Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40534
(653 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN full... 162 8e-39
UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93; Eukaryo... 162 8e-39
UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82; Eukaryo... 139 5e-32
UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21; Eukaryo... 128 9e-29
UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8; Euteleostomi... 126 5e-28
UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4; Eukaryot... 125 8e-28
UniRef50_UPI000049933B Cluster: conserved hypothetical protein; ... 109 8e-23
UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces ... 108 1e-22
UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19; Eukaryo... 108 1e-22
UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;... 94 2e-18
UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamb... 81 2e-14
UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitoz... 76 6e-13
UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillard... 75 2e-12
UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whol... 70 4e-11
UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7; Archaea... 66 9e-10
UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma j... 63 6e-09
UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella... 62 1e-08
UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5; Euryarc... 58 1e-07
UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5; Archaea... 56 7e-07
UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole gen... 52 2e-05
UniRef50_Q0W1L5 Cluster: 30S ribosomal protein S8e; n=3; Euryarc... 50 6e-05
UniRef50_A0RXG5 Cluster: Ribosomal protein S8E; n=2; Thermoprote... 49 1e-04
UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6; Archaea... 48 1e-04
UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1; Methano... 48 2e-04
UniRef50_Q980W3 Cluster: 30S ribosomal protein S8e; n=4; Archaea... 47 3e-04
UniRef50_Q9YDY0 Cluster: 30S ribosomal protein S8e; n=3; Desulfu... 42 0.013
UniRef50_P61300 Cluster: 30S ribosomal protein S8e; n=5; Methano... 41 0.023
UniRef50_Q8ZTB8 Cluster: 30S ribosomal protein S8e; n=6; Archaea... 40 0.052
UniRef50_Q2NEU6 Cluster: 30S ribosomal protein S8e; n=1; Methano... 38 0.21
UniRef50_Q2W531 Cluster: TPR repeat; n=3; Magnetospirillum|Rep: ... 37 0.49
UniRef50_A7F1W3 Cluster: Putative uncharacterized protein; n=1; ... 36 0.85
UniRef50_UPI0000F2B19F Cluster: PREDICTED: hypothetical protein;... 35 1.5
UniRef50_A1RX37 Cluster: Ribosomal protein S8e; n=1; Thermofilum... 35 1.5
UniRef50_UPI0000DB7956 Cluster: PREDICTED: similar to Deformed C... 35 2.0
UniRef50_UPI0000F32D0C Cluster: Zinc finger CCCH domain-containi... 34 2.6
UniRef50_Q8TN82 Cluster: Predicted protein; n=1; Methanosarcina ... 33 6.0
UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium ja... 33 7.9
UniRef50_A7D873 Cluster: Exodeoxyribonuclease III Xth; n=2; Meth... 33 7.9
UniRef50_A5UZX2 Cluster: Putative uncharacterized protein precur... 33 7.9
UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1; ... 33 7.9
>UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence; n=9;
Deuterostomia|Rep: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence - Mus
musculus (Mouse)
Length = 152
Score = 162 bits (393), Expect = 8e-39
Identities = 71/85 (83%), Positives = 77/85 (90%)
Frame = +1
Query: 1 RDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGN 180
RD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GN
Sbjct: 5 RDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGN 64
Query: 181 FSWGSECSTRKTRIIDVVYNASNND 255
FSWGSEC TRKTRIIDVVYNASNN+
Sbjct: 65 FSWGSECCTRKTRIIDVVYNASNNE 89
Score = 104 bits (249), Expect = 2e-21
