Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40531
(749 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71; Eukaryo... 165 1e-39
UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep: ... 161 2e-38
UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellul... 151 1e-35
UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeb... 123 5e-27
UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3; Euka... 121 2e-26
UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3; Archaea... 113 4e-24
UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10; Archae... 111 2e-23
UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma j... 110 4e-23
UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1; ... 105 1e-21
UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1; Encephal... 103 6e-21
UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12; Archae... 103 6e-21
UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella... 99 6e-20
UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17; Euryar... 100 8e-20
UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus N... 93 5e-18
UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2; Crenarchaeot... 90 5e-17
UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4; Thermop... 89 8e-17
UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6; Thermop... 86 1e-15
UniRef50_Q95299 Cluster: Ribosomal protein L8; n=1; Sus scrofa|R... 81 3e-14
UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8 ... 79 9e-14
UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1; Nanoarc... 77 4e-13
UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular... 57 4e-07
UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90; Bacteri... 56 9e-07
UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2; n... 56 1e-06
UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;... 54 5e-06
UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellul... 54 5e-06
UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellul... 53 7e-06
UniRef50_A3LNH9 Cluster: Predicted protein; n=5; Saccharomycetac... 51 4e-05
UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus ... 50 6e-05
UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome. prec... 49 1e-04
UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and org... 48 2e-04
UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep... 47 6e-04
UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular org... 47 6e-04
UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;... 46 8e-04
UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis ... 44 0.003
UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5; Tracheophyta... 44 0.005
UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondri... 44 0.005
UniRef50_Q9TAJ4 Cluster: Ribosomal protein L2; n=1; Cafeteria ro... 43 0.007
UniRef50_Q9G8Q6 Cluster: Ribosomal protein L2; n=1; Naegleria gr... 43 0.007
UniRef50_O23283 Cluster: Putative uncharacterized protein; n=1; ... 43 0.009
UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264, ... 43 0.009
UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6; Eurotiom... 43 0.009
UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus C... 42 0.012
UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep... 42 0.012
UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17; Bacteri... 42 0.021
UniRef50_A7CUV2 Cluster: Ribosomal protein L2; n=1; Opitutaceae ... 41 0.028
UniRef50_Q9G4C8 Cluster: Ribosomal protein L2; n=1; Thraustochyt... 41 0.028
UniRef50_Q8LWZ7 Cluster: Ribosomal protein L2; n=3; Phaeophyceae... 41 0.028
UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2; Streptophyti... 41 0.028
UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10; Magnoli... 40 0.065
UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;... 40 0.065
UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellul... 40 0.086
UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288, w... 39 0.11
UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole gen... 39 0.11
UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondri... 39 0.11
UniRef50_A7NTF6 Cluster: Chromosome chr18 scaffold_1, whole geno... 39 0.15
UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3; Dictyostelii... 39 0.15
UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1; ... 39 0.15
UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma j... 38 0.26
UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2; Fi... 38 0.26
UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-P... 38 0.35
UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma g... 37 0.46
UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria tene... 37 0.46
UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas d... 37 0.61
UniRef50_A7AXH0 Cluster: Rpl2; n=1; Babesia bovis|Rep: Rpl2 - Ba... 37 0.61
UniRef50_Q9MG94 Cluster: Ribosomal protein L2; n=2; Chrysodidymu... 36 1.1
UniRef50_Q4UCG9 Cluster: 50S ribosomal protein L2, putative; n=8... 36 1.1
UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2; ... 36 1.1
UniRef50_A4Q378 Cluster: Translation protein SH3-like; n=1; Medi... 36 1.4
UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE454... 35 1.9
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 35 2.5
UniRef50_Q4P5V2 Cluster: Putative uncharacterized protein; n=1; ... 35 2.5
UniRef50_O60035 Cluster: Protein PDC2; n=4; Candida albicans|Rep... 35 2.5
UniRef50_Q951B6 Cluster: Ribosomal protein L2; n=5; Tetrahymena|... 34 3.3
UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2, mitoch... 34 4.3
UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome s... 34 4.3
UniRef50_A3UWP9 Cluster: Putative uncharacterized protein; n=3; ... 34 4.3
UniRef50_Q6Z3M9 Cluster: Putative uncharacterized protein OSJNBa... 34 4.3
UniRef50_A3JMF2 Cluster: Glycosyl transferase, family 2; n=1; Rh... 33 5.7
UniRef50_P15765 Cluster: Mitochondrial 60S ribosomal protein L2;... 33 5.7
UniRef50_Q9W349 Cluster: Protein lozenge; n=13; Eumetazoa|Rep: P... 33 5.7
UniRef50_A6NSE2 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial... 33 7.5
UniRef50_Q5DUX7 Cluster: Hydrogenosomal 60S ribosomal protein L2... 33 7.5
UniRef50_A2SS53 Cluster: Formate dehydrogenase family accessory ... 33 9.9
>UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71;
Eukaryota|Rep: 60S ribosomal protein L8 - Drosophila
melanogaster (Fruit fly)
Length = 256
Score = 165 bits (401), Expect = 1e-39
Identities = 76/81 (93%), Positives = 77/81 (95%)
Frame = +3
Query: 507 QGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRXVAMNPVEHPHGGGNHQHIGKA 686
+ MVGIVAGGGRIDKPILKAGRAYHKYKVKRN WP VR VAMNPVEHPHGGGNHQHIGKA
Sbjct: 163 RAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGKA 222
Query: 687 STVKRGTSAGRKVGLIAARRT 749
STVKRGTSAGRKVGLIAARRT
Sbjct: 223 STVKRGTSAGRKVGLIAARRT 243
Score = 152 bits (368), Expect = 1e-35
Identities = 66/86 (76%), Positives = 77/86 (89%)
Frame = +1
Query: 256 PEAYYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIG 435
PE +TGQFVYCG+KATL++GNVMP+ MPEGTI+CNLEEK GDRGRLAR SGN+ATVI
Sbjct: 79 PEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATVIA 138
Query: 436 HNPDAKRTRVKLPSGAKKVLPSSNKA 513
HN D K+TRVKLPSGAKKV+PS+N+A
Sbjct: 139 HNQDTKKTRVKLPSGAKKVVPSANRA 164
Score = 149 bits (360), Expect = 1e-34
Identities = 68/80 (85%), Positives = 74/80 (92%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAV
Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60
Query: 203 VHFRDPYKFKTRKELFIVPK 262
VHFRDPY++K RKELFI P+
Sbjct: 61 VHFRDPYRYKIRKELFIAPE 80
>UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep:
Ribosomal protein - Codakia orbicularis
Length = 234
Score = 161 bits (390), Expect = 2e-38
Identities = 72/81 (88%), Positives = 76/81 (93%)
Frame = +3
Query: 507 QGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRXVAMNPVEHPHGGGNHQHIGKA 686
+ +VGIVAGGGRIDKP+LKAGRAYHKYK KRNCWP VR VAMNPVEHPHGGGNHQHIGKA
Sbjct: 139 RAIVGIVAGGGRIDKPMLKAGRAYHKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKA 198
Query: 687 STVKRGTSAGRKVGLIAARRT 749
STV+R TSAGRKVGLIAARRT
Sbjct: 199 STVRRDTSAGRKVGLIAARRT 219
Score = 129 bits (312), Expect = 6e-29
Identities = 58/77 (75%), Positives = 66/77 (85%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIR+QRKG GSVF +HTK RKG LR++D+AERHGY+KGVVKDI+HDPGRGAPLA
Sbjct: 1 MGRVIRSQRKGPGSVFKAHTKHRKGKAALRAVDFAERHGYVKGVVKDIVHDPGRGAPLAK 60
Query: 203 VHFRDPYKFKTRKELFI 253
V FRDPYK+K R E FI
Sbjct: 61 VTFRDPYKYKMRTETFI 77
Score = 85.0 bits (201), Expect = 2e-15
Identities = 45/85 (52%), Positives = 56/85 (65%)
Frame = +1
Query: 259 EAYYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGH 438
E YTGQF+YCGKKA L++ RG+LARASGN+ATVI H
Sbjct: 80 EGMYTGQFIYCGKKANLQI------------------------RGKLARASGNYATVISH 115
Query: 439 NPDAKRTRVKLPSGAKKVLPSSNKA 513
NPD K++RVKLPSG+KKV+PS+N+A
Sbjct: 116 NPDTKKSRVKLPSGSKKVIPSANRA 140
>UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellular
organisms|Rep: 60S ribosomal protein L8 - Homo sapiens
(Human)
Length = 257
Score = 151 bits (367), Expect = 1e-35
Identities = 67/81 (82%), Positives = 72/81 (88%)
Frame = +3
Query: 507 QGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRXVAMNPVEHPHGGGNHQHIGKA 686
+ +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VR VAMNPVEHP GGGNHQHIGK
Sbjct: 163 RAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKP 222
Query: 687 STVKRGTSAGRKVGLIAARRT 749
ST++R AGRKVGLIAARRT
Sbjct: 223 STIRRDAPAGRKVGLIAARRT 243
Score = 144 bits (349), Expect = 2e-33
Identities = 64/85 (75%), Positives = 75/85 (88%)
Frame = +1
Query: 259 EAYYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGH 438
E +TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI H
Sbjct: 80 EGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISH 139
Query: 439 NPDAKRTRVKLPSGAKKVLPSSNKA 513
NP+ K+TRVKLPSG+KKV+ S+N+A
Sbjct: 140 NPETKKTRVKLPSGSKKVISSANRA 164
Score = 134 bits (323), Expect = 3e-30
Identities = 61/77 (79%), Positives = 68/77 (88%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 203 VHFRDPYKFKTRKELFI 253
V FRDPY+FK R ELFI
Sbjct: 61 VVFRDPYRFKKRTELFI 77
>UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeba
histolytica|Rep: 60S ribosomal protein L8 - Entamoeba
histolytica
Length = 158
Score = 123 bits (296), Expect = 5e-27
Identities = 53/85 (62%), Positives = 68/85 (80%)
Frame = +1
Query: 232 DKEGALHCPEAYYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARAS 411
DKE + C E Y+GQ++YCG KA+L +GNV+P+G PEGT+VCN+E K GDRG +ARAS
Sbjct: 63 DKELFI-CAEGLYSGQYIYCGSKASLHIGNVLPIGQCPEGTVVCNVESKPGDRGIIARAS 121
Query: 412 GNFATVIGHNPDAKRTRVKLPSGAK 486
GN+ATVI HN D + TR++LPSGAK
Sbjct: 122 GNYATVISHNADNETTRIRLPSGAK 146
Score = 50.0 bits (114), Expect = 6e-05
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = +2
Query: 146 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFI 253
+G+VK I HDPGRGAPLA V FR+P ++ KELFI
Sbjct: 33 RGLVKSIEHDPGRGAPLARVVFRNPRQYGLDKELFI 68
>UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3;
Eukaryota|Rep: 60S ribosomal protein KD4/L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 123
Score = 121 bits (291), Expect = 2e-26
Identities = 58/93 (62%), Positives = 69/93 (74%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIRAQRK AGSVF SHT RKG K RSLD+ ER+GY+KGVV +IIHDPGRGAPLA
Sbjct: 1 MGRVIRAQRKVAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
Query: 203 VHFRDPYKFKTRKELFIVPKPTTQANLFIVERK 301
V FR P++FK +KELF+ + T + +K
Sbjct: 61 VTFRHPFRFKKQKELFVXXEVCTPVSSLYCGKK 93
Score = 43.2 bits (97), Expect = 0.007
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +1
Query: 283 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDR 390
+YCGKKATL VGNV+P+ ++PEG + +G R
Sbjct: 88 LYCGKKATLVVGNVLPLRSIPEGAXCLQRRDHVGYR 123
>UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3;
Archaea|Rep: 50S ribosomal protein L2P - Aeropyrum
pernix
Length = 238
Score = 113 bits (272), Expect = 4e-24
Identities = 53/78 (67%), Positives = 59/78 (75%)
Frame = +3
Query: 516 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRXVAMNPVEHPHGGGNHQHIGKASTV 695
+GI AG GRI+KPI+KAG AYHK+KVK WP VR VAMN V+HP GGG HQH G+ STV
Sbjct: 156 IGIPAGAGRIEKPIMKAGFAYHKWKVKARKWPRVRGVAMNAVDHPFGGGRHQHKGRPSTV 215
Query: 696 KRGTSAGRKVGLIAARRT 749
R GRKVG IAARRT
Sbjct: 216 ARTAPPGRKVGHIAARRT 233
Score = 78.2 bits (184), Expect = 2e-13
Identities = 39/102 (38%), Positives = 61/102 (59%)
Frame = +1
Query: 208 LPRSIQVQDKEGALHCPEAYYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGD 387
L R ++ E + E Y GQ + G A E GN++P+G +PEGT V N+E + GD
Sbjct: 55 LARVVREDGVEFLMPAAEGMYVGQIIEIGPAAKPEAGNILPLGKIPEGTEVFNVELRPGD 114
Query: 388 RGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNKA 513
G+LAR +G++A V+G +T ++LPSG K +P+ ++A
Sbjct: 115 GGKLARQAGSYALVVGR--AGAKTILRLPSGKDKEVPNDSRA 154
Score = 35.9 bits (79), Expect = 1.1
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 23 MGRVIRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 199
MG+ +R QR G G+ + S G K L ++G V ++IHDPGR PLA
Sbjct: 1 MGKRLRQQRAGRGTPTYRSRAHIHPGPAKYPPLS----GDTLRGKVVELIHDPGRYVPLA 56
Query: 200 VVHFRDPYKF 229
V D +F
Sbjct: 57 RVVREDGVEF 66
>UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10;
Archaea|Rep: 50S ribosomal protein L2P - Sulfolobus
tokodaii
Length = 238
Score = 111 bits (267), Expect = 2e-23
Identities = 51/81 (62%), Positives = 59/81 (72%)
Frame = +3
Query: 507 QGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRXVAMNPVEHPHGGGNHQHIGKA 686
+ +VG+VAGGG +KP+LKAG Y KYKVK WP+VR VAMN V HPHGGG HQ + +
Sbjct: 152 RAIVGVVAGGGVTEKPLLKAGNNYWKYKVKAKKWPHVRGVAMNAVSHPHGGGLHQSVSRP 211
Query: 687 STVKRGTSAGRKVGLIAARRT 749
STV R GRKVG IAARRT
Sbjct: 212 STVSRNAPPGRKVGHIAARRT 232
Score = 63.7 bits (148), Expect = 5e-09
Identities = 32/84 (38%), Positives = 52/84 (61%)
Frame = +1
Query: 274 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 453
GQ + GK A + GN++ VG +PEGTI+ N+E+ GD G+ AR++G + V+G D
Sbjct: 76 GQKIQIGKNAAISNGNIVEVGNVPEGTIISNIEKTRGDGGKFARSAGTYGVVVGKTGD-- 133
Query: 454 RTRVKLPSGAKKVLPSSNKAWSVL 525
+ VKL S +K+ S+ A +++
Sbjct: 134 KVLVKLSS--EKIAQVSSNARAIV 155
Score = 42.3 bits (95), Expect = 0.012
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 199
MG+ + QR G G + F S + +R G K+ +++ G G V DI+H+PG APLA
Sbjct: 1 MGKKLLQQRAGRGGINFRSPSWRRVGKAKIPNIE-----GEHIGKVIDIVHNPGTNAPLA 55
Query: 200 VVHFRDPYKF 229
++ D KF
Sbjct: 56 LIKLDDGTKF 65
>UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07017 protein - Schistosoma
japonicum (Blood fluke)
Length = 112
Score = 110 bits (264), Expect = 4e-23
Identities = 50/69 (72%), Positives = 58/69 (84%)
Frame = +2
Query: 35 IRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 214
IR+QRKGAG VF +HTK RKGA +LR +D+AERHGYI+GVVK+IIHDPGRGAPLA V FR
Sbjct: 1 IRSQRKGAGGVFKAHTKHRKGAARLRPVDFAERHGYIRGVVKEIIHDPGRGAPLAKVAFR 60
Query: 215 DPYKFKTRK 241
D Y +K K
Sbjct: 61 DVYSYKLIK 69
>UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L2P - Ignicoccus hospitalis KIN4/I
Length = 251
Score = 105 bits (252), Expect = 1e-21
Identities = 49/83 (59%), Positives = 57/83 (68%)
Frame = +3
Query: 501 KQQGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRXVAMNPVEHPHGGGNHQHIG 680
K + +GI AG GR +KP+LKAG AY+K+K K WP VR VAMN V HPHGGGNHQ G
Sbjct: 155 KARATIGIAAGAGRDEKPLLKAGNAYYKWKAKAKKWPVVRGVAMNAVNHPHGGGNHQSPG 214
Query: 681 KASTVKRGTSAGRKVGLIAARRT 749
+TV R G+KVG IAAR T
Sbjct: 215 YPTTVARNAPPGQKVGHIAARCT 237
Score = 64.1 bits (149), Expect = 4e-09
Identities = 33/85 (38%), Positives = 53/85 (62%)
Frame = +1
Query: 259 EAYYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGH 438
E YTGQ V G A GN++P+ A+PEGT + N+E + GD G+LAR+ G +A ++G
Sbjct: 76 EGMYTGQKVQIGPNAAPVNGNILPLYAIPEGTQIFNVEIRPGDGGKLARSGGAYAILVGK 135
Query: 439 NPDAKRTRVKLPSGAKKVLPSSNKA 513
+ ++ ++LPSG K + + +A
Sbjct: 136 SGNS--AIIQLPSGKVKQVNAKARA 158
>UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L8 -
Encephalitozoon cuniculi
Length = 239
Score = 103 bits (246), Expect = 6e-21
Identities = 48/80 (60%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
Frame = +3
Query: 513 MVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRXVAMNPVEHPHGGGNHQHIGKAST 692
+VG+VAGGG DKP+LKA A++K K + + +P VR VAMNPVEH HGGGNHQH+GK +T
Sbjct: 151 IVGVVAGGGIHDKPLLKASVAHYKAKARGHVFPRVRGVAMNPVEHIHGGGNHQHVGKPTT 210
Query: 693 V-KRGTSAGRKVGLIAARRT 749
V K+ S +K+GL+ ARRT
Sbjct: 211 VSKKDISQEQKIGLVGARRT 230
Score = 66.1 bits (154), Expect = 9e-10
Identities = 29/94 (30%), Positives = 51/94 (54%)
Frame = +1
Query: 220 IQVQDKEGALHCPEAYYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRL 399
I ++ + + E YTGQ + G A +++GN+ + +PEG V ++E GD G
Sbjct: 53 ISFKEDDCMVPASEGMYTGQKILIGDDAPIDIGNITKIKNVPEGMAVNSVESVYGDGGTF 112
Query: 400 ARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPS 501
A +G+++ V+ H + T +K+PSG K + S
Sbjct: 113 AMVNGSYSLVVNHRKETNETVIKIPSGKKLTVSS 146
>UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12;
Archaea|Rep: 50S ribosomal protein L2P - Methanosarcina
acetivorans
Length = 238
Score = 103 bits (246), Expect = 6e-21
Identities = 49/83 (59%), Positives = 59/83 (71%)
Frame = +3
Query: 501 KQQGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRXVAMNPVEHPHGGGNHQHIG 680
K + +VGIVAG GR+D+P LKAG+ YHK K + +P V VAMNP +HP GGG +H G
Sbjct: 152 KCRAVVGIVAGSGRVDRPWLKAGKKYHKMKTRAAKYPRVSAVAMNPRDHPFGGGAWKHPG 211
Query: 681 KASTVKRGTSAGRKVGLIAARRT 749
K +TV R GRKVGLIAARRT
Sbjct: 212 KPTTVSRNAPPGRKVGLIAARRT 234
Score = 74.1 bits (174), Expect = 3e-12
Identities = 34/79 (43%), Positives = 49/79 (62%)
Frame = +1
Query: 259 EAYYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGH 438
E G + CG A ++ GN++P+G +PEG +CN+E K D G+ R+SG +ATV+ H
Sbjct: 73 EGIAVGNIIECGDDAEVKPGNIVPIGNVPEGFFICNVESKPNDGGKFVRSSGVYATVVTH 132
Query: 439 NPDAKRTRVKLPSGAKKVL 495
+A RT V +PSG K L
Sbjct: 133 --EATRTAVSMPSGNIKWL 149
>UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella
natans|Rep: Ribosomal protein L8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 281
Score = 99 bits (238), Expect = 6e-20
Identities = 43/78 (55%), Positives = 57/78 (73%)
Frame = +3
Query: 516 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRXVAMNPVEHPHGGGNHQHIGKASTV 695
+G+VAGGG+ +KP+LKAG+ Y+K+K +P V+ + HPHGGGNHQHIG STV
Sbjct: 192 IGVVAGGGKYEKPLLKAGKNYYKFKSLNKKYPIVKIFYLGKENHPHGGGNHQHIGHPSTV 251
Query: 696 KRGTSAGRKVGLIAARRT 749
R + G+KVGLIAARR+
Sbjct: 252 SRRSPPGQKVGLIAARRS 269
Score = 73.7 bits (173), Expect = 4e-12
Identities = 36/85 (42%), Positives = 52/85 (61%)
Frame = +1
Query: 259 EAYYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGH 438
E Y + + CG +A GNV+P+ +P G VCN+EEK GD G+LAR++G F V+ H
Sbjct: 106 EKLYLNKTIACGLQARPITGNVLPLFNIPNGVFVCNVEEKEGDGGKLARSAGAFVGVLSH 165
Query: 439 NPDAKRTRVKLPSGAKKVLPSSNKA 513
+ T++KLPS K+L S +A
Sbjct: 166 SKYNNVTKLKLPSKKIKILSSFCRA 190
Score = 40.7 bits (91), Expect = 0.037
Identities = 23/77 (29%), Positives = 36/77 (46%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MG++I AQRKG + +R G +S+ E++ IKG++ D + P
Sbjct: 27 MGKIISAQRKGKIGFQKQGSSRRIGKISYKSMTNEEKYSVIKGIISKFHIDTVKKVPAIK 86
Query: 203 VHFRDPYKFKTRKELFI 253
+ F FK EL+I
Sbjct: 87 IKFNVTKYFKNYYELYI 103
>UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17;
Euryarchaeota|Rep: 50S ribosomal protein L2P -
Methanopyrus kandleri
Length = 243
Score = 99.5 bits (237), Expect = 8e-20
Identities = 43/78 (55%), Positives = 57/78 (73%)
Frame = +3
Query: 516 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRXVAMNPVEHPHGGGNHQHIGKASTV 695
+G+++GGG+ +KP +KAG+ Y+ + K WP VR VAMN V+HP GGGNHQ GK +T+
Sbjct: 160 IGVMSGGGKREKPFVKAGKKYYHMRSKGGKWPKVRGVAMNAVDHPFGGGNHQSPGKPTTI 219
Query: 696 KRGTSAGRKVGLIAARRT 749
RG GRKVG IAAR+T
Sbjct: 220 ARGDPPGRKVGHIAARKT 237
Score = 70.9 bits (166), Expect = 3e-11
Identities = 34/82 (41%), Positives = 49/82 (59%)
Frame = +1
Query: 235 KEGALHCPEAYYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASG 414
+E + PE G + CG A ++ GN +P+ +PEG + N+E + GD G+ ARA G
Sbjct: 68 EERLILVPEGTKVGDIIECGVSAEIKPGNTLPLAEIPEGVPIFNIEGQPGDGGKFARAPG 127
Query: 415 NFATVIGHNPDAKRTRVKLPSG 480
+AT+I H D RT V+LPSG
Sbjct: 128 CYATIIAH--DVGRTYVQLPSG 147
Score = 49.2 bits (112), Expect = 1e-04
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +2
Query: 23 MGRVIRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 199
MG+ IR QR G G + + + + +G + R D E+ G + G V +++HDP R AP+A
Sbjct: 1 MGKRIRPQRLGRGGPTYRAPSHRYRGRIEHRPYDEQEKKGKVVGKVVELLHDPARNAPVA 60
Query: 200 VVHFRDPYKFKTRKELFIVPKPT 268
V F D + L +VP+ T
Sbjct: 61 RVRFED-----GEERLILVPEGT 78
>UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L2
- Candidatus Nitrosopumilus maritimus SCM1
Length = 244
Score = 93.5 bits (222), Expect = 5e-18
Identities = 41/83 (49%), Positives = 54/83 (65%)
Frame = +3
Query: 501 KQQGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRXVAMNPVEHPHGGGNHQHIG 680
K + M+G +AGGG ++P + AG + +K K +P VR VA HPHGGG HQH+G
Sbjct: 153 KNRAMIGTLAGGGASERPFMSAGGKWRNFKAKGKKYPIVRGVAQAAYVHPHGGGRHQHVG 212
Query: 681 KASTVKRGTSAGRKVGLIAARRT 749
++STV R T G KVG IAAR+T
Sbjct: 213 QSSTVSRDTPPGAKVGSIAARKT 235
Score = 66.1 bits (154), Expect = 9e-10
Identities = 32/80 (40%), Positives = 48/80 (60%)
Frame = +1
Query: 274 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 453
G+ + G K+ +E GNV+ + +P+GTIVCN+E+ GD G + +++G ATV H +
Sbjct: 79 GETLQFGLKSKIEKGNVISIQNIPDGTIVCNIEKHFGDGGAIVKSAGTDATVFSHGDEG- 137
Query: 454 RTRVKLPSGAKKVLPSSNKA 513
VKLPSG L N+A
Sbjct: 138 -VTVKLPSGKFTTLNPKNRA 156
Score = 33.1 bits (72), Expect = 7.5
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLR--SLDYAERHGYIKGVVKDIIHDPGRGAPL 196
MG+ +R+G G T K K +E+H +G + D++H+ GR APL
Sbjct: 1 MGKRPLVRRRGRGGNQFRSTSTGKVGTKANYPRFPLSEQH---EGEIIDLVHERGREAPL 57
Query: 197 AVVHFRD 217
A V F D
Sbjct: 58 AKVRFED 64
>UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2;
Crenarchaeota|Rep: Ribosomal protein L2 - Cenarchaeum
symbiosum
Length = 243
Score = 90.2 bits (214), Expect = 5e-17
Identities = 40/83 (48%), Positives = 54/83 (65%)
Frame = +3
Query: 501 KQQGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRXVAMNPVEHPHGGGNHQHIG 680
K + MVG +AGGG ++P + AG + +++ K +P VR VA HPHGGG HQH+G
Sbjct: 152 KNRAMVGTLAGGGVSERPFMSAGGKWRRFRSKGRKYPIVRGVAQAAYVHPHGGGRHQHVG 211
Query: 681 KASTVKRGTSAGRKVGLIAARRT 749
++STV R G KVG IAAR+T
Sbjct: 212 QSSTVSRNAPPGAKVGSIAARKT 234
Score = 57.2 bits (132), Expect = 4e-07
Identities = 30/80 (37%), Positives = 44/80 (55%)
Frame = +1
Query: 274 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 453
G + G K+ + GNV+ V +P+GT VCN+E+ GD G + +++G ATV H
Sbjct: 78 GSSMNFGLKSEIRDGNVISVQNIPDGTTVCNVEKHYGDGGAIVKSAGGNATVFSHGEGG- 136
Query: 454 RTRVKLPSGAKKVLPSSNKA 513
+KLPSG L N+A
Sbjct: 137 -VVLKLPSGRFSTLNPKNRA 155
Score = 35.9 bits (79), Expect = 1.1
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 199
MG+ +R+G G + F + T + K + + E+ +G V D++H+ GR APLA
Sbjct: 1 MGKRPLVRRRGRGGMQFRAATTGKIARAKYPAFELGEQR---EGTVIDLVHERGRDAPLA 57
Query: 200 VVHFRD 217
+ F D
Sbjct: 58 KIRFED 63
>UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L2P -
Thermoplasma volcanium
Length = 234
Score = 89.4 bits (212), Expect = 8e-17
Identities = 45/78 (57%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Frame = +3
Query: 516 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPY-VRXVAMNPVEHPHGGGNHQHIGKAST 692
VG+VA G ID PILKAG H + K PY VR VAMN V HPHGGGNHQH+G+ ST
Sbjct: 151 VGVVAASGIIDAPILKAGTHVHYLRSKAKR-PYTVRGVAMNAVNHPHGGGNHQHVGRPST 209
Query: 693 VKRGTSAGRKVGLIAARR 746
V R GRKVG ++ +R
Sbjct: 210 VGRNAPPGRKVGRLSPKR 227
Score = 54.8 bits (126), Expect = 2e-06
Identities = 26/74 (35%), Positives = 39/74 (52%)
Frame = +1
Query: 268 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPD 447
Y GQ + G T+ G + +P+G+ V N+E GD G R++G FA V+ H
Sbjct: 71 YVGQKIVAGNVDTINPGTTTVLANIPDGSYVYNIESSPGDGGEFCRSAGTFALVVSH--- 127
Query: 448 AKRTRVKLPSGAKK 489
R +KLPSG+ +
Sbjct: 128 GSRVTLKLPSGSMR 141
Score = 33.1 bits (72), Expect = 7.5
Identities = 23/58 (39%), Positives = 31/58 (53%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPL 196
MG+ I QR+G GS+ V + + ++ L E VVKDIIH PGR +PL
Sbjct: 1 MGKHIIPQRRGHGSL-VYRSPSHRHVVDVKHLKPGEY------VVKDIIHAPGRNSPL 51
>UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6;
Thermoproteales|Rep: 50S ribosomal protein L2P -
Pyrobaculum aerophilum
Length = 246
Score = 85.8 bits (203), Expect = 1e-15
Identities = 42/78 (53%), Positives = 53/78 (67%)
Frame = +3
Query: 516 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRXVAMNPVEHPHGGGNHQHIGKASTV 695
VGIVAGGGRI+KP LKAG+ YH+ + K +P VR AM+P HPHGGG+HQ G + V
Sbjct: 158 VGIVAGGGRIEKPFLKAGKKYHRARAKAWKYPTVRGKAMSPYAHPHGGGSHQKGG--TPV 215
Query: 696 KRGTSAGRKVGLIAARRT 749
+ G+KVG I +R T
Sbjct: 216 PKTAPPGQKVGFIGSRCT 233
Score = 83.4 bits (197), Expect = 5e-15
Identities = 37/88 (42%), Positives = 56/88 (63%)
Frame = +1
Query: 250 HCPEAYYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 429
+ E Y GQ V GK A+ + GN+M +G +PEGT++ N+E++ GD G+ ARA G +A V
Sbjct: 69 YAAEGLYVGQVVEIGKGASPKTGNIMILGEIPEGTMIFNVEKRAGDGGKFARAGGTYAVV 128
Query: 430 IGHNPDAKRTRVKLPSGAKKVLPSSNKA 513
IG P+ +T ++LPSG + S +A
Sbjct: 129 IGQKPEENKTIIRLPSGRTVEVDSRGRA 156
Score = 38.7 bits (86), Expect = 0.15
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 23 MGRVIRAQRKG-AGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 199
MG+ I QR+G GS F S + KR G + L GY V DI+H+PG AP+A
Sbjct: 1 MGKRILVQRRGRGGSQFRSPSWKRDGPVRYPPLGVISGKGY----VVDILHEPGLNAPVA 56
Query: 200 VV 205
+
Sbjct: 57 KI 58
>UniRef50_Q95299 Cluster: Ribosomal protein L8; n=1; Sus scrofa|Rep:
Ribosomal protein L8 - Sus scrofa (Pig)
Length = 106
Score = 81.0 bits (191), Expect = 3e-14
Identities = 37/79 (46%), Positives = 53/79 (67%)
Frame = -1
Query: 746 PASSNKTNFATSRCSSLDSGSLTYMLMVTTTVRMLYRVHGNTTYIWPAVTFDLVLVVCPS 567
PASSN+T+F SR S D +L+V T+ ML+RVHG+T + WPA+ L+LV+ +
Sbjct: 17 PASSNETHFPASRGISADGRGFANVLVVATSKGMLHRVHGHTPHAWPAIPLGLILVIGTA 76
Query: 566 SFQNRFVNTSTSSNNTDHA 510
QN VN +TSS++TDH+
Sbjct: 77 GLQNGLVNAATSSHHTDHS 95
>UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8
protein - Rattus norvegicus (Rat)
Length = 47
Score = 79.4 bits (187), Expect = 9e-14
Identities = 35/46 (76%), Positives = 41/46 (89%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVK 160
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VK
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVK 46
>UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L2P -
Nanoarchaeum equitans
Length = 238
Score = 77.4 bits (182), Expect = 4e-13
Identities = 34/81 (41%), Positives = 47/81 (58%)
Frame = +3
Query: 507 QGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRXVAMNPVEHPHGGGNHQHIGKA 686
+ ++G++AGGGR +KP +KAG Y+ + WP V V N +HP GG H + K
Sbjct: 154 RAVIGVIAGGGRKEKPFVKAGNKYYWASSRNRHWPVVNGVKKNASDHPFGGKRHSNHSKP 213
Query: 687 STVKRGTSAGRKVGLIAARRT 749
TV + GRKVG I AR+T
Sbjct: 214 FTVSKWAPPGRKVGYIGARKT 234
Score = 64.1 bits (149), Expect = 4e-09
Identities = 35/92 (38%), Positives = 52/92 (56%)
