Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40548
         (747 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    25   1.00 
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    23   2.3  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    23   2.3  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    23   2.3  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    23   2.3  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    22   7.0  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    22   7.0  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     21   9.3  

>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 24.6 bits (51), Expect = 1.00
 Identities = 14/62 (22%), Positives = 23/62 (37%)
 Frame = -3

Query: 616 LSNNTRGVLIHRHRESNARSDSSQSTNNNVPSKKILKKKHLYDEATRRYKNKLNKKKPWN 437
           L  NTR    H     N  +D+  + N N  ++    +        R+  N+ N  K   
Sbjct: 413 LMRNTRCGRYHNQNAGNQNADNQNADNQNANNQNADNQNANKQNGNRQNDNRQNDNKQNG 472

Query: 436 DR 431
           +R
Sbjct: 473 NR 474


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 145 YVGISRPVNSCMYRVL*NPV 204
           YVG  RP+++ +YR   NPV
Sbjct: 386 YVGRKRPMHNVVYRPGENPV 405


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 145 YVGISRPVNSCMYRVL*NPV 204
           YVG  RP+++ +YR   NPV
Sbjct: 355 YVGRKRPMHNVVYRPGENPV 374


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 145 YVGISRPVNSCMYRVL*NPV 204
           YVG  RP+++ +YR   NPV
Sbjct: 406 YVGRKRPMHNVVYRPGENPV 425


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 145 YVGISRPVNSCMYRVL*NPV 204
           YVG  RP+++ +YR   NPV
Sbjct: 355 YVGRKRPMHNVVYRPGENPV 374


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +1

Query: 400 LTAAVVKSKRICHSMVFFYSICFCIFGLLHRTNVFFLIF 516
           L  +V  S+R+C  +V    +   +  + H TN F L F
Sbjct: 10  LLYSVAMSQRLCIQLVVGPYVIGLMNTMTHTTNAFCLPF 48


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +1

Query: 400 LTAAVVKSKRICHSMVFFYSICFCIFGLLHRTNVFFLIF 516
           L  +V  S+R+C  +V    +   +  + H TN F L F
Sbjct: 9   LLYSVAMSQRLCIQLVVGPYVIGLMNTMTHTTNAFCLPF 47


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = +2

Query: 410 RLSNRKESVIPWFFFIQFVFVSSGCFIVQMXXXXXXXRR 526
           R  N K S +P+F F  F F +    +++        RR
Sbjct: 212 RFHNDKYSNVPYFLFGDFNFRTDTAGVIKKLTEDTQERR 250


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,365
Number of Sequences: 438
Number of extensions: 4017
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)