Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40532
(782 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 139 2e-33
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 139 2e-33
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 127 1e-29
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 127 1e-29
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 103 1e-22
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 81 1e-15
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 69 4e-12
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 69 4e-12
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 69 4e-12
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 66 2e-11
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 66 2e-11
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 66 2e-11
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 64 8e-11
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 61 8e-10
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 61 8e-10
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 59 4e-09
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 58 5e-09
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 58 5e-09
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 58 7e-09
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 58 7e-09
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 58 9e-09
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 58 9e-09
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 58 9e-09
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 55 7e-08
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 55 7e-08
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 54 9e-08
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 53 3e-07
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 49 3e-06
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 49 3e-06
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 49 3e-06
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 49 3e-06
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 49 4e-06
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 48 6e-06
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 46 3e-05
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 46 3e-05
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 46 3e-05
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 46 4e-05
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 46 4e-05
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 45 5e-05
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 44 2e-04
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 44 2e-04
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 44 2e-04
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 43 3e-04
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 41 0.001
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 39 0.005
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 39 0.005
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 36 0.043
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 34 0.13
AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical ... 33 0.17
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 31 0.70
AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical ... 31 0.70
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 30 1.6
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 30 2.1
U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division ... 29 5.0
AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical ... 29 5.0
Z95559-15|CAB63361.1| 917|Caenorhabditis elegans Hypothetical p... 28 6.6
U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical pr... 28 8.7
AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical... 28 8.7
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical... 28 8.7
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 139 bits (337), Expect = 2e-33
Identities = 65/88 (73%), Positives = 77/88 (87%)
Frame = +1
Query: 244 ALHPGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 423
A+ RDVIAQAQSGTGKTATFSIS+LQ +DT +RE QALIL+PTRELA QIQKVV+ALG
Sbjct: 59 AILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALG 118
Query: 424 DHLNAKCHACIGGTNVREDIRQLESGVH 507
D++N +CHACIGGTN+ EDIR+L+ G H
Sbjct: 119 DYMNVQCHACIGGTNLGEDIRKLDYGQH 146
Score = 112 bits (270), Expect = 2e-25
Identities = 50/87 (57%), Positives = 69/87 (79%)
Frame = +3
Query: 510 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 689
V GTPGRV+DMI RR L IKL VLDEADEML++GFK+Q++D+++ L QV+LLSA
Sbjct: 148 VSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLSA 207
Query: 690 TMPDDVLEVSRCFMRDPVRILVQKESL 770
T+P ++LE++ FM DP+RILV+++ L
Sbjct: 208 TLPHEILEMTSKFMTDPIRILVKRDEL 234
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/41 (70%), Positives = 33/41 (80%)
Frame = +2
Query: 140 VVETFDDMNLKXELLRGIYAYGFEKPSAIQQRAIMPCIQDA 262
V+ TFD M L+ +LLRGIYAYGFEKPSAIQQRA+ P I A
Sbjct: 24 VIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAV-PAILKA 63
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 139 bits (337), Expect = 2e-33
Identities = 65/88 (73%), Positives = 77/88 (87%)
Frame = +1
Query: 244 ALHPGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 423
A+ RDVIAQAQSGTGKTATFSIS+LQ +DT +RE QALIL+PTRELA QIQKVV+ALG
Sbjct: 59 AILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALG 118
Query: 424 DHLNAKCHACIGGTNVREDIRQLESGVH 507
D++N +CHACIGGTN+ EDIR+L+ G H
Sbjct: 119 DYMNVQCHACIGGTNLGEDIRKLDYGQH 146
Score = 112 bits (270), Expect = 2e-25
Identities = 50/87 (57%), Positives = 69/87 (79%)
Frame = +3
Query: 510 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 689
V GTPGRV+DMI RR L IKL VLDEADEML++GFK+Q++D+++ L QV+LLSA
Sbjct: 148 VSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLSA 207
Query: 690 TMPDDVLEVSRCFMRDPVRILVQKESL 770
T+P ++LE++ FM DP+RILV+++ L
Sbjct: 208 TLPHEILEMTSKFMTDPIRILVKRDEL 234
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/41 (70%), Positives = 33/41 (80%)
Frame = +2
Query: 140 VVETFDDMNLKXELLRGIYAYGFEKPSAIQQRAIMPCIQDA 262
++ TFD M L+ +LLRGIYAYGFEKPSAIQQRAI P I A
Sbjct: 24 IIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAI-PAILKA 63
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 127 bits (306), Expect = 1e-29
Identities = 60/87 (68%), Positives = 74/87 (85%)
Frame = +3
Query: 510 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 689
