Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40536
         (476 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q12PP4 Cluster: Putative uncharacterized protein; n=2; ...    33   4.3  
UniRef50_UPI0000E4657F Cluster: PREDICTED: hypothetical protein;...    32   5.7  
UniRef50_Q9BHA5 Cluster: Glycerol-3-phosphate acyltransferase; n...    32   7.5  
UniRef50_A5K3I2 Cluster: Putative uncharacterized protein; n=1; ...    31   10.0 
UniRef50_A0CL65 Cluster: Chromosome undetermined scaffold_20, wh...    31   10.0 

>UniRef50_Q12PP4 Cluster: Putative uncharacterized protein; n=2;
           Shewanella|Rep: Putative uncharacterized protein -
           Shewanella denitrificans (strain OS217 / ATCC BAA-1090 /
           DSM 15013)
          Length = 237

 Score = 32.7 bits (71), Expect = 4.3
 Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
 Frame = -2

Query: 217 HN-ALRSSAMLLCVTKLLPNTFTDTNDVSLKLT*G*SLRRVHLIDFDPLEM 68
           HN ALR+   LL  T ++ N+F +TND+ L+L  G  +   H  +F+ ++M
Sbjct: 85  HNDALRADQPLLVTTPVMLNSFDNTNDLGLQLQQG-MIAAFHAHEFNLVDM 134


>UniRef50_UPI0000E4657F Cluster: PREDICTED: hypothetical protein;
           n=3; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 1354

 Score = 32.3 bits (70), Expect = 5.7
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = +3

Query: 147 VSVKVLGSNFVTHNSIAELRKALCVSNNL 233
           +S  VL +N +THN +A L KAL  S NL
Sbjct: 196 LSTLVLWNNHITHNGVAHLGKALIKSTNL 224


>UniRef50_Q9BHA5 Cluster: Glycerol-3-phosphate acyltransferase;
           n=11; Plasmodium|Rep: Glycerol-3-phosphate
           acyltransferase - Plasmodium falciparum
          Length = 583

 Score = 31.9 bits (69), Expect = 7.5
 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 5/40 (12%)
 Frame = -3

Query: 273 VTYSIWLLIIYLTTSYLRRIM-----LCVARLCYYVSQNY 169
           + Y + L  IYL  S+L+RI+     +C+  +CYY++ NY
Sbjct: 444 IVYGL-LFSIYLYHSWLKRILFVFLSMCILPICYYINLNY 482


>UniRef50_A5K3I2 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 3120

 Score = 31.5 bits (68), Expect = 10.0
 Identities = 9/34 (26%), Positives = 20/34 (58%)
 Frame = -3

Query: 249 IIYLTTSYLRRIMLCVARLCYYVSQNYFLTLLQI 148
           +IY+ TS+    +  + ++C+YV  NY  + + +
Sbjct: 85  VIYINTSFCNSFVFIITKICFYVFDNYDFSFVSL 118


>UniRef50_A0CL65 Cluster: Chromosome undetermined scaffold_20, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_20,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 295

 Score = 31.5 bits (68), Expect = 10.0
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = +3

Query: 69  ISNGSKSM-RCTRLKL*P*VNFKETSFVSVKVLGSNFVTHNSIAELRKALCVSNN 230
           ISN  K + RC   +     NF+ T  + +K L  N +  +++ EL+K L +++N
Sbjct: 41  ISNAVKQIPRCPTCRFQNFFNFRGTITIEIKNLKENLLIKSTVNELKKHLSIADN 95


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 407,703,986
Number of Sequences: 1657284
Number of extensions: 6871334
Number of successful extensions: 12575
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12573
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26870548160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)