Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40549
(540 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle pr... 36 3e-04
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 29 0.023
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 27 0.16
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 26 0.28
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 26 0.28
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 26 0.28
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 26 0.28
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 26 0.28
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 26 0.28
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 26 0.28
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 26 0.28
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 24 0.86
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 22 3.5
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 21 6.1
DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein. 21 8.1
>EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle
protein protein.
Length = 138
Score = 35.9 bits (79), Expect = 3e-04
Identities = 22/55 (40%), Positives = 30/55 (54%)
Frame = +1
Query: 85 IVRSEFDASPDGAYNYNFETSNGIVRTNTGELKEALDDDNKPHVIVAVRGSYSYT 249
I + + + DG Y NFETSNGI +G+ K+ D+ P V +GS SYT
Sbjct: 29 ITSQQLEVNFDGNYINNFETSNGISHQESGQPKQV--DNETP---VVSQGSDSYT 78
Score = 32.7 bits (71), Expect = 0.002
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 255 DGKPETITYFADETGYHAQGESIP 326
DG+ +ITY ADE G+ QG IP
Sbjct: 81 DGQQVSITYVADENGFQVQGSHIP 104
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 29.5 bits (63), Expect = 0.023
Identities = 13/52 (25%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 193 DDDNKPHVIVAVRGSYSYTNTTANLKPLRTSLTRLDTM-LRVNLFLRSPPPR 345
+ +P +I ++ +Y+Y N N KPL ++ ++ + + V ++ + PPR
Sbjct: 307 EKSKEPKIISSLSNNYNYNNYNNNYKPLYYNIINIEQIPVPVPIYCGNFPPR 358
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 26.6 bits (56), Expect = 0.16
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = +1
Query: 193 DDDNKPHVIVAVRGSYSYTNTTANLKPLRTSLTRLD 300
+ +P +I ++ +Y+Y N N KPL ++ ++
Sbjct: 307 EKSKEPKIISSLSNNYNYNNYNNNYKPLHYNINYIE 342
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 25.8 bits (54), Expect = 0.28
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = +1
Query: 193 DDDNKPHVIVAVRGSYSYTNTTANLKPLRTSLTRLD 300
+ +P +I ++ +Y+Y N N KPL ++ ++
Sbjct: 74 EKSKEPKIISSLSNNYNYNNYNNNYKPLYYNINYIE 109
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 25.8 bits (54), Expect = 0.28
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = +1
Query: 193 DDDNKPHVIVAVRGSYSYTNTTANLKPLRTSLTRLD 300
+ +P +I ++ +Y+Y N N KPL ++ ++
Sbjct: 74 EKSKEPKIISSLSNNYNYNNYNNNYKPLYYNINYIE 109
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 25.8 bits (54), Expect = 0.28
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = +1
Query: 193 DDDNKPHVIVAVRGSYSYTNTTANLKPLRTSLTRLD 300
+ +P +I ++ +Y+Y N N KPL ++ ++
Sbjct: 74 EKSKEPKIISSLSNNYNYNNYNNNYKPLYYNINYIE 109
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 25.8 bits (54), Expect = 0.28
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = +1
Query: 193 DDDNKPHVIVAVRGSYSYTNTTANLKPLRTSLTRLD 300
+ +P +I ++ +Y+Y N N KPL ++ ++
Sbjct: 74 EKSKEPKIISSLSNNYNYNNYNNNYKPLYYNINYIE 109
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 25.8 bits (54), Expect = 0.28
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = +1
Query: 193 DDDNKPHVIVAVRGSYSYTNTTANLKPLRTSLTRLD 300
+ +P +I ++ +Y+Y N N KPL ++ ++
Sbjct: 307 EKSKEPKIISSLSNNYNYNNYNNNYKPLYYNINYIE 342
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 25.8 bits (54), Expect = 0.28
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = +1
Query: 193 DDDNKPHVIVAVRGSYSYTNTTANLKPLRTSLTRLD 300
+ +P +I ++ +Y+Y N N KPL ++ ++
Sbjct: 307 EKSKEPKIISSLSNNYNYNNYNNNYKPLYYNINYIE 342
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 25.8 bits (54), Expect = 0.28
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = +1
Query: 193 DDDNKPHVIVAVRGSYSYTNTTANLKPLRTSLTRLD 300
+ +P +I ++ +Y+Y N N KPL ++ ++
Sbjct: 307 EKSKEPKIISSLSNNYNYNNYNNNYKPLYYNINYIE 342
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 25.8 bits (54), Expect = 0.28
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = +1
Query: 193 DDDNKPHVIVAVRGSYSYTNTTANLKPLRTSLTRLD 300
+ +P +I ++ +Y+Y N N KPL ++ ++
Sbjct: 296 EKSKEPKIISSLSNNYNYNNYNNNYKPLYYNINYIE 331
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 24.2 bits (50), Expect = 0.86
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 142 TSNGIVRTNTGELKEAL 192
TS G R +TGE+KEA+
Sbjct: 403 TSKGEYRMSTGEMKEAI 419
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.2 bits (45), Expect = 3.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 259 ANLKPLRTSLTRLDTMLRVNLFLRS 333
A ++P + T ++RVNLF+RS
Sbjct: 45 ARIRPSGENATDGPAIVRVNLFVRS 69
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.4 bits (43), Expect = 6.1
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1
Query: 259 ANLKPLRTSLTRLDTMLRVNLFLRS 333
A ++P + T ++RVN+F+RS
Sbjct: 45 ARIRPSGENATDGPAVVRVNIFVRS 69
>DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein.
Length = 135
Score = 21.0 bits (42), Expect = 8.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 516 CACILKTQQIVKKN 475
C CILK I+ KN
Sbjct: 63 CECILKNFNILDKN 76
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,407
Number of Sequences: 438
Number of extensions: 2857
Number of successful extensions: 19
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15336375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -