Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40548
         (747 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    30   0.066
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   5.7  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    24   5.7  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      24   5.7  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    23   7.6  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 30.3 bits (65), Expect = 0.066
 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
 Frame = -3

Query: 592  LIHRHRESNARSDSSQSTNNNVPSKKILKK--KHLYDEATRRYKNKLNKKKPWNDRFFSI 419
            L+  H ++ A  D +    N +   ++++K  +H+++   R Y + L K+  WN    SI
Sbjct: 1606 LVGNHLQTVADVDIADVPTNRLNHWRLIQKHMQHIWNRWHREYLSTLQKRAKWNKNAISI 1665

Query: 418  *QPRL 404
               RL
Sbjct: 1666 EPGRL 1670


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
 Frame = +3

Query: 393 RHFDSRGCQIEKNLSF--HGFFL-FNLFLYLRVAS 488
           RH+ +R CQ  +++ F  H  +  +N F Y R  S
Sbjct: 423 RHYQTRRCQRSRSIYFDTHSLYCSYNRFRYRRYLS 457


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +3

Query: 387 FTRHFDSRGCQIEKNLSFHGFFLFNLFL 470
           F+RHFDSR  +++ +     F +  +F+
Sbjct: 629 FSRHFDSRSLRVDVDAQRSIFTMILIFM 656


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +1

Query: 436 HSMVFFYSICFCIFGLLHRTNVFFLIF 516
           H      S+C C+ GL+     FF ++
Sbjct: 182 HLFALTLSVCLCVGGLVVLLGAFFWVY 208


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 12/51 (23%), Positives = 23/51 (45%)
 Frame = -3

Query: 604 TRGVLIHRHRESNARSDSSQSTNNNVPSKKILKKKHLYDEATRRYKNKLNK 452
           T+  L  +HR      + ++    +   +K+L+KK     +TRR   K  +
Sbjct: 526 TKRDLTVQHRTGEWEREKAEKQFYHTARRKVLRKKGKKQRSTRRKAQKAGR 576


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 672,214
Number of Sequences: 2352
Number of extensions: 13722
Number of successful extensions: 63
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)