VVGTPGRV DMI R AL + IK+FVLDEADEMLSRGFKDQI++VF+ + DVQV+LLSA
Sbjct: 151 VVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQDVQVVLLSA 210
Query: 690 TMPDDVLEVSRCFMRDPVRILVQKESL 770
TMP +VL+V+ FMR+P+RILV+K+ L
Sbjct: 211 TMPSEVLDVTNRFMRNPIRILVKKDEL 237
Score = 122 bits (293), Expect = 4e-28
Identities = 58/84 (69%), Positives = 71/84 (84%)
Frame = +1
Query: 256 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 435
G+DVIAQAQSGTGKTATFS+SILQ+ID QAL++APTRELAQQIQKV+ ALG++LN
Sbjct: 66 GKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLN 125
Query: 436 AKCHACIGGTNVREDIRQLESGVH 507
CIGGT+VR+D R+LE+G+H
Sbjct: 126 VNILPCIGGTSVRDDQRKLEAGIH 149
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/46 (71%), Positives = 41/46 (89%)
Frame = +2
Query: 113 GTLDTDWDQVVETFDDMNLKXELLRGIYAYGFEKPSAIQQRAIMPC 250
G ++ ++DQVVE+FDDM LK ELLRGIY +GFEKPSAIQ+RAI+PC
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPC 63
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 127 bits (306), Expect = 1e-29
Identities = 60/87 (68%), Positives = 74/87 (85%)
Frame = +3
Query: 510 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 689
VVGTPGRV DMI R AL + IK+FVLDEADEMLSRGFKDQI++VF+ + DVQV+LLSA
Sbjct: 151 VVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQDVQVVLLSA 210
Query: 690 TMPDDVLEVSRCFMRDPVRILVQKESL 770
TMP +VL+V+ FMR+P+RILV+K+ L
Sbjct: 211 TMPSEVLDVTNRFMRNPIRILVKKDEL 237
Score = 122 bits (293), Expect = 4e-28
Identities = 58/84 (69%), Positives = 71/84 (84%)
Frame = +1
Query: 256 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 435
G+DVIAQAQSGTGKTATFS+SILQ+ID QAL++APTRELAQQIQKV+ ALG++LN
Sbjct: 66 GKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLN 125
Query: 436 AKCHACIGGTNVREDIRQLESGVH 507
CIGGT+VR+D R+LE+G+H
Sbjct: 126 VNILPCIGGTSVRDDQRKLEAGIH 149
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/46 (71%), Positives = 41/46 (89%)
Frame = +2
Query: 113 GTLDTDWDQVVETFDDMNLKXELLRGIYAYGFEKPSAIQQRAIMPC 250
G ++ ++DQVVE+FDDM LK ELLRGIY +GFEKPSAIQ+RAI+PC
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPC 63
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 103 bits (248), Expect = 1e-22
Identities = 50/87 (57%), Positives = 68/87 (78%)
Frame = +3
Query: 510 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 689
++GTP D ++ + IK+FVLDEADEMLS+GFKDQI++VF+ + DVQV+LLSA
Sbjct: 113 LMGTPK---DFLSNIPSDTSRIKMFVLDEADEMLSKGFKDQIYEVFRSMPQDVQVVLLSA 169
Query: 690 TMPDDVLEVSRCFMRDPVRILVQKESL 770
TMP +VL+V+ FMRDP+RILV+K+ L
Sbjct: 170 TMPSEVLDVTNRFMRDPIRILVKKDEL 196
Score = 54.8 bits (126), Expect = 7e-08
Identities = 29/75 (38%), Positives = 43/75 (57%)
Frame = +1
Query: 256 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 435
G+DV Q+Q+G+GKT I ILQ ID Q ++LAP R +AQ+ + + +LG +LN
Sbjct: 33 GKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQVILLAPQRGMAQRAHEQLKSLGRNLN 92
Query: 436 AKCHACIGGTNVRED 480
C+G E+
Sbjct: 93 VNA-TCLGFDTTAEN 106
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/51 (49%), Positives = 34/51 (66%)
Frame = +2
Query: 161 MNLKXELLRGIYAYGFEKPSAIQQRAIMPCIQDAMLSLKPSQELEKLLLSL 313
M LK ELLRGIY +GFEKPSAIQ+ A+ PC ++++ K ++SL
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISL 51
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 80.6 bits (190), Expect = 1e-15
Identities = 32/84 (38%), Positives = 57/84 (67%)
Frame = +1
Query: 256 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 435
G+D++A+A++GTGKT + I ++++I +++ QA+++ PTRELA Q ++ + L H+
Sbjct: 80 GQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVELSKHIQ 139
Query: 436 AKCHACIGGTNVREDIRQLESGVH 507
K GGT++R+DI +L VH
Sbjct: 140 LKVMVTTGGTDLRDDIMRLNGTVH 163
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/85 (34%), Positives = 46/85 (54%)
Frame = +3
Query: 510 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 689
V+ TPGR+ D++ + K VLDEAD++LS+ F+ + + L + QV+L SA
Sbjct: 165 VIATPGRILDLMEKGVAKMEHCKTLVLDEADKLLSQDFQGILDRLINFLPKERQVMLYSA 224
Query: 690 TMPDDVLEVSRCFMRDPVRILVQKE 764
T P+ V + M P I + +E
Sbjct: 225 TFPNTVTSFMQKHMHKPYEINLMEE 249
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2
Query: 152 FDDMNLKXELLRGIYAYGFEKPSAIQQRAI 241
F+D L +LL GI+ G+EKPS IQ+ +I
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASI 74
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 68.9 bits (161), Expect = 4e-12
Identities = 32/82 (39%), Positives = 49/82 (59%)
Frame = +3
Query: 510 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 689
VV TPGR+ DM+T++ ++ + VLDEAD ML GF+D+I +F A Q +L SA
Sbjct: 326 VVATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFEDEIKSIFYFFKAQRQTLLFSA 385
Query: 690 TMPDDVLEVSRCFMRDPVRILV 755
TMP + ++ + P+ + V
Sbjct: 386 TMPRKIQFFAKSALVKPIVVNV 407
Score = 48.8 bits (111), Expect = 4e-06
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 14/98 (14%)
Frame = +1
Query: 256 GRDVIAQAQSGTGKTATFSISIL-----QQIDTSIRECQ---ALILAPTRELAQQIQKVV 411
GRD+I A +G+GKT TF + ++ Q++ + LI+ P+RELA+QI ++
Sbjct: 227 GRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLI 286
Query: 412 IALGDHL------NAKCHACIGGTNVREDIRQLESGVH 507
I + D L + CIGG + E + + G+H
Sbjct: 287 IEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIH 324
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 68.9 bits (161), Expect = 4e-12
Identities = 35/84 (41%), Positives = 48/84 (57%)
Frame = +1
Query: 256 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 435
G D++ A++GTGKT F+I ILQ++ ALIL PTRELA QI + ALG +
Sbjct: 126 GSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPIT 185
Query: 436 AKCHACIGGTNVREDIRQLESGVH 507
KC +GG ++ R+L H
Sbjct: 186 LKCSVIVGGRSLIHQARELSERPH 209
Score = 54.8 bits (126), Expect = 7e-08
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Frame = +3
Query: 510 VVGTPGRVYDMITRR----ALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 677
VV TPGR+ D+I A I+ FVLDEAD ML + DQ+ +F+ +S Q +
Sbjct: 211 VVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFESISEKRQTL 270
Query: 678 LLSATMPDDVLEVSRCFMRDP 740
LLSAT+ +++ + R R P
Sbjct: 271 LLSATITNNINMLHRVSTRKP 291
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 68.9 bits (161), Expect = 4e-12
Identities = 35/84 (41%), Positives = 48/84 (57%)
Frame = +1
Query: 256 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 435
G D++ A++GTGKT F+I ILQ++ ALIL PTRELA QI + ALG +
Sbjct: 126 GSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPIT 185
Query: 436 AKCHACIGGTNVREDIRQLESGVH 507
KC +GG ++ R+L H
Sbjct: 186 LKCSVIVGGRSLIHQARELSERPH 209
Score = 54.8 bits (126), Expect = 7e-08
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Frame = +3
Query: 510 VVGTPGRVYDMITRR----ALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 677
VV TPGR+ D+I A I+ FVLDEAD ML + DQ+ +F+ +S Q +
Sbjct: 211 VVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFESISEKRQTL 270
Query: 678 LLSATMPDDVLEVSRCFMRDP 740
LLSAT+ +++ + R R P
Sbjct: 271 LLSATITNNINMLHRVSTRKP 291
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 66.5 bits (155), Expect = 2e-11
Identities = 36/76 (47%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Frame = +1
Query: 247 LHPGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGD 426
+ P ++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G
Sbjct: 245 MEPPSNLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGK 304
Query: 427 HL-NAKCHACIGGTNV 471
+ N K H I G N+
Sbjct: 305 FIDNLKIHYAIKGGNM 320
Score = 46.0 bits (104), Expect = 3e-05
Identities = 27/90 (30%), Positives = 52/90 (57%), Gaps = 5/90 (5%)
Frame = +3
Query: 510 VVGTPGRVYDMITR-RALHANTIKLFVLDEADEML-SRGFKDQIHDVFKML---SADVQV 674
V+GTPG D + + + + + I+ VLDEAD M+ +GF D ++ M+ S VQ
Sbjct: 333 VIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDASDSVQS 392
Query: 675 ILLSATMPDDVLEVSRCFMRDPVRILVQKE 764
+L SAT + V+ + +++ + +++++E
Sbjct: 393 MLFSATYDEPVINFATKIIKNAIVVMLKRE 422
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 66.5 bits (155), Expect = 2e-11
Identities = 36/76 (47%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Frame = +1
Query: 247 LHPGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGD 426
+ P ++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G
Sbjct: 270 MEPPSNLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGK 329
Query: 427 HL-NAKCHACIGGTNV 471
+ N K H I G N+
Sbjct: 330 FIDNLKIHYAIKGGNM 345
Score = 46.0 bits (104), Expect = 3e-05
Identities = 27/90 (30%), Positives = 52/90 (57%), Gaps = 5/90 (5%)
Frame = +3
Query: 510 VVGTPGRVYDMITR-RALHANTIKLFVLDEADEML-SRGFKDQIHDVFKML---SADVQV 674
V+GTPG D + + + + + I+ VLDEAD M+ +GF D ++ M+ S VQ
Sbjct: 358 VIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDASDSVQS 417
Query: 675 ILLSATMPDDVLEVSRCFMRDPVRILVQKE 764
+L SAT + V+ + +++ + +++++E
Sbjct: 418 MLFSATYDEPVINFATKIIKNAIVVMLKRE 447
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 66.5 bits (155), Expect = 2e-11
Identities = 36/76 (47%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Frame = +1
Query: 247 LHPGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGD 426
+ P ++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G
Sbjct: 654 MEPPSNLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGK 713
Query: 427 HL-NAKCHACIGGTNV 471
+ N K H I G N+
Sbjct: 714 FIDNLKIHYAIKGGNM 729
Score = 46.0 bits (104), Expect = 3e-05
Identities = 27/90 (30%), Positives = 52/90 (57%), Gaps = 5/90 (5%)
Frame = +3
Query: 510 VVGTPGRVYDMITR-RALHANTIKLFVLDEADEML-SRGFKDQIHDVFKML---SADVQV 674
V+GTPG D + + + + + I+ VLDEAD M+ +GF D ++ M+ S VQ
Sbjct: 742 VIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDASDSVQS 801
Query: 675 ILLSATMPDDVLEVSRCFMRDPVRILVQKE 764
+L SAT + V+ + +++ + +++++E
Sbjct: 802 MLFSATYDEPVINFATKIIKNAIVVMLKRE 831
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 64.5 bits (150), Expect = 8e-11
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = +3
Query: 510 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRG-FKDQIHDVFKMLSADVQVILLS 686
VVGTPGR+ + L + +K FVLDE D+M+ + + ++ KM QV++ S
Sbjct: 165 VVGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMMFS 224
Query: 687 ATMPDDVLEVSRCFMRDPVRILVQKES 767
AT+P ++ V + FM+DP+ + V E+
Sbjct: 225 ATLPKELRTVCKRFMQDPMEVYVDDEA 251
Score = 53.6 bits (123), Expect = 2e-07
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +1
Query: 256 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 432
G DV+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K +L
Sbjct: 78 GMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLP 137
Query: 433 NAKCHACIGGTNVREDIRQL 492
K GG +++D +L
Sbjct: 138 GVKVAVFFGGMAIKKDEERL 157
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 61.3 bits (142), Expect = 8e-10
Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Frame = +1
Query: 256 GRDVIAQAQSGTGKTATFSISILQQIDT-SIRECQALILAPTRELAQQIQKVVIALGDHL 432
G+DV+A +++G+GKTA F I +LQ++ +AL+++PTRELA Q KVV LG
Sbjct: 61 GKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFT 120
Query: 433 NAKCHACIGGTNVRE 477
+C +GG + E
Sbjct: 121 GLRCACLVGGDQIEE 135
Score = 58.0 bits (134), Expect = 7e-09
Identities = 29/101 (28%), Positives = 53/101 (52%)
Frame = +3
Query: 447 CLHWWHQCP*RYSPTGEWCSWVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 626
CL Q ++S E ++ TPGR+ +I L + ++ V DEAD + GF+
Sbjct: 126 CLVGGDQIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQ 185
Query: 627 DQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 749
DQ+ + K + Q +L SAT+P +++ ++ + DP+ +
Sbjct: 186 DQLTETLKRIPESRQTLLFSATLPKMLVDFAKAGLTDPMLV 226
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 61.3 bits (142), Expect = 8e-10
Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Frame = +1
Query: 256 GRDVIAQAQSGTGKTATFSISILQQIDT-SIRECQALILAPTRELAQQIQKVVIALGDHL 432
G+DV+A +++G+GKTA F I +LQ++ +AL+++PTRELA Q KVV LG
Sbjct: 61 GKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFT 120
Query: 433 NAKCHACIGGTNVRE 477
+C +GG + E
Sbjct: 121 GLRCACLVGGDQIEE 135
Score = 58.0 bits (134), Expect = 7e-09
Identities = 29/101 (28%), Positives = 53/101 (52%)
Frame = +3
Query: 447 CLHWWHQCP*RYSPTGEWCSWVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 626
CL Q ++S E ++ TPGR+ +I L + ++ V DEAD + GF+
Sbjct: 126 CLVGGDQIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQ 185
Query: 627 DQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 749
DQ+ + K + Q +L SAT+P +++ ++ + DP+ +
Sbjct: 186 DQLTETLKRIPESRQTLLFSATLPKMLVDFAKAGLTDPMLV 226
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 58.8 bits (136), Expect = 4e-09
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Frame = +3
Query: 510 VVGTPGRVYDMITRRA-LHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 686
+V TPGR+ + A + +++++ VLDEAD ML GF Q++ + L A+ Q +L S
Sbjct: 201 IVCTPGRLLQHMDENAQMSCDSLQVLVLDEADRMLDMGFSKQLNSIINNLPAERQTLLFS 260
Query: 687 ATMPDDVLEVSRCFMRDPVRILVQKES 767
AT +V ++ R DPV + V + +
Sbjct: 261 ATQTRNVKDLCRVCTNDPVFVSVHENA 287
Score = 48.4 bits (110), Expect = 6e-06
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Frame = +1
