Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40553
         (805 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003496-1|AAO39500.1|  439|Drosophila melanogaster RE48339p pro...    30   4.3  
AF131124-1|AAF36489.1|  428|Drosophila melanogaster homogentisat...    30   4.3  
AE014134-2039|AAF53078.2|  439|Drosophila melanogaster CG4779-PA...    30   4.3  
AE014297-2102|AAF55245.1|  254|Drosophila melanogaster CG14877-P...    29   9.8  

>BT003496-1|AAO39500.1|  439|Drosophila melanogaster RE48339p
           protein.
          Length = 439

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -2

Query: 519 PLKYITDKFVELNSLKILHCKEQSKNIFFCDDLHSG 412
           P KY   KF+ +NS+   HC      +  C  L +G
Sbjct: 274 PFKYDLSKFMVINSVSFDHCDPSIFTVLTCPSLRAG 309


>AF131124-1|AAF36489.1|  428|Drosophila melanogaster homogentisate
           1,2-dioxygenase protein.
          Length = 428

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -2

Query: 519 PLKYITDKFVELNSLKILHCKEQSKNIFFCDDLHSG 412
           P KY   KF+ +NS+   HC      +  C  L +G
Sbjct: 263 PFKYDLSKFMVINSVSFDHCDPSIFTVLTCPSLRAG 298


>AE014134-2039|AAF53078.2|  439|Drosophila melanogaster CG4779-PA
           protein.
          Length = 439

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -2

Query: 519 PLKYITDKFVELNSLKILHCKEQSKNIFFCDDLHSG 412
           P KY   KF+ +NS+   HC      +  C  L +G
Sbjct: 274 PFKYDLSKFMVINSVSFDHCDPSIFTVLTCPSLRAG 309


>AE014297-2102|AAF55245.1|  254|Drosophila melanogaster CG14877-PA
           protein.
          Length = 254

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 406 GPRCGWRKALLSKFTIARNPRGTLLLSIDGGT 311
           GP C +  A +S+ T   N +GT L+S+ G T
Sbjct: 116 GPVCDYSLAAVSRITKYFNSQGTPLISVGGST 147


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,851,014
Number of Sequences: 53049
Number of extensions: 861395
Number of successful extensions: 2864
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2864
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3757402116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)