Identities = 46/60 (76%), Positives = 53/60 (88%)
Frame = +3
Query: 255 LVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKY 434
LVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY
Sbjct: 90 LVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKY 149
>UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93;
Eukaryota|Rep: 40S ribosomal protein S8 - Homo sapiens
(Human)
Length = 208
Score = 162 bits (393), Expect = 8e-39
Identities = 71/85 (83%), Positives = 77/85 (90%)
Frame = +1
Query: 1 RDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGN 180
RD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GN
Sbjct: 5 RDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGN 64
Query: 181 FSWGSECSTRKTRIIDVVYNASNND 255
FSWGSEC TRKTRIIDVVYNASNN+
Sbjct: 65 FSWGSECCTRKTRIIDVVYNASNNE 89
Score = 126 bits (304), Expect = 5e-28
Identities = 58/84 (69%), Positives = 69/84 (82%)
Frame = +3
Query: 255 LVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKY 434
LVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY
Sbjct: 90 LVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKY 149
Query: 435 LARQRLAKVEGALEEQFHTGRLLA 506
R++ AK+ LEEQF G+LLA
Sbjct: 150 DERKKNAKISSLLEEQFQQGKLLA 173
Score = 69.7 bits (163), Expect = 6e-11
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = +2
Query: 491 GAFAGLVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 610
G +ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 169 GKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
>UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82;
Eukaryota|Rep: 40S ribosomal protein S8 - Drosophila
melanogaster (Fruit fly)
Length = 208
Score = 139 bits (337), Expect = 5e-32
Identities = 64/85 (75%), Positives = 72/85 (84%)
Frame = +1
Query: 1 RDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGN 180
RD HKRRATGGKR +RKKRK+ELGRPAANT+LG R+H VR+RGGNTK RALRL+TGN
Sbjct: 5 RDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRLETGN 64
Query: 181 FSWGSECSTRKTRIIDVVYNASNND 255
F+W SE RKTRI DVVYNASNN+
Sbjct: 65 FAWASEGVARKTRIADVVYNASNNE 89
Score = 118 bits (284), Expect = 1e-25
Identities = 55/86 (63%), Positives = 69/86 (80%), Gaps = 2/86 (2%)
Frame = +3
Query: 255 LVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEA--IINKKRSQKTAR 428
LVRTKTLVKN+IVV+DATPFRQWYE+HY LPLGRK+ K + E+ ++ KKRS+K +
Sbjct: 90 LVRTKTLVKNSIVVIDATPFRQWYEAHYVLPLGRKRNPKHAQKEDENDVLTKKRSEKVMK 149
Query: 429 KYLARQRLAKVEGALEEQFHTGRLLA 506
KYL RQ+ KVE ALE+QF +GR+LA
Sbjct: 150 KYLERQKYGKVEQALEDQFTSGRILA 175
Score = 66.9 bits (156), Expect = 4e-10
Identities = 28/38 (73%), Positives = 33/38 (86%)
Frame = +2
Query: 491 GAFAGLVASRPGQCGRADGYILEGKELEFYLRKIKSKR 604
G ++SRPGQCGR+DGYILEGKELEFYL+KIKSK+
Sbjct: 171 GRILACISSRPGQCGRSDGYILEGKELEFYLKKIKSKK 208
>UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21;
Eukaryota|Rep: 40S ribosomal protein S8 - Zea mays
(Maize)
Length = 221
Score = 128 bits (310), Expect = 9e-29
Identities = 61/86 (70%), Positives = 69/86 (80%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 RDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTG 177
RD HKRRATGGK+ RKKRKYELGR ANT+L + + VR RGGN K+RALRLDTG
Sbjct: 5 RDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTG 64
Query: 178 NFSWGSECSTRKTRIIDVVYNASNND 255
N+SWGSE TRKTRI+DVVYNASNN+
Sbjct: 65 NYSWGSEAVTRKTRILDVVYNASNNE 90
Score = 74.9 bits (176), Expect = 1e-12
Identities = 43/92 (46%), Positives = 56/92 (60%), Gaps = 8/92 (8%)
Frame = +3
Query: 255 LVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKK--------GAKLTEAEEAIINKKR 410
LVRT+TLVK+AIV VDA PF+QWY +HY + +GRKK A+ E E A K+
Sbjct: 91 LVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKTPAAKKDNAEGQEVEAAAEETKK 150
Query: 411 SQKTARKYLARQRLAKVEGALEEQFHTGRLLA 506
S RK R+ ++ +EEQF +GRLLA
