Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40539
(731 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0546 - 9381989-9383733,9385838-9386054 100 1e-21
05_05_0109 - 22454539-22456268,22457069-22457279 95 4e-20
11_08_0075 + 28173220-28173433,28175348-28177083 95 5e-20
01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229 95 5e-20
03_06_0484 + 34233042-34233258,34235317-34237049 94 1e-19
03_02_0540 + 9340379-9340592,9341250-9342988 94 1e-19
02_01_0112 - 839048-839552,839638-839720,839828-839982,840078-84... 87 1e-17
03_02_0542 - 9348126-9349585,9352433-9352655 85 4e-17
03_05_0877 + 28443481-28443538,28443641-28443911,28444028-284442... 81 9e-16
11_01_0564 - 4447078-4448519,4449465-4449711 79 3e-15
11_01_0563 + 4423609-4423846,4424671-4426132,4428949-4429364,443... 77 2e-14
05_03_0397 + 13488642-13488941,13489711-13489963,13490594-134906... 75 8e-14
08_01_0654 - 5639419-5641449 73 2e-13
05_04_0392 - 20889699-20891726 71 1e-12
02_05_0916 - 32706039-32706332,32707483-32708103,32708450-327090... 69 3e-12
11_01_0565 - 4457019-4457052,4457175-4458675,4460791-4460836 69 5e-12
03_01_0093 - 745434-746057,746492-747112,747222-747791,747870-74... 69 5e-12
05_04_0052 - 17515344-17517353 67 1e-11
01_06_0316 - 28419072-28419373,28419405-28420502,28420600-28420819 50 2e-06
01_01_0906 - 7124686-7124730,7124854-7124925,7125257-7125383,712... 49 3e-06
05_03_0041 - 7662094-7662138,7662269-7662340,7663144-7663179,766... 45 5e-05
01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165 41 0.001
06_03_0069 + 16179765-16179936,16179982-16180256 40 0.002
03_02_0180 - 6211823-6213559 33 0.31
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485... 30 1.6
08_02_0747 - 20728073-20728081,20728167-20728353,20728810-207289... 29 3.8
10_08_0114 - 14911119-14911301,14911458-14911550,14911634-149116... 28 6.6
>03_02_0546 - 9381989-9383733,9385838-9386054
Length = 653
Score = 100 bits (240), Expect = 1e-21
Identities = 49/61 (80%), Positives = 52/61 (85%)
Frame = +1
Query: 547 PTGAAWVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEK 726
P VPQI VTFDIDANGILNVSA +K+T K+NKITITNDKGRLSKEEIERMV EAEK
Sbjct: 472 PPAPRGVPQINVTFDIDANGILNVSAEDKTTGKKNKITITNDKGRLSKEEIERMVQEAEK 531
Query: 727 Y 729
Y
Sbjct: 532 Y 532
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/43 (58%), Positives = 26/43 (60%)
Frame = +3
Query: 381 VMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTK 509
VMT LI RN YSDNQPGVLIQV+EGER TK
Sbjct: 416 VMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTK 458
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +2
Query: 506 QDNNLLGKFELTGIPPAPRG 565
+DNNLLGKFELTGIPPAPRG
Sbjct: 458 KDNNLLGKFELTGIPPAPRG 477
>05_05_0109 - 22454539-22456268,22457069-22457279
Length = 646
Score = 95.5 bits (227), Expect = 4e-20
Identities = 46/61 (75%), Positives = 51/61 (83%)
Frame = +1
Query: 547 PTGAAWVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEK 726
P VPQI V FDIDANGILNVSA +K+T ++NKITITNDKGRLSKEEIE+MV EAEK
Sbjct: 470 PPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEK 529
Query: 727 Y 729
Y
Sbjct: 530 Y 530
Score = 51.6 bits (118), Expect = 6e-07
Identities = 26/43 (60%), Positives = 27/43 (62%)
Frame = +3
Query: 381 VMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTK 509
VMT LI RN YSDNQPGVLIQV+EGERA TK
Sbjct: 414 VMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTK 456
Score = 44.4 bits (100), Expect = 9e-05
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +2
Query: 506 QDNNLLGKFELTGIPPAPRG 565
+DNNLLGKFEL+GIPPAPRG
Sbjct: 456 KDNNLLGKFELSGIPPAPRG 475
>11_08_0075 + 28173220-28173433,28175348-28177083
Length = 649
Score = 95.1 bits (226), Expect = 5e-20
Identities = 46/61 (75%), Positives = 51/61 (83%)
Frame = +1
Query: 547 PTGAAWVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEK 726
P VPQI V FDIDANGILNVSA +K+T ++NKITITNDKGRLSKEEIE+MV EAEK
Sbjct: 471 PPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEK 530
Query: 727 Y 729
Y
Sbjct: 531 Y 531
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/43 (55%), Positives = 26/43 (60%)
Frame = +3
Query: 381 VMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTK 509
VMT LI RN YSDNQPGVLIQV+EGER T+
Sbjct: 415 VMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTR 457
Score = 44.4 bits (100), Expect = 9e-05
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +2
Query: 506 QDNNLLGKFELTGIPPAPRG 565
+DNNLLGKFEL+GIPPAPRG
Sbjct: 457 RDNNLLGKFELSGIPPAPRG 476
>01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229
Length = 841
Score = 95.1 bits (226), Expect = 5e-20
Identities = 46/61 (75%), Positives = 51/61 (83%)
Frame = +1
Query: 547 PTGAAWVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEK 726
P VPQI V FDIDANGILNVSA +K+T ++NKITITNDKGRLSKEEIE+MV EAEK
Sbjct: 663 PPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEK 722
Query: 727 Y 729
Y
Sbjct: 723 Y 723
Score = 51.6 bits (118), Expect = 6e-07
Identities = 26/43 (60%), Positives = 27/43 (62%)
Frame = +3
Query: 381 VMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTK 509
VMT LI RN YSDNQPGVLIQV+EGERA TK
Sbjct: 607 VMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTK 649
Score = 44.4 bits (100), Expect = 9e-05
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +2
Query: 506 QDNNLLGKFELTGIPPAPRG 565
+DNNLLGKFEL+GIPPAPRG
Sbjct: 649 KDNNLLGKFELSGIPPAPRG 668
>03_06_0484 + 34233042-34233258,34235317-34237049
Length = 649
Score = 93.9 bits (223), Expect = 1e-19
Identities = 45/61 (73%), Positives = 51/61 (83%)
Frame = +1
Query: 547 PTGAAWVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEK 726
P VPQI V FDIDANGILNVSA +K+T ++NKITITNDKGRLSKEEIE+MV +AEK
Sbjct: 472 PPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQDAEK 531
Query: 727 Y 729
Y
Sbjct: 532 Y 532
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/43 (55%), Positives = 26/43 (60%)
Frame = +3
Query: 381 VMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTK 509
VMT LI RN YSDNQPGVLIQV+EGER T+
Sbjct: 416 VMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTR 458
Score = 44.4 bits (100), Expect = 9e-05
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +2
Query: 506 QDNNLLGKFELTGIPPAPRG 565
+DNNLLGKFEL+GIPPAPRG
Sbjct: 458 RDNNLLGKFELSGIPPAPRG 477
>03_02_0540 + 9340379-9340592,9341250-9342988
Length = 650
Score = 93.9 bits (223), Expect = 1e-19
Identities = 45/61 (73%), Positives = 51/61 (83%)
Frame = +1
Query: 547 PTGAAWVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEK 726
P VPQI V FDIDANGILNVSA +K+T ++NKITITNDKGRLSKE+IE+MV EAEK
Sbjct: 471 PPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEK 530
Query: 727 Y 729
Y
Sbjct: 531 Y 531
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/43 (58%), Positives = 26/43 (60%)
Frame = +3
Query: 381 VMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTK 509
VMT LI RN YSDNQPGVLIQV+EGER TK
Sbjct: 415 VMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTK 457
Score = 44.4 bits (100), Expect = 9e-05
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +2
Query: 506 QDNNLLGKFELTGIPPAPRG 565
+DNNLLGKFEL+GIPPAPRG
Sbjct: 457 KDNNLLGKFELSGIPPAPRG 476
>02_01_0112 -
839048-839552,839638-839720,839828-839982,840078-840557,
840855-841097,841189-841403,841489-841756,842477-842525
Length = 665
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/61 (65%), Positives = 48/61 (78%)
Frame = +1
Query: 547 PTGAAWVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEK 726
P PQIEVTF++DANGILNV A +K T K KITITN+KGRLS+EEI+RMV EAE+
Sbjct: 494 PAAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNEKGRLSQEEIDRMVREAEE 553
Query: 727 Y 729
+
Sbjct: 554 F 554
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/43 (51%), Positives = 23/43 (53%)
Frame = +3
Query: 381 VMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTK 509
VMT LI RN Y D Q V IQVFEGER+MTK
Sbjct: 438 VMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSMTK 480
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +2
Query: 506 QDNNLLGKFELTGIPPAPRG 565
+D LLGKF+L+GIP APRG
Sbjct: 480 KDCRLLGKFDLSGIPAAPRG 499
>03_02_0542 - 9348126-9349585,9352433-9352655
Length = 560
Score = 85.4 bits (202), Expect = 4e-17
Identities = 41/61 (67%), Positives = 47/61 (77%)
Frame = +1
Query: 547 PTGAAWVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEK 726
P VPQI VTF ID NGI+NVSA +K+T + N ITI +DKGRLSKEEIERMV +AEK
Sbjct: 483 PPAPRGVPQINVTFSIDYNGIMNVSAEDKTTGRSNSITIKSDKGRLSKEEIERMVKKAEK 542
Query: 727 Y 729
Y
Sbjct: 543 Y 543
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +2
Query: 506 QDNNLLGKFELTGIPPAPRG 565
+DNN LGKF LTGIPPAPRG
Sbjct: 469 KDNNPLGKFVLTGIPPAPRG 488
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +3
Query: 384 MTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTK 509
M+ LI RN + DN+ VLI V EGE TK
Sbjct: 428 MSVLIPRNTTIPVSRQKMYTTHYDNETAVLINVNEGEGRRTK 469
>03_05_0877 +
28443481-28443538,28443641-28443911,28444028-28444242,
28444329-28445057,28445143-28445297,28445384-28445965
Length = 669
Score = 81.0 bits (191), Expect = 9e-16
Identities = 36/55 (65%), Positives = 47/55 (85%)
Frame = +1
Query: 565 VPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKY 729
VPQIEVTF++D NGIL+V+A +K+ + ITITNDKGRLS+EEI+RMV EAE++
Sbjct: 506 VPQIEVTFEVDENGILHVTASDKAAGRSKSITITNDKGRLSQEEIDRMVREAEEF 560
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/43 (46%), Positives = 24/43 (55%)
Frame = +3
Query: 381 VMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTK 509
VMT LI RN Y D+Q V I+VFEGER++TK
Sbjct: 444 VMTKLIPRNTRIPVKKSQVFTTYEDHQTTVSIKVFEGERSLTK 486
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2
Query: 506 QDNNLLGKFELTGIPPAPRG 565
+D LG+F+L+GI PAPRG
Sbjct: 486 KDCRELGRFDLSGIAPAPRG 505
>11_01_0564 - 4447078-4448519,4449465-4449711
Length = 562
Score = 79.4 bits (187), Expect = 3e-15
Identities = 38/61 (62%), Positives = 46/61 (75%)
Frame = +1
Query: 547 PTGAAWVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEK 726
P VP I+VTFDIDANG+LNVSA K T ++N ITITN GRL+KEEI+RM EAE+
Sbjct: 491 PPAPKRVPSIDVTFDIDANGVLNVSAEHKVTGQKNSITITNRSGRLNKEEIDRMALEAER 550
Query: 727 Y 729
+
Sbjct: 551 H 551
Score = 35.5 bits (78), Expect = 0.044
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +2
Query: 506 QDNNLLGKFELTGIPPAPR 562
+DNNLLG+F L GIPPAP+
Sbjct: 477 KDNNLLGEFTLYGIPPAPK 495
>11_01_0563 + 4423609-4423846,4424671-4426132,4428949-4429364,
4430555-4432052,4432199-4432217,4432469-4432675,
4432814-4433065
Length = 1363
Score = 76.6 bits (180), Expect = 2e-14
Identities = 35/61 (57%), Positives = 44/61 (72%)
Frame = +1
Query: 547 PTGAAWVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEK 726
P VP +VTFDID NG+LNV+A +K T ++N I I+N GRL+KEEIERM EAE+
Sbjct: 1287 PPAPMGVPHFDVTFDIDGNGVLNVTAEDKDTGRKNNIIISNRSGRLNKEEIERMALEAER 1346
Query: 727 Y 729
Y
Sbjct: 1347 Y 1347
Score = 72.5 bits (170), Expect = 3e-13
Identities = 32/55 (58%), Positives = 40/55 (72%)
Frame = +1
Query: 565 VPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKY 729
VPQI+VTF+ DANG+L+VSA + T +N I ITN GRL KE++ERM EA Y
Sbjct: 505 VPQIDVTFEFDANGVLHVSAKDMGTGSKNNIAITNHSGRLKKEDVERMAREARSY 559
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/57 (54%), Positives = 41/57 (71%)
Frame = +1
Query: 559 AWVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKY 729
A V +I+ T +IDANG+L+VSA + T ++N ITITN GRL KE++ERM EA Y
Sbjct: 1137 AGVARIDETLEIDANGVLHVSAEDMGTGRKNSITITNHSGRLKKEDVERMSREARSY 1193
Score = 34.7 bits (76), Expect = 0.077
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 512 NNLLGKFELTGIPPAPRG 565
NNLLGKF L+GI PAPRG
Sbjct: 487 NNLLGKFVLSGILPAPRG 504
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 506 QDNNLLGKFELTGIPPAPRGCLKL 577
++N LLG+F L+GI PAP G ++
Sbjct: 1119 KNNYLLGEFVLSGITPAPAGVARI 1142
>05_03_0397 +
13488642-13488941,13489711-13489963,13490594-13490673,
13491251-13491393,13491512-13491610,13491785-13491974,
13492504-13492902,13492993-13493400
Length = 623
Score = 74.5 bits (175), Expect = 8e-14
Identities = 38/66 (57%), Positives = 46/66 (69%)
Frame = +1
Query: 532 RADRDPTGAAWVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMV 711
R D P VPQIEV FDIDANGIL+VSA++K T K+ ITIT L K+E+E+MV
Sbjct: 435 RLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITG-ASTLPKDEVEKMV 493
Query: 712 NEAEKY 729
EAEK+
Sbjct: 494 EEAEKF 499
Score = 34.7 bits (76), Expect = 0.077
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +2
Query: 506 QDNNLLGKFELTGIPPAPRG 565
+DN LG F L GIPPAPRG
Sbjct: 426 RDNKSLGSFRLDGIPPAPRG 445
>08_01_0654 - 5639419-5641449
Length = 676
Score = 73.3 bits (172), Expect = 2e-13
Identities = 35/61 (57%), Positives = 48/61 (78%)
Frame = +1
Query: 547 PTGAAWVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEK 726
P GA PQIEVTF++DANGIL+V A +K+T + KITI+ D ++S+EEI+RMV EAE+
Sbjct: 509 PRGA---PQIEVTFEVDANGILSVLAADKATGRSEKITISGDDRKISQEEIDRMVREAEE 565
Query: 727 Y 729
+
Sbjct: 566 F 566
Score = 37.9 bits (84), Expect = 0.008
Identities = 20/43 (46%), Positives = 22/43 (51%)
Frame = +3
Query: 381 VMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTK 509
VM LI RN Y D Q V IQVFEGER+MT+
Sbjct: 450 VMAKLIPRNTVVPTKKTQVFTTYKDKQTTVTIQVFEGERSMTR 492
Score = 35.9 bits (79), Expect = 0.033
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +2
Query: 506 QDNNLLGKFELTGIPPAPRG 565
+DN LLG+F+L GI PAPRG
Sbjct: 492 RDNRLLGRFDLAGIAPAPRG 511
>05_04_0392 - 20889699-20891726
Length = 675
Score = 70.9 bits (166), Expect = 1e-12
Identities = 34/61 (55%), Positives = 47/61 (77%)
Frame = +1
Query: 547 PTGAAWVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEK 726
P GA PQI VTF++DANGIL+V A +K+T + KITI+ D ++S+EEI+RMV EAE+
Sbjct: 509 PRGA---PQIAVTFEVDANGILSVLAADKATGRSEKITISGDDRKISQEEIDRMVREAEE 565
Query: 727 Y 729
+
Sbjct: 566 F 566
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/43 (48%), Positives = 23/43 (53%)
Frame = +3