Query: 256 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ----ALILAPTRELAQQIQKVVIALG 423
G DV+ A++G+GKT I +L+ + + ALI++PTRELA Q + A+G
Sbjct: 113 GSDVVGAAKTGSGKTLALVIPVLEALWRAKWSPDYGLGALIISPTRELALQTFSTINAVG 172
Query: 424 DHLNAKCHACIGGTNVREDIRQLESGVH 507
H C IGG++V + R SG++
Sbjct: 173 AHHGFSCGLVIGGSDVAFE-RNRISGIN 199
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 58.4 bits (135), Expect = 5e-09
Identities = 27/76 (35%), Positives = 46/76 (60%)
Frame = +3
Query: 510 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 689
V+GTPGR+ ++ A++ + + FVLDEAD+++ F+D I+ + L QV + SA
Sbjct: 144 VIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMDEVFRDDINIIINSLPQIRQVAVFSA 203
Query: 690 TMPDDVLEVSRCFMRD 737
T P ++ + F+RD
Sbjct: 204 TYPRNLDNLLSTFLRD 219
Score = 55.2 bits (127), Expect = 5e-08
Identities = 26/70 (37%), Positives = 44/70 (62%)
Frame = +1
Query: 256 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 435
GRD++ QA+SGTGKT FS+ ++ +D+ Q +I+ PTRE++ QI++ V +
Sbjct: 59 GRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TG 117
Query: 436 AKCHACIGGT 465
A+ +GG+
Sbjct: 118 ARTSVYVGGS 127
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 58.4 bits (135), Expect = 5e-09
Identities = 27/76 (35%), Positives = 46/76 (60%)
Frame = +3
Query: 510 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 689
V+GTPGR+ ++ A++ + + FVLDEAD+++ F+D I+ + L QV + SA
Sbjct: 144 VIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMDEVFRDDINIIINSLPQIRQVAVFSA 203
Query: 690 TMPDDVLEVSRCFMRD 737
T P ++ + F+RD
Sbjct: 204 TYPRNLDNLLSTFLRD 219
Score = 55.2 bits (127), Expect = 5e-08
Identities = 26/70 (37%), Positives = 44/70 (62%)
Frame = +1
Query: 256 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 435
GRD++ QA+SGTGKT FS+ ++ +D+ Q +I+ PTRE++ QI++ V +
Sbjct: 59 GRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TG 117
Query: 436 AKCHACIGGT 465
A+ +GG+
Sbjct: 118 ARTSVYVGGS 127
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 58.0 bits (134), Expect = 7e-09
Identities = 28/76 (36%), Positives = 40/76 (52%)
Frame = +3
Query: 510 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 689
VV TPGR+ D + + VLDEAD ML GF+ QI + + D Q ++ SA
Sbjct: 256 VVATPGRLLDFLDNGTTNMKKCSYLVLDEADRMLDMGFEPQIKKIIGQIRPDRQTLMFSA 315
Query: 690 TMPDDVLEVSRCFMRD 737
T P +V ++ F +D
Sbjct: 316 TWPKEVRALASDFQKD 331
Score = 56.0 bits (129), Expect = 3e-08
Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Frame = +1
Query: 256 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-----LILAPTRELAQQIQKVVIAL 420
GRD+I+ A++G+GKT F + L I + L+L PTRELAQQ+Q+V I
Sbjct: 166 GRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDF 225
Query: 421 GDHLNAKCHACIGGTNVREDIRQLESGV 504
L K GG + R LE GV
Sbjct: 226 CHSLGLKMTCLFGGASKGPQARDLERGV 253
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 58.0 bits (134), Expect = 7e-09
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Frame = +3
Query: 510 VVGTPGRVYDMITR---RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 680
VV TPGR+ D++ + + + VLDEAD M +GF+ QI V + D Q +L
Sbjct: 431 VVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDKGFEPQIMKVVNNIRPDKQTVL 490
Query: 681 LSATMPDDVLEVSRCFMRDPVRILVQKESL 770
SAT P + ++R + PV ILV +S+
Sbjct: 491 FSATFPRHMEALARKVLDKPVEILVGGKSV 520
Score = 51.2 bits (117), Expect = 8e-07
Identities = 33/87 (37%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Frame = +1
Query: 256 GRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQ---ALILAPTRELAQQIQKVVIAL 420
GRDVI A++G+GKT F + + + I + E A+ILAPTRELA Q K
Sbjct: 341 GRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKF 400
Query: 421 GDHLNAKCHACIGGTNVREDIRQLESG 501
L K GG + E I L+ G
Sbjct: 401 AKPLGLKVACTYGGVGISEQIADLKRG 427
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 57.6 bits (133), Expect = 9e-09
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +3
Query: 510 VVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLSADVQVILLS 686
VVGTPGR+ + L + +K FVLDE D+M+ + + ++ KM QV++ S
Sbjct: 165 VVGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMMFS 224
Query: 687 ATMPDDVLEVSRCFMRDPVRILVQKE 764
AT+P ++ V + FM+D VR + E
Sbjct: 225 ATLPKELRTVCKRFMQD-VRFISDPE 249
Score = 53.6 bits (123), Expect = 2e-07
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +1
Query: 256 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 432
G DV+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K +L
Sbjct: 78 GMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLP 137
Query: 433 NAKCHACIGGTNVREDIRQL 492
K GG +++D +L
Sbjct: 138 GVKVAVFFGGMAIKKDEERL 157
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 57.6 bits (133), Expect = 9e-09
Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +3
Query: 510 VVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 686
+V TPGR+ D + + + +K ++DEAD +L+ F+ ++ + K++ + + L S
Sbjct: 166 IVATPGRLVDHLENTKGFNLKALKFLIMDEADRILNMDFEVELDKILKVIPRERRTYLFS 225
Query: 687 ATMPDDVLEVSRCFMRDPVRILV 755
ATM V ++ R +RDP R+ V
Sbjct: 226 ATMTKKVSKLERASLRDPARVSV 248
Score = 54.4 bits (125), Expect = 9e-08
Identities = 30/84 (35%), Positives = 44/84 (52%)
Frame = +1
Query: 256 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 435
G+DVI A++G+GKT F+I +LQ + + L+L PTRELA QI + ALG +
Sbjct: 81 GKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGIG 140
Query: 436 AKCHACIGGTNVREDIRQLESGVH 507
+GG ++ L H
Sbjct: 141 LIAAVIVGGVDMAAQAMALARRPH 164
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 57.6 bits (133), Expect = 9e-09
Identities = 33/86 (38%), Positives = 51/86 (59%)
Frame = +3
Query: 510 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 689
VVGTPGR+ + L + +K FVLDE D+M+ G D DV ++ QV++ SA
Sbjct: 164 VVGTPGRMLALARSGKLKLDKVKYFVLDECDKMI--GDADMRRDVQEI----KQVMMFSA 217
Query: 690 TMPDDVLEVSRCFMRDPVRILVQKES 767
T+P ++ V + FM+DP+ + V E+
Sbjct: 218 TLPKELRTVCKRFMQDPMEVYVDDEA 243
Score = 53.6 bits (123), Expect = 2e-07
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +1
Query: 256 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 432
G DV+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K +L
Sbjct: 77 GMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLP 136
Query: 433 NAKCHACIGGTNVREDIRQL 492
K GG +++D +L
Sbjct: 137 GVKVAVFFGGMAIKKDEERL 156
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 56.4 bits (130), Expect = 2e-08
Identities = 30/86 (34%), Positives = 44/86 (51%)
Frame = +3
Query: 495 EWCSWVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 674
E VV TPGR+ D++ A + V DEAD M GF+ Q+ + + D Q
