Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40538
         (795 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              24   1.9  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    24   1.9  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              23   3.3  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   3.3  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    23   4.3  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    23   4.3  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         22   7.5  
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    22   7.5  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    22   7.5  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    22   7.5  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   10.0 

>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2

Query: 440 INNLDTDCSAICRADL 487
           +N L T+CSAI  ADL
Sbjct: 97  VNKLITECSAISDADL 112


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 548 RISVNNTPRRNIYIYKDY 601
           ++S+NNT   N   YKDY
Sbjct: 131 QMSINNTNNNNTNKYKDY 148


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 440 INNLDTDCSAICRADL 487
           +N L T+CSAI  AD+
Sbjct: 97  VNKLITECSAISDADI 112


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 145 CTLHCSSY*HSQSIIFRD 92
           C +    Y HS++II+RD
Sbjct: 474 CVVEAFDYLHSRNIIYRD 491


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 611 SKWYNLYIYIYFFWACYSLKSSQR 540
           S W N+Y  I   WA + L  S R
Sbjct: 108 SCWTNIYYIIILAWALFYLLVSLR 131


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 611 SKWYNLYIYIYFFWACYSLKSSQR 540
           S W N+Y  I   WA + L  S R
Sbjct: 161 SCWTNIYYIIILAWALFYLLVSLR 184


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +3

Query: 477 GLICESTTSRVHPKNHSNRSSPL 545
           G++C+ TT  +      N+S P+
Sbjct: 11  GIVCQGTTGNILRGESLNKSLPI 33


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -2

Query: 611 SKWYNLYIYIYFFWACYSLKSSQRA 537
           S W N+Y  +   WA +    S R+
Sbjct: 70  SCWMNVYYIVILAWAIFYFFMSMRS 94


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +3

Query: 477 GLICESTTSRVHPKNHSNRSSPL 545
           G++C+ TT  +      N+S P+
Sbjct: 11  GIVCQGTTGNILRGESLNKSLPI 33


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +3

Query: 477 GLICESTTSRVHPKNHSNRSSPL 545
           G++C+ TT  +      N+S P+
Sbjct: 11  GIVCQGTTGNILRGESLNKSLPI 33


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +3

Query: 192 EFFIFLFIFYCPCRQTSIRPTDGE 263
           E+   +F+++ PC     RP+D E
Sbjct: 330 EWVKVVFLYWLPCILRMSRPSDKE 353


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,114
Number of Sequences: 438
Number of extensions: 4398
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)