Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40534
(653 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 175 2e-46
DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein ... 24 1.5
AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein ... 24 1.5
DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein ... 22 4.5
AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein ... 22 4.5
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 22 6.0
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 22 6.0
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 22 6.0
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 21 7.9
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 21 7.9
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 21 7.9
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 21 7.9
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 21 7.9
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 21 7.9
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 21 7.9
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 175 bits (427), Expect = 2e-46
Identities = 77/85 (90%), Positives = 83/85 (97%)
Frame = +1
Query: 1 RDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGN 180
RDHWHKRRATGGKR PIRKKRK+ELGRPAANT+LGPQRIH+VR+RGGN KYRALRLDTGN
Sbjct: 5 RDHWHKRRATGGKRKPIRKKRKFELGRPAANTKLGPQRIHTVRTRGGNKKYRALRLDTGN 64
Query: 181 FSWGSECSTRKTRIIDVVYNASNND 255
FSWGSEC+TRKTRIIDVVYNASNN+
Sbjct: 65 FSWGSECTTRKTRIIDVVYNASNNE 89
Score = 142 bits (344), Expect = 3e-36
Identities = 67/84 (79%), Positives = 73/84 (86%)
Frame = +3
Query: 255 LVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKY 434
LVRTKTLVKNAIV +DATPFRQWYE HY LPLGRK+GAKLTEAEE ++NKKRS+K KY
Sbjct: 90 LVRTKTLVKNAIVTIDATPFRQWYEGHYVLPLGRKRGAKLTEAEEEVLNKKRSKKAEAKY 149
Query: 435 LARQRLAKVEGALEEQFHTGRLLA 506
ARQR AKVE ALEEQF TGR+LA
Sbjct: 150 KARQRFAKVEPALEEQFATGRVLA 173
Score = 68.5 bits (160), Expect = 5e-14
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = +2
Query: 491 GAFAGLVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 610
G ++SRPGQCGR DGYILEGKELEFY+R+IKSK+AK
Sbjct: 169 GRVLACISSRPGQCGREDGYILEGKELEFYMRRIKSKKAK 208
>DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein 4
protein.
Length = 128
Score = 23.8 bits (49), Expect = 1.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -1
Query: 296 YNNCILDKGLCT 261
Y NC+LD+G CT
Sbjct: 46 YVNCLLDQGPCT 57
>AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein
protein.
Length = 128
Score = 23.8 bits (49), Expect = 1.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -1
Query: 296 YNNCILDKGLCT 261
Y NC+LD+G CT
Sbjct: 46 YVNCLLDQGPCT 57
>DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein 6
protein.
Length = 125
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -1
Query: 296 YNNCILDKGLCTHQ 255
Y C+LD+G CT++
Sbjct: 43 YIKCMLDEGPCTNE 56
>AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein
protein.
Length = 125
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -1
Query: 296 YNNCILDKGLCTHQ 255
Y C+LD+G CT++
Sbjct: 43 YIKCMLDEGPCTNE 56
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 329 LIPLPEWSCIYYNNC 285
L P P+WS Y++C
Sbjct: 104 LQPYPDWSFAKYDDC 118
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 329 LIPLPEWSCIYYNNC 285
L P P+WS Y++C
Sbjct: 104 LQPYPDWSFAKYDDC 118
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 329 LIPLPEWSCIYYNNC 285
L P P+WS Y++C
Sbjct: 104 LQPYPDWSFAKYDDC 118
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -1
Query: 329 LIPLPEWSCIYYNNC 285
L P P+WS Y +C
Sbjct: 109 LQPYPDWSFAKYEDC 123
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -1
Query: 329 LIPLPEWSCIYYNNC 285
L P P+WS Y +C
Sbjct: 110 LRPYPDWSFAKYEDC 124
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.4 bits (43), Expect = 7.9
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 462 EGALEEQFHTGRLLAWWRVAQV 527
EGAL H G +AW +V V
Sbjct: 238 EGALRCLAHNGGEIAWTKVIYV 259
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.4 bits (43), Expect = 7.9
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 462 EGALEEQFHTGRLLAWWRVAQV 527
EGAL H G +AW +V V
Sbjct: 238 EGALRCLAHNGGEIAWTKVIYV 259
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -1
Query: 329 LIPLPEWSCIYYNNC 285
L P P+WS Y +C
Sbjct: 108 LQPYPDWSWANYKDC 122
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.4 bits (43), Expect = 7.9
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 462 EGALEEQFHTGRLLAWWRVAQV 527
EGAL H G +AW +V V
Sbjct: 238 EGALRCLAHNGGEIAWTKVIYV 259
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -1
Query: 329 LIPLPEWSCIYYNNC 285
L P P+WS Y +C
Sbjct: 108 LQPYPDWSWANYKDC 122
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,950
Number of Sequences: 438
Number of extensions: 3436
Number of successful extensions: 20
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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