Query: 381 VMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTK 509
VMT LI RN Y D Q V IQVFEGER+MT+
Sbjct: 450 VMTKLIPRNTVVPTKKTQVFTTYKDRQTTVTIQVFEGERSMTR 492
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 506 QDNNLLGKFELTGIPPAPRG 565
+DN LLGKF+LTGI PAPRG
Sbjct: 492 RDNRLLGKFDLTGIAPAPRG 511
>02_05_0916 -
32706039-32706332,32707483-32708103,32708450-32709070,
32709183-32709752,32709840-32709918,32710002-32710075,
32711336-32711398
Length = 773
Score = 69.3 bits (162), Expect = 3e-12
Identities = 36/59 (61%), Positives = 43/59 (72%)
Frame = +1
Query: 547 PTGAAWVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAE 723
P +PQIEVTFDIDANGI+ VSA +KST KE +ITI G LS+ EI++MV EAE
Sbjct: 508 PPAPRGMPQIEVTFDIDANGIVTVSAKDKSTGKEQQITI-RSSGGLSEAEIQKMVQEAE 565
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 509 DNNLLGKFELTGIPPAPRG 565
DN LLG+F+L GIPPAPRG
Sbjct: 495 DNKLLGEFDLVGIPPAPRG 513
>11_01_0565 - 4457019-4457052,4457175-4458675,4460791-4460836
Length = 526
Score = 68.5 bits (160), Expect = 5e-12
Identities = 31/55 (56%), Positives = 38/55 (69%)
Frame = +1
Query: 565 VPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKY 729
VPQI+VTFD D NG+L+V A + T +N TITN GRL KE++ERM EA Y
Sbjct: 450 VPQIDVTFDFDTNGVLHVFAEDMGTGSKNNNTITNHSGRLKKEDVERMSREARSY 504
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +2
Query: 464 RSTHPSI*G*ACYDQDNNLLGKFELTGIPPAPRG 565
R + P G + DNNLLGKF L+G+ PAPRG
Sbjct: 416 RVSFPVFEGESASTLDNNLLGKFVLSGVLPAPRG 449
>03_01_0093 -
745434-746057,746492-747112,747222-747791,747870-747948,
748258-748331,748385-748387
Length = 656
Score = 68.5 bits (160), Expect = 5e-12
Identities = 35/59 (59%), Positives = 44/59 (74%)
Frame = +1
Query: 547 PTGAAWVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAE 723
P +PQIEVTFDIDANGI+ VSA +K+T KE +ITI G LS+ EI++MV+EAE
Sbjct: 488 PPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITI-RSSGGLSEAEIQKMVHEAE 545
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 509 DNNLLGKFELTGIPPAPRG 565
DN LLG+F+L GIPPAPRG
Sbjct: 475 DNKLLGEFDLVGIPPAPRG 493
>05_04_0052 - 17515344-17517353
Length = 669
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/61 (50%), Positives = 47/61 (77%)
Frame = +1
Query: 547 PTGAAWVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEK 726
P GA PQIEV F++DA+GIL+VSA +++T + +ITI+ D + S+EEI+RM+ EAE+
Sbjct: 505 PRGA---PQIEVAFEVDADGILSVSAADRATGRSERITISGDDRKTSREEIDRMLGEAEE 561
Query: 727 Y 729
+
Sbjct: 562 F 562
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/43 (44%), Positives = 23/43 (53%)
Frame = +3
Query: 381 VMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTK 509
VM TLI RN Y D Q V ++VFEGER+MT+
Sbjct: 446 VMATLIPRNTPVPTKRAQLFSTYKDKQTTVTVKVFEGERSMTR 488
Score = 35.9 bits (79), Expect = 0.033
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +2
Query: 506 QDNNLLGKFELTGIPPAPRG 565
+DN LLG+F+L GI PAPRG
Sbjct: 488 RDNRLLGRFDLAGIAPAPRG 507
>01_06_0316 - 28419072-28419373,28419405-28420502,28420600-28420819
Length = 539
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/52 (46%), Positives = 37/52 (71%)
Frame = +1
Query: 574 IEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKY 729
+ V F IDA+G+L VSA +K +N++ + ++ +LSKEEIERM EA++Y
Sbjct: 469 VSVCFSIDADGVLTVSARDKVNGHKNQMRVM-EQSQLSKEEIERMTMEAKEY 519
>01_01_0906 -
7124686-7124730,7124854-7124925,7125257-7125383,
7125424-7125572,7126126-7126465,7126759-7127090,
7127327-7127860
Length = 532
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = -3