Sbjct: 388 EGAEMVVCTPGRIIDLVKMGATNFLRTTFLVFDEADRMFDMGFEAQVKSISDHVRPDRQC 447
Query: 675 ILLSATMPDDVLEVSRCFMRDPVRIL 752
++ SAT V ++R + DPVRI+
Sbjct: 448 LMFSATFKQKVERLARDALVDPVRIV 473
Score = 37.9 bits (84), Expect = 0.008
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Frame = +1
Query: 256 GRDVIAQAQSGTGKTATF----SISILQQIDTSIRECQ-ALILAPTRELAQQI 399
GRDV+ A++G+GKTA + + I+ Q D E A+I+ PTRELA Q+
Sbjct: 302 GRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQV 354
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 54.8 bits (126), Expect = 7e-08
Identities = 26/78 (33%), Positives = 45/78 (57%)
Frame = +3
Query: 510 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 689
VV TPG++ M + R + + V+DEAD +LS G+++++ + L Q ++ SA
Sbjct: 150 VVTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEMIKIRSKLPPTYQCLMTSA 209
Query: 690 TMPDDVLEVSRCFMRDPV 743
T+ DD+ + + FM PV
Sbjct: 210 TLKDDMTTLKKLFMTGPV 227
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 54.8 bits (126), Expect = 7e-08
Identities = 26/78 (33%), Positives = 45/78 (57%)
Frame = +3
Query: 510 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 689
VV TPG++ M + R + + V+DEAD +LS G+++++ + L Q ++ SA
Sbjct: 217 VVTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEMIKIRSKLPPTYQCLMTSA 276
Query: 690 TMPDDVLEVSRCFMRDPV 743
T+ DD+ + + FM PV
Sbjct: 277 TLKDDMTTLKKLFMTGPV 294
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 7/65 (10%)
Frame = +1
Query: 259 RDVIAQAQSGTGKTATFSISILQQI-------DTSIRECQALILAPTRELAQQIQKVVIA 417
++++ +A++G+GKT F I ++Q++ D S+ A+I+APT+EL QI K+ +
Sbjct: 127 KNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGP-SAVIIAPTKELITQIYKLFVK 185
Query: 418 LGDHL 432
L L
Sbjct: 186 LSQAL 190
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +2
Query: 110 PGTLDTDWDQVVETFDDMNLKXELLRGIYAYGFEKPSAIQQRAIMPCIQD 259
P + D++ +TF D L +L+ I G+EK + +Q+ I +++
Sbjct: 77 PQVDEMDFEPEHKTFADFGLDERILKSIGELGWEKANQVQESVISLALEN 126
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 54.4 bits (125), Expect = 9e-08
Identities = 22/74 (29%), Positives = 47/74 (63%)
Frame = +3
Query: 546 TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRC 725
+R+ ++ VLDEAD ML F+DQ++++ ++ + + Q +L SATM +++ E++
Sbjct: 310 SRKICKIPNFQVLVLDEADRMLEEAFRDQMNELIRLCAQNRQTLLFSATMTEEIDELASM 369
Query: 726 FMRDPVRILVQKES 767
++ PV+I + + +
Sbjct: 370 SLQKPVKIFINENT 383
Score = 52.8 bits (121), Expect = 3e-07
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Frame = +1
Query: 256 GRDVIAQAQSGTGKTATFSISILQQIDTSIR--EC-QALILAPTRELAQQIQKVVIALGD 426
G+D+ A A +GTGKTA F + IL+++ + C + L+L PTRELA Q+ +V L
Sbjct: 185 GKDICACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLST 244
Query: 427 HLNAKCHACIGGTNVREDIRQLESG 501
+ + C GG +++ L SG
Sbjct: 245 FIQLEVCLCAGGLDLKAQEAALRSG 269
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +2
Query: 47 EDSKNGPSK-DQGSYDGPPGMDPG-TLDTDWDQVVETFDDMNLKXELLRGIYAYGFEKPS 220
E K+G SK Q + D + G +LDT V +F+ MNL ++L+ G+ P+
Sbjct: 116 EKRKSGKSKKSQENEDFFSALIDGKSLDTS---VNVSFEQMNLSRQILKACSGAGYSDPT 172
Query: 221 AIQQRAI 241
IQQ I
Sbjct: 173 PIQQACI 179
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 52.8 bits (121), Expect = 3e-07
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
Frame = +1
Query: 259 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQ----------ALILAPTRELAQQIQKV 408
RDVI A++G+GKTA F + +L I TS+ + + A+I+APTRELAQQI++
Sbjct: 339 RDVIGVAETGSGKTAAFLLPLLVWI-TSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEE 397
Query: 409 VIALGDHLNAKCHACIGGTNVREDIRQLESGV 504
G L K + IGG + + +L GV
Sbjct: 398 TNKFGKLLGIKTVSVIGGASREDQGMKLRMGV 429
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +3
Query: 510 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 656
V+ TPGR+ D++ R L N +LDEAD ML GF+ + V + +
Sbjct: 432 VIATPGRLLDVLENRYLLLNQCTYVILDEADRMLDMGFEPDVQKVLEYM 480
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 49.2 bits (112), Expect = 3e-06
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Frame = +3
Query: 510 VVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLS----ADVQV 674
+VGT GR+ + + + FVLDEAD M+ + GF I + S + Q
Sbjct: 472 IVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQT 531
Query: 675 ILLSATMPDDVLEVSRCFMRDP-VRILVQK 761
++ SAT PD V E +R F+R+ V I + K
Sbjct: 532 LMFSATFPDSVQEAARAFLRENYVMIAIDK 561
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Frame = +1
Query: 247 LHPGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQI 399
+H G D++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA QI
Sbjct: 375 VHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
Query: 400 QKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 501
+ GG V + Q+E G
Sbjct: 435 YNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKG 468
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 49.2 bits (112), Expect = 3e-06
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Frame = +3
Query: 510 VVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLS----ADVQV 674
+VGT GR+ + + + FVLDEAD M+ + GF I + S + Q
Sbjct: 472 IVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQT 531
Query: 675 ILLSATMPDDVLEVSRCFMRDP-VRILVQK 761
++ SAT PD V E +R F+R+ V I + K
Sbjct: 532 LMFSATFPDSVQEAARAFLRENYVMIAIDK 561
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Frame = +1
Query: 247 LHPGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQI 399
+H G D++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA QI
Sbjct: 375 VHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
Query: 400 QKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 501
+ GG V + Q+E G
Sbjct: 435 YNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKG 468
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/78 (33%), Positives = 42/78 (53%)
Frame = +3
Query: 510 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 689
V+ TPGR+ D+ + ++ VLDEAD ML GF+ I + + D V L SA
Sbjct: 216 VIATPGRLTDLSNDGVISLASVTYVVLDEADRMLDMGFEVAIRRILFEIRPDRLVALTSA 275
Query: 690 TMPDDVLEVSRCFMRDPV 743
T P+ V +++ + ++ V
Sbjct: 276 TWPEGVRKLTDKYTKEAV 293
Score = 41.1 bits (92), Expect = 9e-04
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Frame = +1
Query: 256 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-----------ALILAPTRELAQQIQ 402
G+D I +Q+G+GKT F + L ID + + + L+L+PTRELAQQI+
Sbjct: 121 GQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIE 180
Query: 403 KVVIALGDHLNAKCHACI-GGTNVREDIRQLESGV 504
V N C+ GG + E + GV
Sbjct: 181 GEVKKYS--YNGYKSVCLYGGGSRPEQVEACRGGV 213
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 49.2 bits (112), Expect = 3e-06
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Frame = +3
Query: 510 VVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLS----ADVQV 674
+VGT GR+ + + + FVLDEAD M+ + GF I + S + Q
Sbjct: 472 IVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQT 531
Query: 675 ILLSATMPDDVLEVSRCFMRDP-VRILVQK 761
++ SAT PD V E +R F+R+ V I + K
Sbjct: 532 LMFSATFPDSVQEAARAFLRENYVMIAIDK 561
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Frame = +1
Query: 247 LHPGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQI 399
+H G D++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA QI
Sbjct: 375 VHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
Query: 400 QKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 501
+ GG V + Q+E G
Sbjct: 435 YNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKG 468
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 48.8 bits (111), Expect = 4e-06
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Frame = +3
Query: 501 CSWVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVF---KMLSADVQ 671
C ++ TPGR+ D++ + + + VLDEAD ML GF+ QI + +M S + +
Sbjct: 302 CHILIATPGRLIDVMDQGLIGMEGCRYLVLDEADRMLDMGFEPQIRQIVECNRMPSKEER 361
Query: 672 V-ILLSATMPDDVLEVSRCFMRD 737
+ + SAT P ++ +++ F+++
Sbjct: 362 ITAMFSATFPKEIQLLAQDFLKE 384
Score = 37.5 bits (83), Expect = 0.011
Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 17/105 (16%)
Frame = +1
Query: 244 ALHPGRDVIAQAQSGTGKTATFSI----SILQQ----IDTSI-----RECQ---ALILAP 375
AL GRD+++ AQ+G+GKTA F + +ILQ + S+ R+ Q AL+L+P
Sbjct: 199 ALQGGRDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSP 258
Query: 376 TRELAQQIQKVVIALGDHLNAKCHACIGG-TNVREDIRQLESGVH 507
TREL+ QI GG N ++ I +L G H
Sbjct: 259 TRELSLQIFNESRKFAYRTPITSALLYGGRENYKDQIHKLRLGCH 303
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 48.4 bits (110), Expect = 6e-06
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Frame = +1
Query: 262 DVIAQAQSGTGKTATFSISILQQIDTSI---RECQALILAPTRELAQQIQKVVIALGDHL 432
DV+ ++ +G+GKT F + +++ I + + ALIL+P+REL QI V+ + L
Sbjct: 48 DVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVIQPFAEKL 107
Query: 433 NAKCHACIGGTNVREDIRQLES 498
N GG V ++I+ ++
Sbjct: 108 NLTVETVTGGQKVDKNIKMFKN 129
Score = 37.5 bits (83), Expect = 0.011
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Frame = +3
Query: 510 VVGTPGRVYDMI----TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 677
+V TPGR++ +I T A T++L V+DEAD F+D + ++ + +
Sbjct: 135 LVATPGRLFQIIQHEKTLIARKMRTLQLLVIDEADRFNEIQFEDHMREILSCIPKQRRTG 194
Query: 678 LLSATMPDDVLEVSRCFMRDPVRILVQKE 764
L SAT + ++ +R+ ++ V +E
Sbjct: 195 LFSATQVKEEDDLMVFGLRNAKQVKVAQE 223
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 46.0 bits (104), Expect = 3e-05
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 16/99 (16%)
Frame = +1
Query: 259 RDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTRELAQ 393
RD+++ AQ+G+GKTA F + I+Q I T+ R AL+L+PTRELA
Sbjct: 177 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 236
Query: 394 QIQKVVIALGDHLNAKCHACIGG-TNVREDIRQLESGVH 507
QI K N + GG N R+ + +L +G H
Sbjct: 237 QIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTH 275
Score = 44.4 bits (100), Expect = 9e-05
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +3
Query: 510 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKM---LSADVQVIL 680
++ TPGR+ D+I + + + VLDEAD ML GF+ QI + +
Sbjct: 277 LIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPKTARTTAM 336
Query: 681 LSATMPDDVLEVSRCFMRD 737
SAT P ++ +++ F++D
Sbjct: 337 FSATFPKEIQVLAKDFLKD 355
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 46.0 bits (104), Expect = 3e-05
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 16/99 (16%)
Frame = +1
Query: 259 RDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTRELAQ 393
RD+++ AQ+G+GKTA F + I+Q I T+ R AL+L+PTRELA
Sbjct: 161 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 220
Query: 394 QIQKVVIALGDHLNAKCHACIGG-TNVREDIRQLESGVH 507
QI K N + GG N R+ + +L +G H
Sbjct: 221 QIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTH 259
Score = 44.4 bits (100), Expect = 9e-05
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +3
Query: 510 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKM---LSADVQVIL 680
++ TPGR+ D+I + + + VLDEAD ML GF+ QI + +
Sbjct: 261 LIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPKTARTTAM 320
Query: 681 LSATMPDDVLEVSRCFMRD 737
SAT P ++ +++ F++D
Sbjct: 321 FSATFPKEIQVLAKDFLKD 339
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 46.0 bits (104), Expect = 3e-05
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 16/99 (16%)
Frame = +1
Query: 259 RDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTRELAQ 393
RD+++ AQ+G+GKTA F + I+Q I T+ R AL+L+PTRELA
Sbjct: 158 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 217
Query: 394 QIQKVVIALGDHLNAKCHACIGG-TNVREDIRQLESGVH 507
QI K N + GG N R+ + +L +G H
Sbjct: 218 QIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTH 256
Score = 44.4 bits (100), Expect = 9e-05
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +3
Query: 510 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKM---LSADVQVIL 680
++ TPGR+ D+I + + + VLDEAD ML GF+ QI + +
Sbjct: 258 LIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPKTARTTAM 317
Query: 681 LSATMPDDVLEVSRCFMRD 737
SAT P ++ +++ F++D
Sbjct: 318 FSATFPKEIQVLAKDFLKD 336
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 45.6 bits (103), Expect = 4e-05
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Frame = +3
Query: 501 CSWVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDV--FKMLSAD-- 665
C+ +VGT GRV A+ + + VLDEAD M+ S GF +I + +K + +
Sbjct: 426 CTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQIINYKNMPKNDK 485
Query: 666 VQVILLSATMPDDVLEVSRCFMRD 737
Q ++ SAT P V E +R +R+
Sbjct: 486 RQTMMFSATFPSSVQEAARKLLRE 509
Score = 39.9 bits (89), Expect = 0.002
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Frame = +1
Query: 256 GRDVIAQAQSGTGKTATFSISILQQI----DTSIRE---C--QALILAPTRELAQQIQKV 408
G+D++A AQ+G+GKTA F + I+ ++ D + C + +IL PTRELA QI
Sbjct: 335 GKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNE 394
Query: 409 VIALGDHLNAKCHACIGGTNVREDIRQLESG 501
+ GG NV + Q+ G
Sbjct: 395 GRKFSYQSVMEIKPVYGGINVGYNKSQIMKG 425
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 45.6 bits (103), Expect = 4e-05
