Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40548
         (747 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM231187-1|CAJ77183.1|  542|Homo sapiens autogenous vein graft r...    31   3.3  
BC101685-1|AAI01686.1|  402|Homo sapiens chromosome 6 open readi...    30   7.7  
BC101681-1|AAI01682.1|  402|Homo sapiens chromosome 6 open readi...    30   7.7  
BC038240-1|AAH38240.1|  402|Homo sapiens chromosome 6 open readi...    30   7.7  
AL390721-1|CAC69824.1|  402|Homo sapiens protein ( Human DNA seq...    30   7.7  
AK126213-1|BAC86488.1|  262|Homo sapiens protein ( Homo sapiens ...    30   7.7  

>AM231187-1|CAJ77183.1|  542|Homo sapiens autogenous vein graft
           remodeling associated protein 4 protein.
          Length = 542

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 12/26 (46%), Positives = 19/26 (73%), Gaps = 2/26 (7%)
 Frame = +1

Query: 424 KRICH--SMVFFYSICFCIFGLLHRT 495
           K +C   SM+F+Y++CFC+  L HR+
Sbjct: 406 KHLCALCSMMFYYNLCFCLHCLQHRS 431


>BC101685-1|AAI01686.1|  402|Homo sapiens chromosome 6 open reading
           frame 194 protein.
          Length = 402

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = -3

Query: 574 ESNARSDSSQSTNNNVPSKKILKKKHLYDEATRRYKNKLNKKK 446
           +SN+ SD++  ++++    K  KKK      T++ KNK  KK+
Sbjct: 205 DSNSESDTNSDSDDDKKRVKAKKKKKKKKHKTKKKKNKKTKKE 247


>BC101681-1|AAI01682.1|  402|Homo sapiens chromosome 6 open reading
           frame 194 protein.
          Length = 402

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = -3

Query: 574 ESNARSDSSQSTNNNVPSKKILKKKHLYDEATRRYKNKLNKKK 446
           +SN+ SD++  ++++    K  KKK      T++ KNK  KK+
Sbjct: 205 DSNSESDTNSDSDDDKKRVKAKKKKKKKKHKTKKKKNKKTKKE 247


>BC038240-1|AAH38240.1|  402|Homo sapiens chromosome 6 open reading
           frame 194 protein.
          Length = 402

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = -3

Query: 574 ESNARSDSSQSTNNNVPSKKILKKKHLYDEATRRYKNKLNKKK 446
           +SN+ SD++  ++++    K  KKK      T++ KNK  KK+
Sbjct: 205 DSNSESDTNSDSDDDKKRVKAKKKKKKKKHKTKKKKNKKTKKE 247


>AL390721-1|CAC69824.1|  402|Homo sapiens protein ( Human DNA
           sequence from clone RP11-424I5 on chromosome 6 Contains
           a novel gene, ESTs, STSs, GSSs and a CpG island.  ).
          Length = 402

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = -3

Query: 574 ESNARSDSSQSTNNNVPSKKILKKKHLYDEATRRYKNKLNKKK 446
           +SN+ SD++  ++++    K  KKK      T++ KNK  KK+
Sbjct: 205 DSNSESDTNSDSDDDKKRVKAKKKKKKKKHKTKKKKNKKTKKE 247


>AK126213-1|BAC86488.1|  262|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44225 fis, clone THYMU3006168. ).
          Length = 262

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = +1

Query: 400 LTAAVVKSKRIC-HSMVFFYS-ICFCIFGLLHRTNVFFLIFF*KGHCCLCFVSYRIARLI 573
           + A V    RIC H  +F Y+ +C C+   +H     ++  +   H C+    +R   + 
Sbjct: 149 MRAYVYSYTRICIHICIFIYTYVCMCVCSCIHVYTCVYIHIYIGMHICVYSYMHRYTYVY 208

Query: 574 LCVY 585
           + +Y
Sbjct: 209 IHIY 212


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,410,051
Number of Sequences: 237096
Number of extensions: 1687598
Number of successful extensions: 3750
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3718
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)