Query: 171 MPDMVKKFLVYFRNMINEGVTYEILNLYENTFPTLTEKYFENTPWPDEDEVSPIVD 4
+PD VK F+ + + + YEI +YE F L+++ F + PWP + VSP D
Sbjct: 22 VPDSVKTFVAHMYRHVRDKNVYEIHQMYEGGFQRLSDRLFRDAPWPAAEAVSPYCD 77
>05_03_0041 -
7662094-7662138,7662269-7662340,7663144-7663179,
7663356-7663449,7663533-7663681,7664525-7664864,
7666417-7666748,7667348-7667821
Length = 513
Score = 45.2 bits (102), Expect = 5e-05
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = -3
Query: 171 MPDMVKKFLVYFRNMINEGVTYEILNLYENTFPTLTEKYFENTPWPDEDEVSPIVD 4
+PD VK F+ + I + YE +YE F L++++F +TPWP + V+ D
Sbjct: 9 VPDSVKTFVSHLYRHIRDRNVYETHQMYEGGFTRLSDRHFRDTPWPPAEAVAAHCD 64
>01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165
Length = 648
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 5/60 (8%)
Frame = +1
Query: 553 GAAWVPQIEVTFDIDANGILNVSAIEKS-TNKENKITITN----DKGRLSKEEIERMVNE 717
G W P I+VT +D G ++V A +K + K +++I + + GRLSKEEI+RM+ E
Sbjct: 502 GWRWRP-IQVTVKVDELGDIHVEATDKGGSGKSERLSIVSGEGHEHGRLSKEEIDRMIRE 560
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2
Query: 506 QDNNLLGKFELTGIPPA 556
+DN L G+ LTGIPPA
Sbjct: 480 KDNTLFGRLVLTGIPPA 496
>06_03_0069 + 16179765-16179936,16179982-16180256
Length = 148
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Frame = +3
Query: 549 HRRRVG----ASN*GHLRHRCQRYPQRFRYREVHQQGEQDHHYQRQ 674
HR RVG A++ G LRH +R+PQR + H+Q +DH+ QRQ
Sbjct: 78 HRHRVGVERAAADRGDLRHGRERHPQRVGRGQGHRQVGEDHYLQRQ 123
>03_02_0180 - 6211823-6213559
Length = 578
Score = 32.7 bits (71), Expect = 0.31
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = +2
Query: 506 QDNNLLGKFELTGIPPAPRGCLKL 577
+DN+LLG F++TGIP A +G +++
Sbjct: 488 EDNHLLGYFKITGIPAAAKGTVEI 511
>05_03_0235 -
10747649-10748118,10748226-10748314,10748477-10748574,
10748934-10749046,10749107-10749200,10749557-10749589,
10749734-10749851,10750110-10750210,10751036-10751233,
10751337-10751471,10751752-10751830,10753650-10753738,
10753835-10753987,10754100-10754285
Length = 651
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +3
Query: 549 HRRRVGASN*GHLRHRCQRYPQRFRYREVHQQGEQDHHYQRQRSSLQ-GRD--RAYG 710
HR R G S+ H H + QR R+ + HH+ RQ+ S + GR+ R YG
Sbjct: 542 HRHRHGHSHGDHHHHYHGGHHQRRRHHHPPAWDVEGHHHDRQQHSHEAGRNHHRGYG 598
>08_02_0747 -
20728073-20728081,20728167-20728353,20728810-20728913,
20729008-20729139,20729583-20729810,20730263-20730358,
20730440-20730511,20730588-20730760,20730947-20731000,
20731086-20731134,20731228-20731326,20731420-20731511,
20731607-20731832,20731927-20732100,20732186-20732809,
20732890-20733033,20733108-20733218,20733516-20733650,
20733963-20733989
Length = 911
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 64 SECGEGILIEVQDLICYTFINHVAKVNKEFLDHVRHFII 180
S G+ + +VQD IC+ NH K ++ F D + +I
Sbjct: 419 SSVGDLLPSDVQDKICHLLCNHFGKEDEIFEDKAKKLLI 457
>10_08_0114 -
14911119-14911301,14911458-14911550,14911634-14911678,
14911831-14911953,14912090-14912177,14912976-14913118
Length = 224
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = -3
Query: 207 YEPEYDRSSYYKMPDMVKKFLVYFRN-MINEGVTY--EILNLYENTFPTLTE 61
YEPE Y+M L++ ++ G Y EI +EN FP LTE
Sbjct: 165 YEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKYRKEIYAAFENMFPVLTE 216
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,308,400
Number of Sequences: 37544
Number of extensions: 353825
Number of successful extensions: 1068
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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