Sbjct: 151 SNHVTRKLEKRKEGRTLDPHIEEQFGSGRLLA 182
Score = 64.9 bits (151), Expect = 2e-09
Identities = 26/40 (65%), Positives = 33/40 (82%)
Frame = +2
Query: 491 GAFAGLVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 610
G ++SRPGQCGRADGYILEGKELEFY++K++ K+ K
Sbjct: 178 GRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK 217
>UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8;
Euteleostomi|Rep: Ribosomal protein S8 - Homo sapiens
(Human)
Length = 188
Score = 126 bits (304), Expect = 5e-28
Identities = 58/84 (69%), Positives = 69/84 (82%)
Frame = +3
Query: 255 LVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKY 434
LVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY
Sbjct: 70 LVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKY 129
Query: 435 LARQRLAKVEGALEEQFHTGRLLA 506
R++ AK+ LEEQF G+LLA
Sbjct: 130 DERKKNAKISSLLEEQFQQGKLLA 153
Score = 101 bits (243), Expect = 1e-20
Identities = 54/85 (63%), Positives = 60/85 (70%)
Frame = +1
Query: 1 RDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGN 180
RD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGG
Sbjct: 5 RDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGG------------- 51
Query: 181 FSWGSECSTRKTRIIDVVYNASNND 255
C TRKTRIIDVVYNASNN+
Sbjct: 52 ------C-TRKTRIIDVVYNASNNE 69
Score = 69.7 bits (163), Expect = 6e-11
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = +2
Query: 491 GAFAGLVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 610
G +ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 149 GKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 188
>UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4;
Eukaryota|Rep: 40S ribosomal protein S8 - Theileria
parva
Length = 188
Score = 125 bits (302), Expect = 8e-28
Identities = 56/85 (65%), Positives = 70/85 (82%)
Frame = +1
Query: 1 RDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGN 180
RD HKRR TGG+ +KKRKYELGRP++NT+LG + + VR RGGN K+RALRLD+GN
Sbjct: 5 RDSRHKRRLTGGRYPVHKKKRKYELGRPSSNTKLGSKLVRKVRCRGGNLKFRALRLDSGN 64
Query: 181 FSWGSECSTRKTRIIDVVYNASNND 255
FSWGS+ TRKTR++DVVYNAS+N+
Sbjct: 65 FSWGSQNVTRKTRVMDVVYNASSNE 89
Score = 56.4 bits (130), Expect = 6e-07
Identities = 24/34 (70%), Positives = 29/34 (85%)
Frame = +3
Query: 255 LVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGR 356
LVRTKTLVKNAIV VD TPF+ W+++HY L LG+
Sbjct: 90 LVRTKTLVKNAIVTVDPTPFKLWFKTHYGLELGK 123
Score = 54.8 bits (126), Expect = 2e-06
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = +2
Query: 491 GAFAGLVASRPGQCGRADGYILEGKELEFYLRKIKSKR 604
G ++SRPGQCGR DGY+LEG+EL FY R++ K+
Sbjct: 149 GRLLACISSRPGQCGRCDGYVLEGEELNFYRRRMDKKK 186
>UniRef50_UPI000049933B Cluster: conserved hypothetical protein;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 237
Score = 109 bits (261), Expect = 8e-23
Identities = 51/86 (59%), Positives = 65/86 (75%)
Frame = +1
Query: 1 RDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGN 180
RD HKRRATGGK+ ++KK+K +GR ANTRLG R+H VR R G K RALRL+ GN
Sbjct: 5 RDSRHKRRATGGKKNSMQKKKKNTMGRQPANTRLGAIRVHDVRCRYGIIKRRALRLENGN 64
Query: 181 FSWGSECSTRKTRIIDVVYNASNNDW 258
FSW S+ T+ T+I++VVYNAS+ND+
Sbjct: 65 FSWASQSITKGTKILNVVYNASDNDF 90
Score = 50.8 bits (116), Expect = 3e-05
Identities = 21/38 (55%), Positives = 27/38 (71%)
Frame = +2
Query: 491 GAFAGLVASRPGQCGRADGYILEGKELEFYLRKIKSKR 604
G ++SRPGQ G +GYILEGKEL+FY +KI K+
Sbjct: 199 GRVLACISSRPGQTGSVEGYILEGKELDFYSKKISDKK 236
Score = 38.7 bits (86), Expect = 0.12
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = +3
Query: 258 VRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKK----RSQKTA 425
VRT TLVK AI+ +D PFR W+ Y + K E+ KK + ++
Sbjct: 91 VRTNTLVKGAIIEIDPAPFRLWFLKFYGKDIASTDYYKSLESATFKTEKKVVVPKEEENK 150
Query: 426 RKYLARQRLAKVEGAL 473
