Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40553
         (805 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q89ZT0 Cluster: Putative uncharacterized protein; n=2; ...    38   0.30 
UniRef50_A2QDV0 Cluster: Remark: the S. Pombe protein is approxi...    35   2.8  
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    33   6.4  
UniRef50_O27414 Cluster: Ferrous iron transport protein B; n=1; ...    33   6.4  
UniRef50_A4R4Z6 Cluster: Predicted protein; n=1; Magnaporthe gri...    33   8.4  

>UniRef50_Q89ZT0 Cluster: Putative uncharacterized protein; n=2;
           Bacteroides thetaiotaomicron|Rep: Putative
           uncharacterized protein - Bacteroides thetaiotaomicron
          Length = 345

 Score = 37.9 bits (84), Expect = 0.30
 Identities = 22/61 (36%), Positives = 32/61 (52%)
 Frame = +3

Query: 60  VLRSQYSYNGYLTLRTETHYCFTAEIGRVVVPTRADSQEVLPPVNSQEVLPPVIAEEEVR 239
           VL   Y  N Y T +T T+Y +T+    +V+P  + S EV  P N+ +V P  I    VR
Sbjct: 169 VLLRIYKENYYATTKTSTYYNYTSST--IVIPNPSGSPEVRRPTNANQVFP--IGANSVR 224

Query: 240 L 242
           +
Sbjct: 225 M 225


>UniRef50_A2QDV0 Cluster: Remark: the S. Pombe protein is
           approximately only the half of the lentgh; n=13;
           Pezizomycotina|Rep: Remark: the S. Pombe protein is
           approximately only the half of the lentgh - Aspergillus
           niger
          Length = 1008

 Score = 34.7 bits (76), Expect = 2.8
 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +2

Query: 380 GLTPAAPRPGTPLWRSSQ-KNIFLDCSLQCNIFKLFNSTNLSVIYFNGW 523
           G + A+P PG   W   +  N+FLD SL    F L  ST++ + Y  GW
Sbjct: 798 GSSVASPHPGPSAWMDERSNNVFLDPSLTLP-FSLPTSTDMLISYGAGW 845


>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 33.5 bits (73), Expect = 6.4
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = +1

Query: 13  PIDIYNVNAPPTSRYKF 63
           P  +Y+VNAPPTSRYKF
Sbjct: 175 PRHLYDVNAPPTSRYKF 191


>UniRef50_O27414 Cluster: Ferrous iron transport protein B; n=1;
           Methanothermobacter thermautotrophicus str. Delta H|Rep:
           Ferrous iron transport protein B - Methanobacterium
           thermoautotrophicum
          Length = 661

 Score = 33.5 bits (73), Expect = 6.4
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +2

Query: 443 FLDCSLQCNIFKLFNSTNLSVIYFNGWVTGFIRLTGITTELARRRYINQ 589
           F+ CS +  ++ LF S    +IY  GWV  F+ + GI   +   R + +
Sbjct: 419 FMSCSARLPVYVLFTSALFPLIY-QGWVIFFLYILGIAVAIITARLLGE 466


>UniRef50_A4R4Z6 Cluster: Predicted protein; n=1; Magnaporthe
           grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
           blast fungus) (Pyricularia grisea)
          Length = 311

 Score = 33.1 bits (72), Expect = 8.4
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +2

Query: 128 GGNRQGGGTYSCGLPRGPTTSELPRGP 208
           GG+  G G    GLP+GP    LPRGP
Sbjct: 282 GGSGGGSGRSGGGLPQGPRAGGLPRGP 308


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 834,037,389
Number of Sequences: 1657284
Number of extensions: 17702546
Number of successful extensions: 52825
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 50049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52794
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69143070360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)