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Frame = +3
Query: 501 CSWVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDV--FKMLSAD-- 665
C+ +VGT GRV A+ + + VLDEAD M+ S GF +I + +K + +
Sbjct: 426 CTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQIINYKNMPKNDK 485
Query: 666 VQVILLSATMPDDVLEVSRCFMRD 737
Q ++ SAT P V E +R +R+
Sbjct: 486 RQTMMFSATFPSSVQEAARKLLRE 509
Score = 39.9 bits (89), Expect = 0.002
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Frame = +1
Query: 256 GRDVIAQAQSGTGKTATFSISILQQI----DTSIRE---C--QALILAPTRELAQQIQKV 408
G+D++A AQ+G+GKTA F + I+ ++ D + C + +IL PTRELA QI
Sbjct: 335 GKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNE 394
Query: 409 VIALGDHLNAKCHACIGGTNVREDIRQLESG 501
+ GG NV + Q+ G
Sbjct: 395 GRKFSYQSVMEIKPVYGGINVGYNKSQIMKG 425
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 45.2 bits (102), Expect = 5e-05
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Frame = +3
Query: 504 SWVVGTPGRVYDMI--TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 677
S +V TPGR+ D + T L N +K ++DEAD +L GF+ ++ V + L Q +
Sbjct: 192 SILVATPGRLLDHLQNTDNFLVRN-MKCLIIDEADRILDIGFEIEMQQVLRHLPKQRQSM 250
Query: 678 LLSATMPDDVLEVSRCFMR-DPVRILVQKES 767
L SAT V E+ + + +PVR+ V +++
Sbjct: 251 LFSATHSPKVDELVKLALHSNPVRVSVHEKA 281
Score = 44.0 bits (99), Expect = 1e-04
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Frame = +1
Query: 256 GRDVIAQAQSGTGKTATF---SISILQQIDTSIRE-CQALILAPTRELAQQIQKVVIALG 423
G+DV+A A++G+GKT F +I +L +++ +I++PTREL+ Q V+ L
Sbjct: 105 GKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSELL 164
Query: 424 DHLNAKCHACIGGTNVREDIRQLESGV 504
+ N +GG+N + +L GV
Sbjct: 165 EGSNLTYGLVMGGSNRSAEKDKLAKGV 191
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 43.6 bits (98), Expect = 2e-04
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Frame = +3
Query: 510 VVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLS----ADVQV 674
+VGT GR+ + + + FVLDEAD M+ + GF I + S + Q
Sbjct: 683 IVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQT 742
Query: 675 ILLSATMPDDVLEVSRCFMRD 737
++ SAT PD V E +R +++
Sbjct: 743 LMFSATFPDSVQEAARNHLKE 763
Score = 41.1 bits (92), Expect = 9e-04
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Frame = +1
Query: 247 LHPGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQI 399
+H G D++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL QI
Sbjct: 586 IHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
Query: 400 QKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 501
+ GG V + Q+E G
Sbjct: 646 YNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKG 679
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 43.6 bits (98), Expect = 2e-04
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Frame = +3
Query: 510 VVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLS----ADVQV 674
+VGT GR+ + + + FVLDEAD M+ + GF I + S + Q
Sbjct: 683 IVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQT 742
Query: 675 ILLSATMPDDVLEVSRCFMRD 737
++ SAT PD V E +R +++
Sbjct: 743 LMFSATFPDSVQEAARNHLKE 763
Score = 41.1 bits (92), Expect = 9e-04
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Frame = +1
Query: 247 LHPGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQI 399
+H G D++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL QI
Sbjct: 586 IHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
Query: 400 QKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 501
+ GG V + Q+E G
Sbjct: 646 YNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKG 679
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 43.6 bits (98), Expect = 2e-04
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Frame = +3
Query: 510 VVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLS----ADVQV 674
+VGT GR+ + + + FVLDEAD M+ + GF I + S + Q
Sbjct: 683 IVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQT 742
Query: 675 ILLSATMPDDVLEVSRCFMRD 737
++ SAT PD V E +R +++
Sbjct: 743 LMFSATFPDSVQEAARNHLKE 763
Score = 41.1 bits (92), Expect = 9e-04
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Frame = +1
Query: 247 LHPGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQI 399
+H G D++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL QI
Sbjct: 586 IHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
Query: 400 QKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 501
+ GG V + Q+E G
Sbjct: 646 YNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKG 679
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 42.7 bits (96), Expect = 3e-04
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 10/62 (16%)
Frame = +1
Query: 256 GRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQ-----ALILAPTRELAQQIQK 405
G DV+ QA++ GKTA F + I+ +I +T + Q ALILAPTRELA QI +
Sbjct: 418 GHDVLGQAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHE 477
Query: 406 VV 411
+
Sbjct: 478 AL 479
Score = 34.7 bits (76), Expect = 0.075
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Frame = +3
Query: 501 CSWVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDV--------FKML 656
C ++GT GR+ D + + ++ V DEAD +L KD + + F
Sbjct: 510 CDILIGTCGRIMDFTVKSHISLLHLRFLVFDEADRLLQDMKKDPLGHLGAIIKDAGFMES 569
Query: 657 SADVQVILLSATMPDDVLEVSRCFMR 734
+A Q I+ SAT V+ V+ M+
Sbjct: 570 AATRQTIMTSATFNASVMTVANELMK 595
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 42.7 bits (96), Expect = 3e-04
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 11/84 (13%)
Frame = +1
Query: 244 ALHPGRDVIAQAQSGTGKTATFSISILQQI-----------DTSIRECQALILAPTRELA 390
A+ +DV+ A++G+GKT F I ++ ++ T +R +ALI+APTREL
Sbjct: 22 AVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELV 81
Query: 391 QQIQKVVIALGDHLNAKCHACIGG 462
QI K + AL + +GG
Sbjct: 82 IQIMKHINALISTTQLIATSIVGG 105
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 42.7 bits (96), Expect = 3e-04
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 11/84 (13%)
Frame = +1
Query: 244 ALHPGRDVIAQAQSGTGKTATFSISILQQI-----------DTSIRECQALILAPTRELA 390
A+ +DV+ A++G+GKT F I ++ ++ T +R +ALI+APTREL
Sbjct: 189 AVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELV 248
Query: 391 QQIQKVVIALGDHLNAKCHACIGG 462
QI K + AL + +GG
Sbjct: 249 IQIMKHINALISTTQLIATSIVGG 272
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +3
Query: 501 CSWVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLS--RGFKDQIHDVFKML 656
C VVGTP RV+D+I L ++ V+DE D+ L+ QI +F++L
Sbjct: 335 CDIVVGTPSRVFDLIHTGKLATKNLQFVVIDEIDQFLAGKNNCAHQIESIFRVL 388
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 244 ALHPGRDVIAQAQSGTGKTATFSISILQ 327
A+ G D + A++G+GKT FS+ I Q
Sbjct: 35 AILGGADALIAAETGSGKTGAFSLPIAQ 62
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 38.7 bits (86), Expect = 0.005
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 10/91 (10%)
Frame = +1
Query: 256 GRDVIAQAQSGTGKTATFSISILQQI------DTSIRE----CQALILAPTRELAQQIQK 405
G DV+A A +G+GKT F I + ++ D + + + LI+APTREL Q
Sbjct: 773 GNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFT 832
Query: 406 VVIALGDHLNAKCHACIGGTNVREDIRQLES 498
L KC GG + +++ L S
Sbjct: 833 TARQLTYETGLKCGLAFGGYSRNANVQHLRS 863
Score = 34.7 bits (76), Expect = 0.075
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +3
Query: 510 VVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLSADV-QVILL 683
+V T GR+ D + + + +K VLDEAD M+ S F +++ + Q +L
Sbjct: 870 LVATMGRLQDFVNAGEVSLSKMKYIVLDEADRMVDSNDFGEEVSKIIGSPGERTQQTVLF 929
Query: 684 SATMPDDV 707
SA+ +D+
Sbjct: 930 SASFSEDL 937
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 38.7 bits (86), Expect = 0.005
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 10/91 (10%)
Frame = +1
Query: 256 GRDVIAQAQSGTGKTATFSISILQQI------DTSIRE----CQALILAPTRELAQQIQK 405
G DV+A A +G+GKT F I + ++ D + + + LI+APTREL Q
Sbjct: 773 GNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFT 832
Query: 406 VVIALGDHLNAKCHACIGGTNVREDIRQLES 498
L KC GG + +++ L S
Sbjct: 833 TARQLTYETGLKCGLAFGGYSRNANVQHLRS 863
Score = 34.7 bits (76), Expect = 0.075
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +3
Query: 510 VVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLSADV-QVILL 683
+V T GR+ D + + + +K VLDEAD M+ S F +++ + Q +L
Sbjct: 870 LVATMGRLQDFVNAGEVSLSKMKYIVLDEADRMVDSNDFGEEVSKIIGSPGERTQQTVLF 929
Query: 684 SATMPDDV 707
SA+ +D+
Sbjct: 930 SASFSEDL 937
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 35.5 bits (78), Expect = 0.043
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +1
Query: 259 RDVIAQAQSGTGKTATFSISILQQIDTS-IRECQALILAPTRELAQQIQKVVIALGDHLN 435
RDV A +G+GKT + + +L + + + QA+IL P + L QI D
Sbjct: 157 RDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVPVQTLVAQIVDEFKRWNDESG 216
Query: 436 -AKCHACIGGTNVREDIRQLES 498
AK + G + ++ RQL S
Sbjct: 217 VAKVVSLSGANDFEKEARQLAS 238
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 10/56 (17%)
Frame = +1
Query: 259 RDVIAQAQSGTGKTATFSISILQQI----------DTSIRECQALILAPTRELAQQ 396
R+V+A A +G+GKT F++ ++ +I ++ + A++L PTRELA Q
Sbjct: 164 RNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical
protein C41D11.7 protein.
Length = 625
Score = 33.5 bits (73), Expect = 0.17
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +1
Query: 244 ALHPGRDVIA-QAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAL 420
AL+ R ++ Q GTGKT T ++ + + I ++ Q ++LAPTRE I+ +
Sbjct: 77 ALNENRKLVCIQGPPGTGKTFTLTLLLCRLIQ---QKKQVVVLAPTREALANIRMMTKKT 133
Query: 421 GDHLNAKCHA-CIGGTNVREDI 483
+ K H + TN D+
Sbjct: 134 LKRMGIKVHEHALMDTNEYRDV 155
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -2
Query: 508 HEHHSPVGEYLHG-HWCHQCKHGI*HSSDH 422
HEHH G++ HG H H HG HS H
Sbjct: 637 HEHHEHHGDHHHGSHGVHHGHHGTHHSLAH 666
>AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical
protein Y39A3B.5a protein.
Length = 582
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 107 PFPEVHRNYLDPSMAHFWNPLANLLTFFQTNKT 9
P P + + D FWN L+N LTF Q +KT
Sbjct: 338 PPPAIVASMTDEQKLSFWNKLSNKLTFSQQDKT 370
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 480 YSPTGEWCSWVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRG-FKDQIHDVFKML 656
Y T + C T G++ I + + + +K+ +LDE+D+M+ F + I V L
Sbjct: 216 YQFTKDQCDIAFCTMGKLKASIEDKTILLDNLKMMILDESDKMIDIACFGNDIDWVLDQL 275
Query: 657 SADV 668
DV
Sbjct: 276 QEDV 279
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/46 (28%), Positives = 29/46 (63%)
Frame = +1
Query: 262 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 399
+VI A +G+GKTA +++L+ + + E +A+ + P ++A ++
Sbjct: 1339 NVIVCAPNGSGKTAIAELAVLRHFENT-PEAKAVYITPMEDMATKV 1383
>U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division
cycle related protein6 protein.
Length = 518
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 265 VIAQAQSGTGKTATFSISILQQIDTSIREC 354
+ Q GTGKTAT ++ +L+ + S+R C
Sbjct: 198 IYVSGQPGTGKTAT-TMRVLKSLGKSVRSC 226
>AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical
protein Y39A3B.5c protein.
Length = 471
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 77 DPSMAHFWNPLANLLTFFQTNKT 9
D FWN L+N LTF Q +KT
Sbjct: 237 DEQKLSFWNKLSNKLTFSQQDKT 259
>Z95559-15|CAB63361.1| 917|Caenorhabditis elegans Hypothetical
protein Y41E3.11 protein.
Length = 917
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 546 LSYHIHDLECPPPMNTTLQLANIFT 472
L YH H + PPP TT Q A F+
Sbjct: 884 LMYHHHQMSAPPPPTTTPQQAPQFS 908
>U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical
protein F37C12.7 protein.
Length = 731
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +2
Query: 20 SERRSEDWPEDSKNGPSKD-QG-SYDGPPGMDPGTLDTDWDQVVETFDD 160
SER +W +D ++GP ++ QG + + PG D T+D W + VE +D+
Sbjct: 63 SERVKANWVDD-RDGPIRNIQGHASETFPGKD--TVDKVWRKCVELYDE 108
>AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical
protein Y105E8A.24b protein.
Length = 1127
Score = 27.9 bits (59), Expect = 8.7
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Frame = +1
Query: 238 NNALHPGRDVIAQAQSGTG----KTATF---SISILQQIDTSIRECQALILAPTRELAQQ 396
+NAL R + + G G TAT S+ +L++ + IRE Q +LA ELA++
Sbjct: 1012 DNALTKSRCALLERVRGGGAMMTSTATAVDDSMEMLRKKEKEIRELQQKVLADRDELAEK 1071
Query: 397 IQKVVIALGDHLNAK 441
QK + A + + K
Sbjct: 1072 -QKAIDAQEEEIQTK 1085
>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
protein Y105E8A.24a protein.
Length = 1161
Score = 27.9 bits (59), Expect = 8.7
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Frame = +1
Query: 238 NNALHPGRDVIAQAQSGTG----KTATF---SISILQQIDTSIRECQALILAPTRELAQQ 396
+NAL R + + G G TAT S+ +L++ + IRE Q +LA ELA++
Sbjct: 1012 DNALTKSRCALLERVRGGGAMMTSTATAVDDSMEMLRKKEKEIRELQQKVLADRDELAEK 1071
Query: 397 IQKVVIALGDHLNAK 441
QK + A + + K
Sbjct: 1072 -QKAIDAQEEEIQTK 1085
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,663,140
Number of Sequences: 27780
Number of extensions: 447998
Number of successful extensions: 1375
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 1213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1338
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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