Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40553
         (805 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       24   4.8  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    24   6.3  
AF269155-1|AAF91400.1|   59|Anopheles gambiae transcription fact...    24   6.3  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   8.3  

>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +3

Query: 114  HYCFTAEIGRVVVPTRADSQEVLP-PVN 194
            H  F AEIG  +V    DS E+LP P N
Sbjct: 939  HIEFHAEIGMSLVLKVGDSSEMLPAPAN 966


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 92  PHPSNRNALLLHGGNRQGGGTYS 160
           P PS+ +    HGG   GGG Y+
Sbjct: 220 PAPSHLSDHSSHGGTSGGGGCYA 242


>AF269155-1|AAF91400.1|   59|Anopheles gambiae transcription factor
           Deformed protein.
          Length = 59

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +3

Query: 27  QRKCATHLEI*VLRSQYSYNGYLTLRTETHYCFT 128
           QR   T  +I  L  ++ YN YLT R       T
Sbjct: 4   QRTAYTRHQILELEKEFHYNXYLTRRRRIEIAHT 37


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 664 KTLRILSVNLRGKILDCAS*KGRP 593
           KTLR+L++N +G + D    K  P
Sbjct: 812 KTLRVLTINHKGNLNDTEVQKSLP 835


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 865,493
Number of Sequences: 2352
Number of extensions: 19167
Number of successful extensions: 31
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84823812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)