K +A Q++A+ + AL
Sbjct: 151 EKTIA-QQIAETQVAL 165
>UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces
capsulatus NAm1|Rep: Ribosomal protein S8 - Ajellomyces
capsulatus NAm1
Length = 141
Score = 108 bits (259), Expect = 1e-22
Identities = 50/77 (64%), Positives = 59/77 (76%)
Frame = +1
Query: 1 RDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGN 180
RD HKR ATG KR+ RKKR +E GR ANTR+GP+RIH VR+RGGN K+R LRL++GN
Sbjct: 5 RDSRHKRSATGAKRSHYRKKRAFEKGRQPANTRIGPKRIHLVRTRGGNQKFRGLRLESGN 64
Query: 181 FSWGSECSTRKTRIIDV 231
FSWGSE RK R+I V
Sbjct: 65 FSWGSEGIARKVRVIVV 81
Score = 50.0 bits (114), Expect = 5e-05
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +2
Query: 491 GAFAGLVASRPGQCGRADGYILEGKELEFYLRKIK 595
G +V+SRPGQ GR DGYILEG+EL FY R I+
Sbjct: 106 GRLYAVVSSRPGQSGRVDGYILEGEELAFYQRAIR 140
>UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19;
Eukaryota|Rep: 40S ribosomal protein S8 - Leishmania
major
Length = 220
Score = 108 bits (259), Expect = 1e-22
Identities = 50/85 (58%), Positives = 62/85 (72%)
Frame = +1
Query: 1 RDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGN 180
R HKR+ TGGK RK+ K ELGR ANTRLG +R+ VR+RGGN K RALRLDTGN
Sbjct: 5 RSRLHKRKITGGKTKIHRKRMKAELGRLPANTRLGARRVSPVRARGGNFKIRALRLDTGN 64
Query: 181 FSWGSECSTRKTRIIDVVYNASNND 255
F+W SE + R++DVVYNA++N+
Sbjct: 65 FAWASEAIAHRVRLLDVVYNATSNE 89
Score = 66.5 bits (155), Expect = 5e-10
Identities = 43/97 (44%), Positives = 54/97 (55%), Gaps = 13/97 (13%)
Frame = +3
Query: 255 LVRTKTLVKNAIVVVDATPFRQWYESHYTLPL-GRKKGAKLTEAEE--------AIINK- 404
LVRTKTLVKN IV VDA PF++WY HY + L KK K A E A +K
Sbjct: 90 LVRTKTLVKNCIVAVDAAPFKRWYAKHYGIDLDADKKSTKAAVAAEKKGRKSAHAAADKY 149
Query: 405 ---KRSQKTARKYLARQRLAKVEGALEEQFHTGRLLA 506
K S K R++ R+R +VE A+ +Q GR+LA
Sbjct: 150 DVNKASPKLQREWTRRRRNHRVEKAIADQLREGRVLA 186
Score = 50.0 bits (114), Expect = 5e-05
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +2
Query: 491 GAFAGLVASRPGQCGRADGYILEGKELEFYLRKIKSKR 604
G + SRPGQ GRADG +LEG EL+FYL++++ K+
Sbjct: 182 GRVLARITSRPGQSGRADGILLEGAELQFYLKRLEKKK 219
>UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;
Zea mays|Rep: Putative 40S ribosomal protein S8 - Zea
mays (Maize)
Length = 245
Score = 94.3 bits (224), Expect = 2e-18
Identities = 44/75 (58%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
Frame = +1
Query: 34 GKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWGSECSTR 210
G P+++++ YELGR ANT+L + + VR RGGNTK+RALR DT N+SWGSE TR
Sbjct: 113 GPFCPLQEEQGYELGRQPANTKLSSNKTVRRVRVRGGNTKWRALRFDTCNYSWGSEALTR 172
Query: 211 KTRIIDVVYNASNND 255
KTRI+DVVY A+NN+
Sbjct: 173 KTRILDVVYIATNNE 187
Score = 59.3 bits (137), Expect = 8e-08
Identities = 25/45 (55%), Positives = 35/45 (77%)
Frame = +3
Query: 255 LVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 389
LVRT+TLVK+AIV VDA PF+QWY +HY + +GRKK + + ++
Sbjct: 188 LVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKVSVAKKDD 232
>UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamblia
ATCC 50803|Rep: Ribosomal protein S8 - Giardia lamblia
ATCC 50803
Length = 174
Score = 81.0 bits (191), Expect = 2e-14
Identities = 43/93 (46%), Positives = 57/93 (61%), Gaps = 9/93 (9%)
Frame = +1
Query: 4 DHWHKRRATGGKRAPIRKKRKYELGRPAANTRL---------GPQRIHSVRSRGGNTKYR 156
D +KR TG + KKRKY LGR ANT+L Q+I ++R RGGN K R
Sbjct: 6 DKMYKRSKTGAVQGKWHKKRKYNLGRQPANTKLIVKVTSKKNEGQKISTIRCRGGNIKRR 65
Query: 157 ALRLDTGNFSWGSECSTRKTRIIDVVYNASNND 255
ALRL G+F+WGS + K RI+ VVYN+++N+
Sbjct: 66 ALRLSHGSFAWGSADISHKARILQVVYNSTSNE 98
Score = 46.4 bits (105), Expect = 6e-04
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = +2
Query: 509 VASRPGQCGRADGYILEGKELEFYLRKIKSK 601
++SRPGQ G ADGYILEG EL FY +K+ K
Sbjct: 144 ISSRPGQVGTADGYILEGPELLFYQKKLAPK 174
>UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitozoon
cuniculi|Rep: Ribosomal protein S8 - Encephalitozoon
cuniculi
Length = 173
Score = 76.2 bits (179), Expect = 6e-13
Identities = 35/81 (43%), Positives = 52/81 (64%)
Frame = +1
Query: 13 HKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWG 192
HKRR TG K RKKR G ++T++G +++ VR RGGN KY+ALRLD G+F +
Sbjct: 9 HKRRKTGAKAVISRKKRNNRAGSQPSSTKIGERKVTPVRVRGGNRKYKALRLDMGHFKFI 68
Query: 193 SECSTRKTRIIDVVYNASNND 255
+ R +++ VVY+ S+N+
Sbjct: 69 TTGKFRMAKLLQVVYHPSSNE 89
Score = 41.9 bits (94), Expect = 0.013
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +2
Query: 491 GAFAGLVASRPGQCGRADGYILEGKELEFYLRKIKSK 601
G ++ SRPGQ G A G++L+G EL+FY K K
Sbjct: 131 GHLYAIITSRPGQVGMAQGHVLQGDELKFYADKFNKK 167
>UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillardia
theta|Rep: 40S ribosomal protein S8 - Guillardia theta
(Cryptomonas phi)
Length = 178
Score = 74.5 bits (175), Expect = 2e-12
Identities = 37/85 (43%), Positives = 55/85 (64%)
Frame = +1
Query: 1 RDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGN 180
R+ HKR++TGG ++ RKKR + GR +NT++G + + +R RGG K RAL L GN
Sbjct: 5 REGLHKRKSTGGLKSCWRKKRNHAKGRQPSNTKIGRRCVVKLRVRGGGVKTRALFLSYGN 64
Query: 181 FSWGSECSTRKTRIIDVVYNASNND 255
FS+ S T K +I+ V +N S+N+
Sbjct: 65 FSFVSIQRTFKAKILSVAFNESSNE 89
Score = 53.6 bits (123), Expect = 4e-06
Identities = 22/37 (59%), Positives = 29/37 (78%)
Frame = +2
Query: 491 GAFAGLVASRPGQCGRADGYILEGKELEFYLRKIKSK 601
G + SRPGQ GRADGYILEG+EL+++L+KI+ K
Sbjct: 142 GKILARICSRPGQSGRADGYILEGQELDYFLKKIQKK 178
>UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whole
genome shotgun sequence; n=2; Coelomata|Rep: Chromosome
undetermined SCAF13783, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 149
Score = 70.1 bits (164), Expect = 4e-11
Identities = 30/34 (88%), Positives = 33/34 (97%)
Frame = +2
Query: 509 VASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 610
+ASRPGQCGRADGYILEGKELEFYLRKIK+K+ K
Sbjct: 116 IASRPGQCGRADGYILEGKELEFYLRKIKAKKGK 149
>UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7;
Archaea|Rep: 30S ribosomal protein S8e - Picrophilus
torridus
Length = 125
Score = 65.7 bits (153), Expect = 9e-10
Identities = 35/84 (41%), Positives = 50/84 (59%)
Frame = +1
Query: 19 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSE 198
R+ +GGK P KR+YELGR TRLG + + +RS GGN+K+ LR D N +
Sbjct: 10 RKPSGGKLRPNHSKRRYELGREPTLTRLGDRELRKIRSYGGNSKFALLRCDYANVYNPKD 69
Query: 199 CSTRKTRIIDVVYNASNNDWCVQR 270
+TRK +I V N+++ + VQR
Sbjct: 70 KTTRKVKINTVKENSADPHY-VQR 92
>UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03085 protein - Schistosoma
japonicum (Blood fluke)
Length = 120
Score = 62.9 bits (146), Expect = 6e-09
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 9/85 (10%)
Frame = +3
Query: 279 KNAIVVVDATPFRQWYESHYTLPLGR-----KKGAKLT--EAEEAIINKKRSQKTARKYL 437
K+AIV + PFRQW+E+ Y LG KKG +T EE + KKRS+ +K+
Sbjct: 1 KSAIVQIGGAPFRQWFEAPYLKELGPPKVVCKKGPSVTPENPEEDFLLKKRSKSALKKFE 60
Query: 438 ARQRL--AKVEGALEEQFHTGRLLA 506
RQ L A VE +L+E+F TGRLLA
Sbjct: 61 TRQALPQANVEESLKEEFVTGRLLA 85
Score = 58.0 bits (134), Expect = 2e-07
Identities = 23/40 (57%), Positives = 32/40 (80%)
Frame = +2
Query: 491 GAFAGLVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 610
G ++S+PGQ GRADGY+ EGKELEF+ +K+K+K+AK
Sbjct: 81 GRLLACISSKPGQVGRADGYLFEGKELEFFSKKLKAKKAK 120
>UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella
natans|Rep: Ribosomal protein S8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 176
Score = 62.1 bits (144), Expect = 1e-08
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Frame = +1
Query: 16 KRRATGGKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWG 192
K++ TGGK+ I KK+ + G NT L I R RGGN K++A+ L G+F W
Sbjct: 3 KKKLTGGKKKKISKKKNHSKGNNPTNTVLRRANFIKMTRVRGGNFKFKAISLGKGSFQWK 62
Query: 193 SECSTRKTRIIDVVYNASNNDWCVQRPLSR 282
+ ++ ++I+ V+YN +N +R LS+
Sbjct: 63 TMQLSKNSKILSVLYNQANLKLVQKRNLSK 92
>UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S8e -
Thermoplasma acidophilum
Length = 127
Score = 58.4 bits (135), Expect = 1e-07
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +1
Query: 19 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSV-RSRGGNTKYRALRLDTGNFSWGS 195
++ATGG RKKR++ELGR T+LG + V R+ GGNTK +T N S
Sbjct: 10 KKATGGSLKQSRKKRRFELGREPTLTKLGTKTERKVIRTMGGNTKVILFTAETANVYDAS 69
Query: 196 ECSTRKTRIIDVVYNASNNDWCVQR 270
E +K +II V N +N+ + VQR
Sbjct: 70 EKKIKKAKIITVKANPANSHY-VQR 93
>UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5;
Archaea|Rep: 30S ribosomal protein S8e - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 125
Score = 56.0 bits (129), Expect = 7e-07
Identities = 30/88 (34%), Positives = 53/88 (60%)
Frame = +1
Query: 19 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSE 198
R+ +GG+ + K++ E+GR A T +G +R VR+ GGN K RALRL+ S +
Sbjct: 9 RKPSGGRYHTSQGKKRTEIGRAPAETHIGEERRRIVRTFGGNQKVRALRLEYATVSNPAT 68
Query: 199 CSTRKTRIIDVVYNASNNDWCVQRPLSR 282
T+KT+I V N+++ ++ ++ L++
Sbjct: 69 GETKKTKIEAVEANSADPNYVRRKLLTK 96
>UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_54, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 110
Score = 51.6 bits (118), Expect = 2e-05
Identities = 35/84 (41%), Positives = 48/84 (57%)
Frame = +3
Query: 255 LVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKY 434
LVRT+TLVKNAI+ Q Y HY L +G KK A T ++ +++ RK
Sbjct: 32 LVRTQTLVKNAII--------QRYLQHYGLDIGCKKKASTTPRKK----ERKGNHVVRKL 79
Query: 435 LARQRLAKVEGALEEQFHTGRLLA 506
RQ+ K++ +EEQF +GRLLA
Sbjct: 80 EKRQQDHKLDPHIEEQFGSGRLLA 103
>UniRef50_Q0W1L5 Cluster: 30S ribosomal protein S8e; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8e -
Uncultured methanogenic archaeon RC-I
Length = 125
Score = 49.6 bits (113), Expect = 6e-05
Identities = 26/80 (32%), Positives = 42/80 (52%)
Frame = +1
Query: 19 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSE 198
R+ATGG+ R KRK+ELGR +G Q++ + G +K R L+ D N +
Sbjct: 9 RKATGGRLRLNRSKRKFELGRDFTIPVIGAQKLKVLNVTGNGSKVRVLKSDVVNVTDPKT 68
Query: 199 CSTRKTRIIDVVYNASNNDW 258
T+K ++ V N +N ++
Sbjct: 69 GKTQKVKMTTVTENPANKNY 88
>UniRef50_A0RXG5 Cluster: Ribosomal protein S8E; n=2;
Thermoprotei|Rep: Ribosomal protein S8E - Cenarchaeum
symbiosum
Length = 129
Score = 48.8 bits (111), Expect = 1e-04
Identities = 26/79 (32%), Positives = 42/79 (53%)
Frame = +1
Query: 22 RATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSEC 201
+ TGG+R P+R +RKYE+ R G Q + + RG TK +D N +
Sbjct: 12 KLTGGRRHPLRTRRKYEIDRYPNEALSGAQETVTRKVRGKRTKTALKTIDFVNLA-VQGA 70
Query: 202 STRKTRIIDVVYNASNNDW 258
+K++I+ V+ N +NND+
Sbjct: 71 KVKKSKIVKVLENPTNNDY 89
>UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6;
Archaea|Rep: 30S ribosomal protein S8e - Pyrococcus
horikoshii
Length = 127
Score = 48.4 bits (110), Expect = 1e-04
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +1
Query: 19 RRATGGKRAPIRKKRKYELGRPAANTRLGPQ-RIHSVRSRGGNTKYRALRLDTGNFSWGS 195
++ +GG+ RKKRK ELGR +NTR+ Q + +R+ GGN K R N +
Sbjct: 10 KKPSGGRIVLARKKRKRELGREPSNTRVAEQDKRKIIRTYGGNRKVRLTAAAYANV-FDK 68
Query: 196 ECSTRKTRIIDVVYNASNNDW 258
RK RII V+ N +N +
Sbjct: 69 SGKGRKVRIIRVLENPANRQF 89
>UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S8e -
Methanopyrus kandleri
Length = 133
Score = 48.0 bits (109), Expect = 2e-04
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Frame = +1
Query: 10 WHKR---RATGGKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDT- 174
WH R + TGG+ P RKKRK+E+G P T +G +R + R GGN K + L+ T
Sbjct: 4 WHGRSLRKPTGGRIRPHRKKRKFEMGNPPTETLVGEERKLKERRGMGGNVK-KGLKFATH 62
Query: 175 GNFSWGSECSTRKTRIIDVVYNASN 249
N + + RI +VV N ++
Sbjct: 63 ANVADPETGEVKCVRIEEVVKNPAS 87
>UniRef50_Q980W3 Cluster: 30S ribosomal protein S8e; n=4;
Archaea|Rep: 30S ribosomal protein S8e - Sulfolobus
solfataricus
Length = 133
Score = 47.2 bits (107), Expect = 3e-04
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +1
Query: 19 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIH-SVRSRGGNTKYRALRLDTGNFSWGS 195
R+ TGG + R KRKYE+G P T L + I R+ GGN K R T N +
Sbjct: 10 RKITGGLKGKHRDKRKYEIGNPPTFTTLSAEDIRIKDRTLGGNFKVRLKYTTTANVLDPA 69
Query: 196 ECSTRKTRIIDVVYNASNND 255
+ +K +I++++ +N +
Sbjct: 70 TNTAKKVKILEILETPANKE 89
>UniRef50_Q9YDY0 Cluster: 30S ribosomal protein S8e; n=3;
Desulfurococcales|Rep: 30S ribosomal protein S8e -
Aeropyrum pernix
Length = 136
Score = 41.9 bits (94), Expect = 0.013
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Frame = +1
Query: 16 KRRATGGKRAPIRK-KRKYELGRPAANTRLG---PQRIHSVRSRGGNTKYRALRLDTGNF 183
K++ +GGKR K KRKY GRP T L + VR+RGG+ K +A ++
Sbjct: 9 KKKPSGGKRRYYYKVKRKYAAGRPPTYTTLSAAEEEERKPVRARGGSYKIKAKKVAFAVV 68
Query: 184 SWGSECSTRKTRIIDVVYNASNNDW 258
S RK RI+ +V ++ ++
Sbjct: 69 SNPKTGEARKARILRIVETPAHREY 93
>UniRef50_P61300 Cluster: 30S ribosomal protein S8e; n=5;
Methanococcus|Rep: 30S ribosomal protein S8e -
Methanococcus maripaludis
Length = 128
Score = 41.1 bits (92), Expect = 0.023
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +1
Query: 16 KRRATGGKRAPIRKKRKYELGRPAANTRLGPQ-RIHSVRSRGGNTKYRALRLDTGNFSWG 192
+R +TG K KK K E+GRPAA T++ + + VR RG N K + + + N
Sbjct: 9 RRLSTGAKVWRAAKKHKREMGRPAAETQVSDKIKRKIVRCRGANLKVKLEKTNYANVFDQ 68
Query: 193 SECSTRKTRIIDVVYNASNNDW 258
+ +K + +V+ N +N +
Sbjct: 69 ANKVCKKVVVTNVIDNKANKHY 90
>UniRef50_Q8ZTB8 Cluster: 30S ribosomal protein S8e; n=6;
Archaea|Rep: 30S ribosomal protein S8e - Pyrobaculum
aerophilum
Length = 131
Score = 39.9 bits (89), Expect = 0.052
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +1
Query: 19 RRATGGKRAPIRKKRKYEL-GRPAANTRLGPQRIHSV-RSRGGNTKYRALRLDTGNFSWG 192
++ +GGK+ +RK +K L G P +LG V R RGGN K R N
Sbjct: 13 KKPSGGKKRKVRKTKKKALGGGPPQIPKLGENDTRIVERVRGGNLKVRLREAKFANVYIP 72
Query: 193 SECSTRKTRIIDVVYNASNNDW 258
E + K +II ++ +N D+
Sbjct: 73 KERKSVKAKIISIISTPANPDF 94
>UniRef50_Q2NEU6 Cluster: 30S ribosomal protein S8e; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 30S ribosomal
protein S8e - Methanosphaera stadtmanae (strain DSM
3091)
Length = 126
Score = 37.9 bits (84), Expect = 0.21
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +1
Query: 19 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSE 198
R+ +G + + KR E GR A TR+G + + +RG TK RA N +
Sbjct: 10 RKPSGARSRRNKNKRNAEFGRNPAETRIGDEVKKEIVARGNCTKTRATVAKRINVIDPKD 69
Query: 199 CSTRKTRIIDVVYNASNN 252
S++ ++ V+ N +N+
Sbjct: 70 NSSKNVEMLTVLENGANS 87
>UniRef50_Q2W531 Cluster: TPR repeat; n=3; Magnetospirillum|Rep: TPR
repeat - Magnetospirillum magneticum (strain AMB-1 /
ATCC 700264)
Length = 556
Score = 36.7 bits (81), Expect = 0.49
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +1
Query: 25 ATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSR 135
A G +RAP K YE R AA TRL P + ++R R
Sbjct: 268 ALGAERAPANLKANYEKERDAAGTRLSPAELEALRGR 304
>UniRef50_A7F1W3 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 622
Score = 35.9 bits (79), Expect = 0.85
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -1
Query: 278 DKGLCTHQSLLDALYTTSMIRVLRVEHSDPQEKLPVS 168
D GL + L D +Y T I +R EH DP++ LP S
Sbjct: 302 DLGLADYNLLFDTIYATPPIARVRSEHEDPRDNLPDS 338
>UniRef50_UPI0000F2B19F Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 35.1 bits (77), Expect = 1.5
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +3
Query: 375 TEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLAWW 512
T EE I+NKK S+K +KY ++ AK+ L E F L W
Sbjct: 105 TPEEEEILNKKHSKKIQKKYEEWKKKAKISLLLREHFCQASSLPTW 150
>UniRef50_A1RX37 Cluster: Ribosomal protein S8e; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S8e - Thermofilum
pendens (strain Hrk 5)
Length = 128
Score = 35.1 bits (77), Expect = 1.5
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +1
Query: 19 RRATGG-KRAPIRKKRKYELGRPAANTRLGPQ-RIHSVRSRGGNTKYRALRLDTGNFSWG 192
R+ TGG K ++ KRKY GR T G + V++RG K + N
Sbjct: 10 RKITGGIKGRHVKTKRKYLSGRYPILTVPGQATEVKVVKARGNTYKLKVKVASEVNVYIP 69
Query: 193 SECSTRKTRIIDVVYNASNNDWCVQRPLSR 282
E T + +II V+ N SN D+ + +S+
Sbjct: 70 KEGKTVRAQIIKVLDNPSNKDFARRGIISK 99
>UniRef50_UPI0000DB7956 Cluster: PREDICTED: similar to Deformed
CG2189-PA; n=1; Apis mellifera|Rep: PREDICTED: similar
to Deformed CG2189-PA - Apis mellifera
Length = 284
Score = 34.7 bits (76), Expect = 2.0
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +2
Query: 5 ITGISEGPPVGNVRPYARRGSMS*GVPLQTPGSVLSVSTPFVHVVEILS 151
+TG+ EGPP G + GS+S P +P + L VS P +H I S
Sbjct: 230 VTGMMEGPPGGGPLGHIASGSISPLAPATSPSATLQVSAP-IHPPPIKS 277
>UniRef50_UPI0000F32D0C Cluster: Zinc finger CCCH domain-containing
protein 6.; n=1; Bos taurus|Rep: Zinc finger CCCH
domain-containing protein 6. - Bos Taurus
Length = 770
Score = 34.3 bits (75), Expect = 2.6
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +2
Query: 2 GITGISEGPPVGNVRPYARRGSMS*GVPLQTPGSVLS 112
G S GP G + PYA + S S G+PL TPGSVLS
Sbjct: 595 GAVPSSSGP--GALPPYAPKLSSSTGLPLGTPGSVLS 629
>UniRef50_Q8TN82 Cluster: Predicted protein; n=1; Methanosarcina
acetivorans|Rep: Predicted protein - Methanosarcina
acetivorans
Length = 90
Score = 33.1 bits (72), Expect = 6.0
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 324 YESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTA-RKYLARQRLAKVEGALEE 479
Y + +TL R + A EA E ++ K +K A K LA+ L K+EG LEE
Sbjct: 31 YRNIWTLNGSRNRSATSKEACEKLLAKNCLRKIACEKLLAKNCLRKIEGLLEE 83
>UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium
japonicum|Rep: Blr7583 protein - Bradyrhizobium
japonicum
Length = 261
Score = 32.7 bits (71), Expect = 7.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 288 IVVVDATPFRQWYESHYTLPLGRKK 362
++ +D PFR+W + TLPLG K
Sbjct: 22 VIAIDGDPFREWQRTSRTLPLGEVK 46
>UniRef50_A7D873 Cluster: Exodeoxyribonuclease III Xth; n=2;
Methylobacterium extorquens PA1|Rep:
Exodeoxyribonuclease III Xth - Methylobacterium
extorquens PA1
Length = 344
Score = 32.7 bits (71), Expect = 7.9
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 22 RATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL-DTGNFSWGSE 198
R G+R P+R++ + E RP A+ R P H+ R+R G R L + + F + S
Sbjct: 7 RGLAGRRGPLRRRGRRERLRPLADDR-RPALRHAARARPGGGGGRGLTVCEARRFRYRSG 65
Query: 199 CSTRKTRIIDV 231
S ++ I V
Sbjct: 66 SSRHASQAIPV 76
>UniRef50_A5UZX2 Cluster: Putative uncharacterized protein
precursor; n=2; Roseiflexus|Rep: Putative
uncharacterized protein precursor - Roseiflexus sp. RS-1
Length = 953
Score = 32.7 bits (71), Expect = 7.9
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +2
Query: 506 LVASRPGQCGRADGYILEGKELEFYLR 586
LV + PGQ GR+D Y + G EL FYLR
Sbjct: 854 LVGAEPGQEGRSDDYQVSG-ELRFYLR 879
>UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 620
Score = 32.7 bits (71), Expect = 7.9
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 303 ATPFRQWYESHYTLPLGRKKGAKLTEAE 386
ATPF Q + +HY L RKKG K+ E E
Sbjct: 374 ATPFYQTFLAHYIWQLKRKKGKKMKEDE 401
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 642,570,797
Number of Sequences: 1657284
Number of extensions: 12539197
Number of successful extensions: 35837
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 34582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35813
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -