Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40546
(795 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 131 1e-31
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 121 1e-28
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 113 3e-26
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 105 1e-23
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 98 1e-21
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 87 2e-18
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 75 1e-14
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 54 2e-08
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 35 0.015
SPBP8B7.07c |set6||histone lysine methyltransferase Set6 |Schizo... 27 3.1
SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25 |Sch... 27 3.1
SPBC887.10 |mcs4||two-component response regulator |Schizosaccha... 27 3.1
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 27 4.1
SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr 1||... 26 5.4
SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces pom... 26 5.4
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 26 7.1
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 26 7.1
SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase Sen1|... 25 9.4
SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharo... 25 9.4
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 131 bits (317), Expect = 1e-31
Identities = 62/95 (65%), Positives = 70/95 (73%)
Frame = +1
Query: 193 GLHFPSCHPQFHAARRGLHQPNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNG 372
G F PQF + NGTGGKSIYG KF DENF LKH PG+LSMANAG +TNG
Sbjct: 48 GSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNG 107
Query: 373 SQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIET 477
SQFFITTV T WLDG+HVVFG V EGM+VVK++E+
Sbjct: 108 SQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVES 142
Score = 102 bits (244), Expect = 7e-23
Identities = 46/68 (67%), Positives = 50/68 (73%)
Frame = +2
Query: 65 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGD 244
FFDV + PLG+IV +L DV PKT NFRALCTGEKG+GY GS FHRVIP FMLQGGD
Sbjct: 5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGD 64
Query: 245 FTNLTALG 268
FT G
Sbjct: 65 FTRGNGTG 72
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 121 bits (291), Expect = 1e-28
Identities = 56/94 (59%), Positives = 68/94 (72%)
Frame = +1
Query: 190 QGLHFPSCHPQFHAARRGLHQPNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTN 369
+G F P F + + +GTGGKSIYG++F DENF L H PG+LSMANAG D+N
Sbjct: 72 EGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSN 131
Query: 370 GSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 471
GSQFFITTVKT WLDG HVVFG V+ G ++VK+I
Sbjct: 132 GSQFFITTVKTPWLDGHHVVFGEVLSGYDIVKKI 165
Score = 97.1 bits (231), Expect = 3e-21
Identities = 45/73 (61%), Positives = 51/73 (69%)
Frame = +2
Query: 32 ANTGKMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHR 211
AN G V+FD+ D LG++ I L PKT ENFRAL TGEKGFGY+GSIFHR
Sbjct: 19 ANRGPKVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHR 78
Query: 212 VIPNFMLQGGDFT 250
VIPNFM+QGGD T
Sbjct: 79 VIPNFMIQGGDIT 91
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 113 bits (272), Expect = 3e-26
Identities = 52/73 (71%), Positives = 59/73 (80%)
Frame = +1
Query: 256 NGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 435
NGTGG+SIYG KFEDENF LKH P +LSMANAG +TNGSQFFITTV T LDG+HVVFG
Sbjct: 74 NGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFG 133
Query: 436 NVVEGMEVVKQIE 474
V++G V+ IE
Sbjct: 134 KVIQGKSTVRTIE 146
Score = 66.9 bits (156), Expect = 3e-12
Identities = 35/72 (48%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Frame = +2
Query: 65 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG----YKGSIFHRVIPNFML 232
+F +++D I EL +V PKT +NF +LC G + G YKGS FHRVI NFML
Sbjct: 6 YFKISIDGKIQPTIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNFML 65
Query: 233 QGGDFTNLTALG 268
QGGDFT G
Sbjct: 66 QGGDFTRGNGTG 77
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 105 bits (251), Expect = 1e-23
Identities = 47/75 (62%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
Frame = +1
Query: 256 NGTGGKSIYGNK-FEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVF 432
+GTG +I+ ++ F DENFTLKH PG+LSMANAG D+NG QFFITTV +LDG+HVVF
Sbjct: 78 DGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHVVF 137
Query: 433 GNVVEGMEVVKQIET 477
G V+EG ++VK+IE+
Sbjct: 138 GEVIEGYDIVKEIES 152
Score = 80.2 bits (189), Expect = 3e-16
Identities = 42/92 (45%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Frame = +2
Query: 56 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGE------KGFGYKGSIFHRVI 217
P VF D+ +D LG+I I L S + PKT ENFR CTGE K GYK S FHR+I
Sbjct: 5 PVVFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIGYKNSTFHRII 64
Query: 218 PNFMLQGGDFTNLTALGESPSTAISLKTRISP 313
FM+QGGDF + G+ +A +R P
Sbjct: 65 QGFMIQGGDFVS----GDGTGSATIFNSRTFP 92
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 97.9 bits (233), Expect = 1e-21
Identities = 44/72 (61%), Positives = 54/72 (75%), Gaps = 1/72 (1%)
Frame = +1
Query: 259 GTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 435
G GG SIYG+KF+DE + L HTG G+LSMANAG +TN SQFFIT T WLDG+H +FG
Sbjct: 61 GRGGTSIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFG 120
Query: 436 NVVEGMEVVKQI 471
VV G+ V K++
Sbjct: 121 RVVSGLSVCKRM 132
Score = 61.7 bits (143), Expect = 1e-10
Identities = 32/60 (53%), Positives = 42/60 (70%)
Frame = +2
Query: 95 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNLTALGES 274
LGKI+IEL ++ PKTC+NF L ++G+ Y G IFHRVIP+F++QGGD T G S
Sbjct: 10 LGKILIELYTEHAPKTCQNFYTLA--KEGY-YDGVIFHRVIPDFVIQGGDPTGTGRGGTS 66
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 87.4 bits (207), Expect = 2e-18
Identities = 41/74 (55%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Frame = +1
Query: 256 NGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVF 432
+GTGG+SI+ FEDE + LKH P +SMAN+G +TNGSQFFITT T WLDG+H +F
Sbjct: 513 DGTGGESIWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIF 572
Query: 433 GNVVEGMEVVKQIE 474
G++VV +IE
Sbjct: 573 ARAYAGLDVVHRIE 586
Score = 45.6 bits (103), Expect = 8e-06
Identities = 23/49 (46%), Positives = 30/49 (61%)
Frame = +2
Query: 98 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGD 244
G I I+L + PK +NF E G+ Y +IFHR+I NFM+QGGD
Sbjct: 464 GDISIKLYPEEAPKAVQNFTT--HAENGY-YDNTIFHRIIKNFMIQGGD 509
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 74.9 bits (176), Expect = 1e-14
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
Frame = +1
Query: 253 PNGTG--GKSIYGNKFEDENFT-LKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRH 423
P+GTG G+SI+G F+DE LKH G++SMAN G +TNGSQFFI LD +H
Sbjct: 331 PSGTGRGGQSIWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKH 390
Query: 424 VVFGNVVEGMEVVKQIE 474
+FG VV G+ V+ +E
Sbjct: 391 TIFGRVVGGLNVLDALE 407
Score = 44.0 bits (99), Expect = 3e-05
Identities = 25/59 (42%), Positives = 35/59 (59%)
Frame = +2
Query: 98 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNLTALGES 274
G+I IEL +D P NF L ++G+ Y+ +IFHR I FM+QGGD + G+S
Sbjct: 285 GEINIELHTDYAPHAVYNFVQLA--KQGY-YRNTIFHRNIARFMIQGGDPSGTGRGGQS 340
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 54.0 bits (124), Expect = 2e-08
Identities = 29/59 (49%), Positives = 35/59 (59%)
Frame = +2
Query: 98 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNLTALGES 274
G I IEL PK C NF LC +G+ Y G+I HRV+P F++QGGD T GES
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQGGDPTGTGMGGES 77
Score = 45.2 bits (102), Expect = 1e-05
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +1
Query: 259 GTGGKSIYGNKFEDENFT-LKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 435
G GG+SIYG F E L+ G++ MA + N SQFFIT T +G+ +FG
Sbjct: 72 GMGGESIYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFG 131
Query: 436 NVV 444
VV
Sbjct: 132 RVV 134
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 34.7 bits (76), Expect = 0.015
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = +2
Query: 86 DAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGD 244
+ +G +VI+L PKTCENF LC K Y F+ + N+ Q GD
Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENFLKLC---KLKYYNFCPFYNIQHNYTCQTGD 55
>SPBP8B7.07c |set6||histone lysine methyltransferase Set6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 27.1 bits (57), Expect = 3.1
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 74 VTVDDAPLGKIVIELRSDVTPKTCENFRALCT 169
V D+ P+GKI+I R D+ N C+
Sbjct: 19 VATDNIPIGKIIIRKRVDILSLDSANLTRTCS 50
>SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 497 FPDWLPKVSICLTTSMPSTTFPKTTCLPS 411
FP WL K S CL +P T+ P T + S
Sbjct: 302 FP-WLKKNSFCLYLPIPLTSIPSTPSIRS 329
>SPBC887.10 |mcs4||two-component response regulator
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 522
Score = 27.1 bits (57), Expect = 3.1
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 212 VIPNFMLQGGDFTNLTALGESPSTAISLKTRISPLSTLDLASSP 343
V+ + G DF N L SP T+++L+ R S LS+ S+P
Sbjct: 76 VMETYYPHGQDF-NDALLVASPDTSVALRYRSSQLSSSTFESTP 118
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 26.6 bits (56), Expect = 4.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 369 WFPVLHHHC 395
WFP +HHHC
Sbjct: 97 WFPEVHHHC 105
>SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr
1|||Manual
Length = 654
Score = 26.2 bits (55), Expect = 5.4
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -2
Query: 464 LTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCL 315
LT +P TTF T +P + +V ++++ PL+ + P PV L
Sbjct: 37 LTEQLP-TTFRITASIPHATQVRDYFIEHYYPLIENARTEDAKIPLPVSL 85
>SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 534
Score = 26.2 bits (55), Expect = 5.4
Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 10/89 (11%)
Frame = -1
Query: 453 HAFNNIPKDNMSAIQPGGLDSGDEELGTISISTGISHGEDARSSVLKG------EILVFK 292
H N P + P +S EL + IS+G+DA S VLK E++V +
Sbjct: 228 HELNESPSTPTAPDFPH-YNSSPSELSPTQRRSSISNGKDAPSPVLKDLTSYTQEVIVCR 286
Query: 291 LIAVDGLSPS----AVRLVKSPPCSMKLG 217
LSPS + K C KLG
Sbjct: 287 KFLHHSLSPSIHSTLSSISKMESCLSKLG 315
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 25.8 bits (54), Expect = 7.1
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = -2
Query: 482 PKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKF 303
P S + +S +++ T+ P+S EV T P+ S+ A + E + G V
Sbjct: 162 PASSTEVASSYSASSTEVTSSYPASSEVATSTSSYVAPVSSSVASSSEISAGSATSYVPT 221
Query: 302 SSSNL 288
SSS++
Sbjct: 222 SSSSI 226
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting protein
3 homolog Bud6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1385
Score = 25.8 bits (54), Expect = 7.1
Identities = 15/64 (23%), Positives = 30/64 (46%)
Frame = -3
Query: 250 GEVPSLQHEIGDDTMENGALVTEAFLASAQGTEVFTRLGSDVTSQLNNNFSQWGIVNSDV 71
GEV ++QH +T+++ T S+ TE+ RL + + ++ N +
Sbjct: 878 GEVSAIQHSSAQNTLDDHVNTTTHESPSSAFTEILERLKA-IEQNISTNHTNDSAALKSS 936
Query: 70 EEYS 59
E++S
Sbjct: 937 EDHS 940
>SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase
Sen1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1687
Score = 25.4 bits (53), Expect = 9.4
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2
Query: 515 NDFLEVFPDWL 483
NDF+ VFP+WL
Sbjct: 327 NDFVSVFPEWL 337
>SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1616
Score = 25.4 bits (53), Expect = 9.4
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = +2
Query: 101 KIVIELRSDVTPKTC-ENFRA---LCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNLT 259
++++ L SD+ PK C NF+A L FG + + F +I + G F ++
Sbjct: 1135 QLMLRLHSDIYPKICISNFKALRELSFSISEFGKENATFTLLIKLVFINWGRFCEVS 1191
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,387,941
Number of Sequences: 5004
Number of extensions: 72894
Number of successful extensions: 244
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 236
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 387388442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -