|Rep: Putative uncharacterized protein -
            Caenorhabditis elegans
          Length = 1184

 Score = 33.1 bits (72), Expect = 7.4
 Identities = 19/80 (23%), Positives = 38/80 (47%)
 Frame = +3

Query: 456  LPVVAPESVLVISTCTHFVQNFLHTFLSYNFYPYIYCNRIAKTELTSTINIIKMKTILHY 635
            LP++   S  ++++  H    FL T  + +F P     RIA    +    + K+KT+  +
Sbjct: 947  LPIIFTHSQTILTSFLHIPVLFLGTLFT-SFEPKSKIIRIAPKNSSEIPKVEKLKTVSQF 1005

Query: 636  FYTETTPIIFYGILFMNLII 695
             +      ++  ILF+ L++
Sbjct: 1006 IWQFVPSAVYINILFLILLM 1025


>UniRef50_A0C9Y5 Cluster: Chromosome undetermined scaffold_16, whole
            genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_16, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 1088

 Score = 32.7 bits (71), Expect = 9.8
 Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = +3

Query: 483  LVISTC--THFVQNFLHTFLSYNFYPYIYCNRIAKTELTSTINIIKMKTILHYFYTETTP 656
            L +S C   H ++N L  F+ Y FYP++Y  + +K  +     + + +  + +   + T 
Sbjct: 1010 LEVSNCYNKHLIEN-LSRFIKYLFYPFVYIKKYSKLNVDEDHKLERQRKTMSFSKKKATV 1068

Query: 657  II 662
            +I
Sbjct: 1069 VI 1070


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 643,872,932
Number of Sequences: 1657284
Number of extensions: 12429714
Number of successful extensions: 26780
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 25641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26770
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60911752460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)