Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40547
         (411 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069440-1|AAL39585.1|  664|Drosophila melanogaster LD15107p pro...    34   0.084
AE014297-12|AAF52169.1| 1165|Drosophila melanogaster CG1107-PB, ...    34   0.084
AE014297-11|AAF52168.1| 1165|Drosophila melanogaster CG1107-PA, ...    34   0.084
AY051497-1|AAK92921.1|  566|Drosophila melanogaster GH15053p pro...    27   7.3  
AE014298-470|AAF45830.1|  327|Drosophila melanogaster CG14418-PA...    27   7.3  
AE014297-631|AAF54003.2|  566|Drosophila melanogaster CG2505-PA ...    27   7.3  
AY060846-1|AAL28394.1|  425|Drosophila melanogaster GM02567p pro...    27   9.7  
AE014296-2446|AAF49689.1|  425|Drosophila melanogaster CG5114-PA...    27   9.7  

>AY069440-1|AAL39585.1|  664|Drosophila melanogaster LD15107p
           protein.
          Length = 664

 Score = 33.9 bits (74), Expect = 0.084
 Identities = 18/41 (43%), Positives = 22/41 (53%)
 Frame = +2

Query: 146 WLPA*QPSVPKAAFAVLLAMAYIVPRAVTSPSFISSPPPKA 268
           W+PA     P A F+  L  A ++   VT PS  SSPPP A
Sbjct: 227 WMPAKPKRSPAALFSSDLEYAEMLDNFVTKPSTRSSPPPGA 267


>AE014297-12|AAF52169.1| 1165|Drosophila melanogaster CG1107-PB,
           isoform B protein.
          Length = 1165

 Score = 33.9 bits (74), Expect = 0.084
 Identities = 18/41 (43%), Positives = 22/41 (53%)
 Frame = +2

Query: 146 WLPA*QPSVPKAAFAVLLAMAYIVPRAVTSPSFISSPPPKA 268
           W+PA     P A F+  L  A ++   VT PS  SSPPP A
Sbjct: 728 WMPAKPKRSPAALFSSDLEYAEMLDNFVTKPSTRSSPPPGA 768


>AE014297-11|AAF52168.1| 1165|Drosophila melanogaster CG1107-PA,
           isoform A protein.
          Length = 1165

 Score = 33.9 bits (74), Expect = 0.084
 Identities = 18/41 (43%), Positives = 22/41 (53%)
 Frame = +2

Query: 146 WLPA*QPSVPKAAFAVLLAMAYIVPRAVTSPSFISSPPPKA 268
           W+PA     P A F+  L  A ++   VT PS  SSPPP A
Sbjct: 728 WMPAKPKRSPAALFSSDLEYAEMLDNFVTKPSTRSSPPPGA 768


>AY051497-1|AAK92921.1|  566|Drosophila melanogaster GH15053p
           protein.
          Length = 566

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = -3

Query: 403 VRSGFYLAKVPVCVPVHSLSHCHFPSRHRRLFIKLW 296
           VRS    A  PV  P +   HC  P RH+ L  + W
Sbjct: 304 VRSFLLFAFGPVIEP-YETDHCVVPKRHKDLLSEAW 338


>AE014298-470|AAF45830.1|  327|Drosophila melanogaster CG14418-PA
           protein.
          Length = 327

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 16/52 (30%), Positives = 28/52 (53%)
 Frame = -2

Query: 179 LSGQTVAKLGATSSDTARKHEKTGVHVIMSAPRRRHQLH*IIPSCTSNDVVQ 24
           +SGQTVA L +++S   +   K    +I++AP ++ QL    P    +  +Q
Sbjct: 26  VSGQTVAPLTSSTSAPPKMEVKPTKPMIVNAPPKKVQLTEAAPKSNGSKPLQ 77


>AE014297-631|AAF54003.2|  566|Drosophila melanogaster CG2505-PA
           protein.
          Length = 566

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = -3

Query: 403 VRSGFYLAKVPVCVPVHSLSHCHFPSRHRRLFIKLW 296
           VRS    A  PV  P +   HC  P RH+ L  + W
Sbjct: 304 VRSFLLFAFGPVIEP-YETDHCVVPKRHKDLLSEAW 338


>AY060846-1|AAL28394.1|  425|Drosophila melanogaster GM02567p
           protein.
          Length = 425

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 319 RRLFIKLWERSKILMLWCFWRR 254
           R +  K+WE S   M W FW R
Sbjct: 164 RPILTKIWEYSMSDMSWLFWHR 185


>AE014296-2446|AAF49689.1|  425|Drosophila melanogaster CG5114-PA
           protein.
          Length = 425

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 319 RRLFIKLWERSKILMLWCFWRR 254
           R +  K+WE S   M W FW R
Sbjct: 164 RPILTKIWEYSMSDMSWLFWHR 185


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,339,373
Number of Sequences: 53049
Number of extensions: 388778
Number of successful extensions: 1350
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1350
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1209331668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)