Frame = +1
Query: 238 EGALHCPEAYYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGN 417
+ L P G VY GK+A +G++ P+ +PEGT + LE GD G+L RASG+
Sbjct: 66 QSLLPAPLGISVGDTVYYGKEAPNAIGSIKPLSEIPEGTKIYMLENNPGDGGKLVRASGD 125
Query: 418 FATVIGHNPDAKRTRVKLPSGAKKVLPSSNKA 513
FA ++ D + V+LPSG K L ++ +A
Sbjct: 126 FALLVQKLGD--KVIVQLPSGQFKTLSANARA 155
>UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular
organisms|Rep: 50S ribosomal protein L2 - Mesoplasma
florum (Acholeplasma florum)
Length = 281
Score = 57.2 bits (132), Expect = 4e-07
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Frame = +1
Query: 274 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 453
G + + A ++VGN P+ +PEGT++ N+E K G G++AR++G ++G + D K
Sbjct: 114 GMKIVASEHADIKVGNAAPLKNIPEGTLIHNVELKPGKGGQMARSAGTSVQILGKDDDGK 173
Query: 454 RTRVKLPSG-AKKVL 495
++L SG +KVL
Sbjct: 174 YVTLRLTSGEVRKVL 188
Score = 36.7 bits (81), Expect = 0.61
Identities = 25/59 (42%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Frame = +3
Query: 588 KVKRNCW----PYVRXVAMNPVEHPHGGG-NHQHIGKASTVKRGTSAGRKVGLIAARRT 749
K RN W P VR MNP +HPHGGG IG+ S V T G+K + R T
Sbjct: 210 KAGRNRWRGIRPTVRGSVMNPNDHPHGGGEGRTPIGRKSPV---TPWGKKALGVKTRNT 265
>UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90;
Bacteria|Rep: 50S ribosomal protein L2 - Lactobacillus
plantarum
Length = 279
Score = 56.0 bits (129), Expect = 9e-07
Identities = 29/86 (33%), Positives = 52/86 (60%)
Frame = +1
Query: 256 PEAYYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIG 435
P+ G V G +A ++VGN +P+ +P GT++ N+E K G G+LAR++G A ++G
Sbjct: 107 PKGLEVGMQVQSGAEADIKVGNALPLTNIPVGTVIHNIELKPGKGGQLARSAGTSAQLLG 166
Query: 436 HNPDAKRTRVKLPSGAKKVLPSSNKA 513
+ K V+L SG +++ +++A
Sbjct: 167 --KEGKYAIVRLSSGEVRLVLLTSRA 190
Score = 33.5 bits (73), Expect = 5.7
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +3
Query: 561 KAGRAYHKYKVKRNCWPYVRXVAMNPVEHPHGGG 662
KAGR +++ KR P VR MNP +HPHGGG
Sbjct: 207 KAGRT--RWQGKR---PTVRGSVMNPNDHPHGGG 235
>UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2;
n=423; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 274
Score = 55.6 bits (128), Expect = 1e-06
Identities = 31/94 (32%), Positives = 51/94 (54%)
Frame = +1
Query: 232 DKEGALHCPEAYYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARAS 411
+K LH P G + G + +++GN +P+ MP GT + N+E +G G+LARA+
Sbjct: 98 EKRYILH-PRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAA 156
Query: 412 GNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNKA 513
G A +I + K +KLPSG +++ + A
Sbjct: 157 GAVAKLIA--KEGKSATLKLPSGEVRLISKNCSA 188
Score = 38.7 bits (86), Expect = 0.15
Identities = 16/24 (66%), Positives = 17/24 (70%), Gaps = 4/24 (16%)
Frame = +3
Query: 603 CW----PYVRXVAMNPVEHPHGGG 662
CW P VR V MNPV+HPHGGG
Sbjct: 210 CWLGKRPVVRGVVMNPVDHPHGGG 233
>UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;
n=2; Embryophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Marchantia polymorpha (Liverwort)
Length = 501
Score = 53.6 bits (123), Expect = 5e-06
Identities = 31/94 (32%), Positives = 47/94 (50%)
Frame = +1
Query: 232 DKEGALHCPEAYYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARAS 411
D + LH Y + + Y VGN +P+ +P GT V N+E G +L RA+
Sbjct: 332 DSQAWLHPRGDYASSENKYILDSYYQMVGNCIPLAKIPIGTWVHNIERNPGQGAKLTRAA 391
Query: 412 GNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNKA 513
G FA +I + + V+LPSG K++ S +A
Sbjct: 392 GTFAQIIQKVENTPQCIVRLPSGVDKLIDSRCRA 425
Score = 40.3 bits (90), Expect = 0.049
Identities = 24/60 (40%), Positives = 35/60 (58%)
Frame = +3
Query: 516 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRXVAMNPVEHPHGGGNHQHIGKASTV 695
+GIV+ + KAG++ ++ +R P VR VAMNPV+HPHGGG + G +V
Sbjct: 427 IGIVSNLNHGKRKFNKAGQS--RWLGRR---PIVRGVAMNPVDHPHGGGEGRTKGGRPSV 481
>UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellular
organisms|Rep: 50S ribosomal protein L2 - Brucella
melitensis
Length = 277
Score = 53.6 bits (123), Expect = 5e-06
Identities = 26/80 (32%), Positives = 46/80 (57%)
Frame = +1
Query: 256 PEAYYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIG 435
P+ G V G ++ GN MP+ +MP GTI+ N+E G G++AR++G +A ++G
Sbjct: 107 PQRLAVGDQVVAGNSVDVKPGNAMPLSSMPVGTIIHNVELMPGKGGQIARSAGTYAQLVG 166
Query: 436 HNPDAKRTRVKLPSGAKKVL 495
D ++L SG ++++
Sbjct: 167 R--DQGMAILRLNSGEQRLV 184
Score = 41.9 bits (94), Expect = 0.016
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +3
Query: 561 KAGRAYHKYKVKRNCWPYVRXVAMNPVEHPHGGGNHQHIG 680
KAGR+ ++ KR P+VR VAMNPV+HPHGGG + G
Sbjct: 207 KAGRSV--WRGKR---PHVRGVAMNPVDHPHGGGEGRTSG 241
>UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellular
organisms|Rep: 50S ribosomal protein L2 - Aquifex
aeolicus
Length = 304
Score = 53.2 bits (122), Expect = 7e-06
Identities = 25/63 (39%), Positives = 41/63 (65%)
Frame = +1
Query: 307 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 486
++ GN MP+ +PEGTIV N+E G G++ARA+G +A V+G + V++PSG
Sbjct: 149 IKPGNAMPLKYIPEGTIVHNIEFIPGKGGQIARAAGTWAQVLGRSTRKGYVLVRMPSGEV 208
Query: 487 KVL 495
+++
Sbjct: 209 RMI 211
Score = 39.1 bits (87), Expect = 0.11
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +3
Query: 609 PYVRXVAMNPVEHPHGGGNHQHIGK 683
P+ R AMNPV+HPHGGG + GK
Sbjct: 245 PHTRGTAMNPVDHPHGGGEGRTRGK 269
>UniRef50_A3LNH9 Cluster: Predicted protein; n=5;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 364
Score = 50.8 bits (116), Expect = 4e-05
Identities = 21/58 (36%), Positives = 38/58 (65%)
Frame = +1
Query: 307 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSG 480
++ GN +P+ +P G+I+ N+ G RG+L +A+G FA ++ +P+ K+ +KL SG
Sbjct: 212 MQRGNCLPLHMLPVGSIIHNIGLHPGGRGQLVKAAGTFARLLSKHPEEKKVVIKLSSG 269
Score = 37.5 bits (83), Expect = 0.35
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +3
Query: 561 KAGRAYHKYKVKRNCWPYVRXVAMNPVEHPHGGG 662
KAGR+ H+ K P VR VAMN +HPHGGG
Sbjct: 297 KAGRSRHRGKR-----PMVRGVAMNAFDHPHGGG 325
>UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein L2 - Chlorokybus
atmophyticus (Soil alga)
Length = 368
Score = 50.0 bits (114), Expect = 6e-05
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +1
Query: 274 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI-GHNPDA 450
G FV G + GN +P+ ++P GT+V N+E G G++ RA+G A +I HN
Sbjct: 207 GDFVSSGPNVEIRTGNALPLISIPLGTLVHNIELYPGSGGQVVRAAGTSAQLIKKHN--- 263
Query: 451 KRTRVKLPSGAKKVLP 498
K ++LPSG K P
Sbjct: 264 KYAILRLPSGELKSFP 279
Score = 41.5 bits (93), Expect = 0.021
Identities = 23/60 (38%), Positives = 35/60 (58%)
Frame = +3
Query: 516 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRXVAMNPVEHPHGGGNHQHIGKASTV 695
+GIV+ + + KAG + ++ +R P VR VAMNP++HPHGGG + G +V
Sbjct: 286 IGIVSNLNHFNTDLKKAGAS--RWLGRR---PTVRGVAMNPIDHPHGGGEGRTSGGRPSV 340
>UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome.
precursor; n=9; Pezizomycotina|Rep: Contig An01c0260,
complete genome. precursor - Aspergillus niger
Length = 414
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/60 (36%), Positives = 37/60 (61%)
Frame = +1
Query: 316 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 495
GN +P+ MP GT+V N+ + G G+L R++G FATVI ++ ++L SG +++
Sbjct: 213 GNCLPLHMMPVGTLVFNVGLRPGQGGQLCRSAGTFATVIAKERISQHVTIRLQSGEVRLI 272
Score = 35.5 bits (78), Expect = 1.4
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +3
Query: 516 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRXVAMNPVEHPHGGGNHQHIG 680
VG+ + + + KAGR+ N P VR +AMN EHPHGGG + G
Sbjct: 280 VGVASNPNHQYRQLGKAGRSRWL-----NIRPTVRGLAMNAAEHPHGGGRGKSKG 329
>UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and
organelle form; n=5; cellular organisms|Rep: Ribosomal
protein L2, bacterial and organelle form - Ostreococcus
tauri
Length = 294
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/80 (30%), Positives = 45/80 (56%)
Frame = +1
Query: 256 PEAYYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIG 435
P G + G ++ ++VGN +P+ +P T + N+E G G+L R++G+ AT++
Sbjct: 133 PHGSTPGDALESGPESDIKVGNALPLKNIPLQTTIHNIELVPGRGGQLCRSAGSAATLVK 192
Query: 436 HNPDAKRTRVKLPSGAKKVL 495
D V+LPSG ++++
Sbjct: 193 KADDGGYCVVRLPSGEQRLV 212
>UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep:
Ribosomal protein L2 - Zea mays (Maize)
Length = 448
Score = 46.8 bits (106), Expect = 6e-04
Identities = 26/64 (40%), Positives = 40/64 (62%)
Frame = +1
Query: 310 EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKK 489
+VGN +P+ GT V N+E + G G++ RA+G +A V+ P AK ++LPSGA+K
Sbjct: 295 KVGNCIPLANARIGTWVHNIECRPGQGGKMVRAAGTYAKVV-QEPGAKCV-LRLPSGAEK 352
Query: 490 VLPS 501
+ S
Sbjct: 353 AVDS 356
Score = 45.6 bits (103), Expect = 0.001
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Frame = +3
Query: 516 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRXVAMNPVEHPHGGGNHQHIGKASTV 695
+GIV+ + + KAG + ++ +R P VR VAMNPV+HPHGGG + G +V
Sbjct: 362 IGIVSNPSHGTRKLRKAGHS--RWLGRR---PVVRGVAMNPVDHPHGGGEGRTKGGRPSV 416
Query: 696 K---RGTSAGRKVGLIAARR 746
+ T AG + +A+R+
Sbjct: 417 SPWGKPTKAGYRSPSVASRK 436
>UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular
organisms|Rep: Ribosomal protein L2 - Physcomitrella
patens (Moss)
Length = 463
Score = 46.8 bits (106), Expect = 6e-04
Identities = 25/67 (37%), Positives = 38/67 (56%)
Frame = +1
Query: 313 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 492
VGN + + +P GT V N+E G +L RA+G FA +I + + V+LPSG K+
Sbjct: 321 VGNCVSLANIPIGTWVHNIEWNPGQGAKLIRAAGTFAQIIKKFENTPQCIVRLPSGVDKL 380
Query: 493 LPSSNKA 513
+ S +A
Sbjct: 381 IDSRCRA 387
Score = 40.3 bits (90), Expect = 0.049
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = +3
Query: 516 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRXVAMNPVEHPHGGGNHQHIGKASTV 695
VGIV+ + + KAG++ ++ +R P VR VAMNPV+HPHGGG + G +V
Sbjct: 389 VGIVSNLHHGKRKLDKAGQS--RWLGRR---PIVRGVAMNPVDHPHGGGEGRTKGGRPSV 443
>UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;
n=24; Spermatophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Oryza sativa subsp. japonica (Rice)
Length = 502
Score = 46.4 bits (105), Expect = 8e-04
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Frame = +3
Query: 516 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRXVAMNPVEHPHGGGNHQHIGKASTV 695
+GIV+ + + KAG++ ++ +R P VR VAMNPV+HPHGGG + G +V
Sbjct: 426 IGIVSNPNHGARKLRKAGQS--RWSGRR---PIVRGVAMNPVDHPHGGGEGRTKGGRPSV 480
Query: 696 K---RGTSAGRKVGLIAARR 746
+ T AG + G+ +R
Sbjct: 481 SPWGKPTKAGFRAGVGVGKR 500
Score = 44.4 bits (100), Expect = 0.003
Identities = 25/68 (36%), Positives = 41/68 (60%)
Frame = +1
Query: 310 EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKK 489
+VGN +P+ + GT V ++E G +LARA+G +A +I A + V+LPSG +K
Sbjct: 359 KVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKII--KEPASQCLVRLPSGVEK 416
Query: 490 VLPSSNKA 513
++ S +A
Sbjct: 417 LIDSRCRA 424
>UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 128
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = +1
Query: 259 EAYYTGQFVYCGKKATLEVGNVMPVGAMPEG 351
E+ YTGQFV C KKATL V NV+P+ + PEG
Sbjct: 46 ESIYTGQFVCCSKKATLIVDNVLPLRSTPEG 76
>UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 185
Score = 46.0 bits (104), Expect = 0.001
Identities = 22/55 (40%), Positives = 34/55 (61%)
Frame = -3
Query: 393 TSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVVGFGTMKSSFLVL 229
T++TH + +AHNGTL S R +I+N + L+TI++L V G + FL+L
Sbjct: 7 TTVTHMVLNVAHNGTLGDGSKRQYIANNEIGLLATIDELVGVHALGGDEQLFLML 61
>UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 169
Score = 44.4 bits (100), Expect = 0.003
Identities = 23/67 (34%), Positives = 38/67 (56%)
Frame = +1
Query: 313 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 492
+G+ MP+G M GTI+ N+E G ++ RA+G A ++ P + +KLPSG K
Sbjct: 14 IGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKIL-KEPAKGKCLIKLPSGDTKW 72
Query: 493 LPSSNKA 513
+ + +A
Sbjct: 73 INAKCRA 79
Score = 37.9 bits (84), Expect = 0.26
Identities = 17/30 (56%), Positives = 20/30 (66%), Gaps = 4/30 (13%)
Frame = +3
Query: 585 YKVKRNCW----PYVRXVAMNPVEHPHGGG 662
YK ++ W P VR VAMNP +HPHGGG
Sbjct: 95 YKAGQSRWLGIRPKVRGVAMNPCDHPHGGG 124
>UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5;
Tracheophyta|Rep: Ribosomal protein L2 - Selaginella
uncinata (Blue spikemoss) (Peacock spikemoss)
Length = 282
Score = 43.6 bits (98), Expect = 0.005
Identities = 28/92 (30%), Positives = 42/92 (45%)
Frame = +1
Query: 238 EGALHCPEAYYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGN 417
+G + PE G + G A VGN P MP GT++ +E G G+ ARA+G
Sbjct: 101 KGYISHPEGIRVGDAIPTGPGAPTTVGNAPPPTHMPLGTVMHGIEVAPGKGGQSARAAGA 160
Query: 418 FATVIGHNPDAKRTRVKLPSGAKKVLPSSNKA 513
A + + +R LP G + +P + A
Sbjct: 161 PAKPVAKEGQSATSR--LPPGEVRSIPQNRPA 190
Score = 39.5 bits (88), Expect = 0.086
Identities = 21/52 (40%), Positives = 26/52 (50%)
Frame = +3
Query: 507 QGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRXVAMNPVEHPHGGG 662
Q +V G +D +G+A K P VR V MNPV+HPHGGG
Sbjct: 186 QNRPAVVGQAGNVDSKNRASGKAGSKRWPGSR--PRVRGVVMNPVDHPHGGG 235
>UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondrial
precursor; n=6; Ascomycota|Rep: 54S ribosomal protein
RML2, mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 393
Score = 43.6 bits (98), Expect = 0.005
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +1
Query: 304 TLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSG 480
T + GN +P+ +P GTI+ N+ G+ R++G +A V+ P+ K+ V+L SG
Sbjct: 234 TTQRGNCLPISMIPIGTIIHNVGITPVGPGKFCRSAGTYARVLAKLPEKKKAIVRLQSG 292
Score = 37.1 bits (82), Expect = 0.46
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Frame = +3
Query: 459 KSKATVWSQEGS----AIKQQGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRXV 626
K KA V Q G +++ +G+V+ ++ + KAGR+ ++ R P VR V
Sbjct: 282 KKKAIVRLQSGEHRYVSLEAVATIGVVSNIDHQNRSLGKAGRS--RWLGIR---PTVRGV 336
Query: 627 AMNPVEHPHGGG 662
AMN +HPHGGG
Sbjct: 337 AMNKCDHPHGGG 348
>UniRef50_Q9TAJ4 Cluster: Ribosomal protein L2; n=1; Cafeteria
roenbergensis|Rep: Ribosomal protein L2 - Cafeteria
roenbergensis
Length = 252
Score = 43.2 bits (97), Expect = 0.007
Identities = 28/82 (34%), Positives = 43/82 (52%)
Frame = +3
Query: 504 QQGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRXVAMNPVEHPHGGGNHQHIGK 683
Q + G G ++ + + AGR+ ++ KR P VR VAMNP++HPHGGG + G
Sbjct: 166 QSAVKGANLGNTKLFEKLKMAGRS--RWLSKR---PSVRGVAMNPIDHPHGGGEGKTSGG 220
Query: 684 ASTVKRGTSAGRKVGLIAARRT 749
+V + GR + R+T
Sbjct: 221 RPSVSKW---GRLTKNVKTRKT 239
>UniRef50_Q9G8Q6 Cluster: Ribosomal protein L2; n=1; Naegleria
gruberi|Rep: Ribosomal protein L2 - Naegleria gruberi
Length = 268
Score = 43.2 bits (97), Expect = 0.007
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = +3
Query: 531 GGGRIDKPILKAGRAYHKYKVKRNCW----PYVRXVAMNPVEHPHGGGNHQHIGKASTVK 698
G G + K R + K R+ W P VR VAMNPV+HPHGGG + KAS
Sbjct: 192 GFGTLGKTSNLMQRNVNLGKAGRSRWLGIRPTVRGVAMNPVDHPHGGGEGKKSKKASPTN 251
Query: 699 RGTS 710
+ S
Sbjct: 252 KWAS 255
>UniRef50_O23283 Cluster: Putative uncharacterized protein; n=1;
Arabidopsis thaliana|Rep: Putative uncharacterized
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 724
Score = 42.7 bits (96), Expect = 0.009
Identities = 19/27 (70%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +3
Query: 582 KYKVKRNCWPYVRXVAM-NPVEHPHGG 659
K +KRN W VR VAM NPVEHPHGG
Sbjct: 411 KLMIKRNMWAKVRGVAMMNPVEHPHGG 437
>UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_3264, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 66
Score = 42.7 bits (96), Expect = 0.009
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRK 94
MGRVIRAQRKG GS+F SHT RK
Sbjct: 1 MGRVIRAQRKGVGSIFKSHTHHRK 24
>UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6;
Eurotiomycetidae|Rep: 50S ribosomal protein L2 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 404
Score = 42.7 bits (96), Expect = 0.009
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +1
Query: 316 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 453
GN +P+ +P GT++ N+ + G G+L R++G +ATVI D K
Sbjct: 212 GNCLPLHMIPVGTLIFNVGLRPGKGGQLCRSAGTYATVISKGSDTK 257
Score = 34.3 bits (75), Expect = 3.3
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +3
Query: 516 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRXVAMNPVEHPHGGGNHQHIG 680
VG+ + + + KAGR+ N P VR +AMN +HPHGGG + G
Sbjct: 311 VGVASNPNHQYRQLGKAGRSRWL-----NIRPTVRGLAMNAADHPHGGGRGKSKG 360
>UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus
Carsonella ruddii|Rep: Ribosomal protein L2 - Carsonella
ruddii
Length = 235
Score = 42.3 bits (95), Expect = 0.012
Identities = 20/36 (55%), Positives = 23/36 (63%), Gaps = 4/36 (11%)
Frame = +3
Query: 585 YKVKRNCW----PYVRXVAMNPVEHPHGGGNHQHIG 680
YK +N W P VR VAMNPV+HPHGGG + G
Sbjct: 180 YKAGQNRWKGIRPTVRGVAMNPVDHPHGGGEGKTSG 215
>UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep:
Ribosomal protein L2 - Carsonella ruddii
Length = 235
Score = 42.3 bits (95), Expect = 0.012
Identities = 20/36 (55%), Positives = 23/36 (63%), Gaps = 4/36 (11%)
Frame = +3
Query: 585 YKVKRNCW----PYVRXVAMNPVEHPHGGGNHQHIG 680
YK +N W P VR VAMNPV+HPHGGG + G
Sbjct: 180 YKAGQNRWRGIRPTVRGVAMNPVDHPHGGGEGKTSG 215
Score = 36.3 bits (80), Expect = 0.81
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +2
Query: 50 KGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYK 226
+ G + V H K K R +D+ IKG+V+ I +DP R A +A++ + D K
Sbjct: 18 RSRGKISVRHIGK-KHKKFYRKIDFKRDKSNIKGIVESIHYDPNRNARIALIKYLDGEK 75
>UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17;
Bacteria|Rep: 50S ribosomal protein L2 - Mycoplasma
pneumoniae
Length = 287
Score = 41.5 bits (93), Expect = 0.021
Identities = 20/58 (34%), Positives = 36/58 (62%)
Frame = +1
Query: 307 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSG 480
++ G MP+ +PEGT V N+E G++AR++G++A ++G + K ++L SG
Sbjct: 130 IKPGFSMPLAFIPEGTQVHNIELHPKGGGQIARSAGSYARILGQDETGKYVILQLLSG 187
Score = 36.7 bits (81), Expect = 0.61
Identities = 23/49 (46%), Positives = 26/49 (53%)
Frame = +3
Query: 516 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRXVAMNPVEHPHGGG 662
VG+V+ I KAGR H R P VR AMNP +HPHGGG
Sbjct: 200 VGVVSNLDHNLVVIGKAGRNRH-----RGIRPTVRGSAMNPNDHPHGGG 243
>UniRef50_A7CUV2 Cluster: Ribosomal protein L2; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein L2 - Opitutaceae
bacterium TAV2
Length = 288
Score = 41.1 bits (92), Expect = 0.028
Identities = 23/60 (38%), Positives = 36/60 (60%)
Frame = +3
Query: 501 KQQGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRXVAMNPVEHPHGGGNHQHIG 680
K + +G V G +++ + KAGR +++ KR P VR + MNPV+HP+GGG + G
Sbjct: 190 KCRATIGEVGNGEHMNRKLGKAGR--NRWLGKR---PRVRGMVMNPVDHPNGGGQGKSKG 244
>UniRef50_Q9G4C8 Cluster: Ribosomal protein L2; n=1;
Thraustochytrium aureum|Rep: Ribosomal protein L2 -
Thraustochytrium aureum
Length = 236
Score = 41.1 bits (92), Expect = 0.028
Identities = 22/49 (44%), Positives = 30/49 (61%)
Frame = +3
Query: 516 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRXVAMNPVEHPHGGG 662
+G V ++KAG + +++ KR P VR VAMNPV+HPHGGG
Sbjct: 168 LGQVGNESHFLSSLMKAGES--RWRNKR---PKVRGVAMNPVDHPHGGG 211
>UniRef50_Q8LWZ7 Cluster: Ribosomal protein L2; n=3;
Phaeophyceae|Rep: Ribosomal protein L2 - Laminaria
digitata
Length = 254
Score = 41.1 bits (92), Expect = 0.028
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +3
Query: 609 PYVRXVAMNPVEHPHGGGNHQHIGKASTV 695
P VR VAMNP++HPHGGG + G S+V
Sbjct: 201 PTVRGVAMNPIDHPHGGGEGKTSGGRSSV 229
>UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2;
Streptophytina|Rep: Ribosomal protein L2 - Chara
vulgaris (Common stonewort)
Length = 262
Score = 41.1 bits (92), Expect = 0.028
Identities = 24/60 (40%), Positives = 35/60 (58%)
Frame = +3
Query: 516 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRXVAMNPVEHPHGGGNHQHIGKASTV 695
+GIV+ + KAG++ ++ +R P VR VAMNPV+HPHGGG + G +V
Sbjct: 188 IGIVSNENHGKRNFRKAGQS--RWLGRR---PVVRGVAMNPVDHPHGGGEGRTKGGRRSV 242
Score = 40.7 bits (91), Expect = 0.037
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = +1
Query: 313 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 492
+GN + + +P GT++ N+E G + RA+G FA +I R++LPSGA
Sbjct: 122 LGNCVQLAYIPVGTLIHNIEWNPGQGAKFVRAAGTFAQLI--QKHEATVRLRLPSGALAS 179
Query: 493 LPSSNKA 513
+ S +A
Sbjct: 180 INSQCRA 186
>UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10;
Magnoliophyta|Rep: 50S ribosomal protein L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 144
Score = 39.9 bits (89), Expect = 0.065
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 340 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNKA 513
MP GT + N+E +G G+LARA+G A +I + K +KLPSG +++ + A
Sbjct: 3 MPLGTAIHNIEITLGRGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSA 58
Score = 38.7 bits (86), Expect = 0.15
Identities = 16/24 (66%), Positives = 17/24 (70%), Gaps = 4/24 (16%)
Frame = +3
Query: 603 CW----PYVRXVAMNPVEHPHGGG 662
CW P VR V MNPV+HPHGGG
Sbjct: 80 CWLGKRPVVRGVVMNPVDHPHGGG 103
>UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;
n=1; Acanthamoeba castellanii|Rep: Mitochondrial 60S
ribosomal protein L2 - Acanthamoeba castellanii (Amoeba)
Length = 253
Score = 39.9 bits (89), Expect = 0.065
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +3
Query: 609 PYVRXVAMNPVEHPHGGGNHQHIGKASTV 695
P VR VAMNPV+HPHGGG + G +V
Sbjct: 199 PVVRGVAMNPVDHPHGGGQGKTSGGRPSV 227
>UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellular
organisms|Rep: 50S ribosomal protein L2 - Methylococcus
capsulatus
Length = 281
Score = 39.5 bits (88), Expect = 0.086
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = +3
Query: 597 RNCWPYVRXVAMNPVEHPHGGGNHQHIG 680
R P VR VAMNPV+HPHGGG + G
Sbjct: 220 RGVRPTVRGVAMNPVDHPHGGGEGRTSG 247
Score = 38.7 bits (86), Expect = 0.15
Identities = 19/71 (26%), Positives = 36/71 (50%)
Frame = +1
Query: 256 PEAYYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIG 435
P G + G+ A ++VGN +P+ +P GT+V +E K G + AR++G ++
Sbjct: 113 PAGLSAGSEIVAGEFAAIKVGNSLPLRNIPVGTVVHCVEGKPGKGAQYARSAGTSIQLVA 172
Query: 436 HNPDAKRTRVK 468
+ R++
Sbjct: 173 KEGEYATLRMR 183
>UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_288, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 315
Score = 39.1 bits (87), Expect = 0.11
Identities = 23/82 (28%), Positives = 40/82 (48%)
Frame = -3
Query: 513 CLVA*WQNLLGSRR*LYSCTLSIRIVSNHSGEVSRGTCQTTSITHFLFKIAHNGTLRHSS 334
C + W NLL R L IR+V++ + ++ + TSIT+ +F + GT +
Sbjct: 70 CSASTWNNLLSPRWELDPAGAIIRVVADDNSSLAGCPGEDTSITNVIFNVTDLGTFGSRA 129
Query: 333 NRHHISNFKSCFLSTINKLACV 268
++ + FL+ N+LA V
Sbjct: 130 QGQNVIGNEGGFLTAANELARV 151
>UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr12 scaffold_36, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 166
Score = 39.1 bits (87), Expect = 0.11
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = -3
Query: 393 TSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVVGFGTMKSSFLVL 229
T +TH + +AHNGTL S R +I+N + L+ +++L V + FL+L
Sbjct: 19 TMVTHMVLNVAHNGTLGDGSKRQNIANNEIGLLAIVDELVGVHALDGDEQLFLML 73
>UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondrial;
n=2; Saccharomycetales|Rep: 60S ribosomal protein RML2,
mitochondrial - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 376
Score = 39.1 bits (87), Expect = 0.11
Identities = 18/63 (28%), Positives = 36/63 (57%)
Frame = +1
Query: 307 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 486
L+ GN +P+ +P G+I+ + R +L RA+G F ++G + + + +KL SG +
Sbjct: 220 LQRGNCLPLRMIPVGSIIHCIGLNSQRRSQLVRAAGTFGKILGKDQERQLAIIKLCSGEQ 279
Query: 487 KVL 495
+ +
Sbjct: 280 RYI 282
Score = 34.7 bits (76), Expect = 2.5
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +3
Query: 561 KAGRAYHKYKVKRNCWPYVRXVAMNPVEHPHGGG 662
KAGR +Y KR P VR +AMN +HPHGGG
Sbjct: 305 KAGR--RRYLGKR---PVVRGMAMNAKDHPHGGG 333
>UniRef50_A7NTF6 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 148
Score = 38.7 bits (86), Expect = 0.15
Identities = 16/24 (66%), Positives = 17/24 (70%), Gaps = 4/24 (16%)
Frame = +3
Query: 603 CW----PYVRXVAMNPVEHPHGGG 662
CW P VR V MNPV+HPHGGG
Sbjct: 84 CWLGKRPVVRGVVMNPVDHPHGGG 107
>UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3;
Dictyosteliida|Rep: Ribosomal protein L2 - Dictyostelium
citrinum
Length = 266
Score = 38.7 bits (86), Expect = 0.15
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3
Query: 543 IDKPILKAGRAYHKYKVKRNCWPYVRXVAMNPVEHPHGG 659
I+K I K+ +A K + P VR +AMNPV+HPHGG
Sbjct: 181 IEKKIKKSKKASESRK--KGIRPIVRGLAMNPVDHPHGG 217
Score = 33.9 bits (74), Expect = 4.3
Identities = 21/77 (27%), Positives = 42/77 (54%)
Frame = +1
Query: 295 KKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 474
K+ L+VG + +PEG ++ N+E +L+RA+G + +I + K + VKL
Sbjct: 102 KQGILQVGYTTKIKNIPEGILINNIELMENSGSKLSRAAGTSSLII-KQYNKKYSLVKLS 160
Query: 475 SGAKKVLPSSNKAWSVL 525
S +++ SN+ ++ +
Sbjct: 161 SKECRLI--SNECYATI 175
>UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 382
Score = 38.7 bits (86), Expect = 0.15
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +1
Query: 316 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 495
GN +P+ +P GT+V N+ +M R++G +AT+I + + K+ +G V+
Sbjct: 154 GNCLPMHMIPVGTVVYNVGSRMDGGAVFCRSAGTYATIISKEEETRDDGTKVMTGKHVVV 213
>UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02322 protein - Schistosoma
japonicum (Blood fluke)
Length = 393
Score = 37.9 bits (84), Expect = 0.26
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1
Query: 316 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 432
G+ PVGA+P GT++ E K G R +G+ ATV+
Sbjct: 186 GDAYPVGALPVGTVISQFEIKPGQGALFCRTAGSSATVV 224
>UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2;
Filobasidiella neoformans|Rep: Ribosomal protein L2,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 481
Score = 37.9 bits (84), Expect = 0.26
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +1
Query: 295 KKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGH 438
+ TL+ GNV+P+ +P G V N+ + R +L R++G F V+ H
Sbjct: 290 RTVTLKPGNVLPLYLIPPGMQVHNISLTVDGRMQLCRSAGTFGQVVSH 337
Score = 34.7 bits (76), Expect = 2.5
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Frame = +3
Query: 588 KVKRNCW----PYVRXVAMNPVEHPHGGGNHQHIG 680
K RN W P+VR AMN V+H HGGG + G
Sbjct: 405 KAGRNRWLGRRPHVRGAAMNSVDHAHGGGRGKSKG 439
>UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-PA -
Drosophila pseudoobscura (Fruit fly)
Length = 297
Score = 37.5 bits (83), Expect = 0.35
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +1
Query: 316 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 477
G+ P+GA+P GT + LE+ G + L A+G F T++ D + V+LPS
Sbjct: 164 GDAYPLGALPVGTRIHCLEKNPGQQCHLIHAAGTFGTILRKFDD--KVVVQLPS 215
>UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma
gondii|Rep: Ribosomal protein L2 - Toxoplasma gondii
Length = 267
Score = 37.1 bits (82), Expect = 0.46
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = +1
Query: 274 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 453
G + G KA L++GN +P+ + G+ + N+E + +G L + + N +I D
Sbjct: 104 GSQINFGFKAPLKIGNALPLYKILLGSFIYNIEIRYKGKGSLVK-NANHNAIILMIGDIY 162
Query: 454 RTRVKLPSGAKKVL 495
T VKLPSG K+L
Sbjct: 163 VT-VKLPSGEIKLL 175
Score = 35.5 bits (78), Expect = 1.4
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +3
Query: 525 VAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRXVAMNPVEHPHGGGNHQHIGKAS 689
+ G I + + K + + + K + P +R AMN V+HPHGGG GKAS
Sbjct: 182 ILGQLEIRRKVNKNIKKHAGFNRKLSIRPKIRGAAMNAVDHPHGGGE----GKAS 232
>UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria
tenella|Rep: Ribosomal protein L2 - Eimeria tenella
Length = 273
Score = 37.1 bits (82), Expect = 0.46
Identities = 25/91 (27%), Positives = 46/91 (50%)
Frame = +1
Query: 274 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 453
G +Y G+ L++GN++P+ +P G+ + N+E + S A +I K
Sbjct: 109 GDIIYIGETIELKIGNILPIKKIPCGSWIHNIEHNPTKGAVFVKNSKISAFLI--YIGKK 166
Query: 454 RTRVKLPSGAKKVLPSSNKAWSVLLLEVDVL 546
+KLPSG ++L NK +L E++++
Sbjct: 167 YVTIKLPSGEIRLL---NKNVFCILGELNII 194
Score = 35.9 bits (79), Expect = 1.1
Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = +3
Query: 609 PYVRXVAMNPVEHPHGGGNHQH-IGKAS 689
P VR VAMN +HPHGGG ++ IG++S
Sbjct: 213 PKVRGVAMNACDHPHGGGEGKNSIGRSS 240
>UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas
danica|Rep: Ribosomal protein L2 - Ochromonas danica
Length = 261
Score = 36.7 bits (81), Expect = 0.61
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 609 PYVRXVAMNPVEHPHGG 659
P VR VAMNPV+HPHGG
Sbjct: 220 PIVRGVAMNPVDHPHGG 236
Score = 35.1 bits (77), Expect = 1.9
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +1
Query: 340 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSG 480
+P GTI+ N+ + + +++GNFA +I D + ++KLPSG
Sbjct: 137 IPTGTIINNIGNINSKKSKYVKSAGNFAELI--QKDTENAKLKLPSG 181
>UniRef50_A7AXH0 Cluster: Rpl2; n=1; Babesia bovis|Rep: Rpl2 -
Babesia bovis
Length = 242
Score = 36.7 bits (81), Expect = 0.61
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +3
Query: 585 YKVKRNCWPYVRXVAMNPVEHPHGGG 662
YK+K P VR AMN +HPHGGG
Sbjct: 188 YKIKLGRRPKVRGTAMNACDHPHGGG 213
>UniRef50_Q9MG94 Cluster: Ribosomal protein L2; n=2; Chrysodidymus
synuroideus|Rep: Ribosomal protein L2 - Chrysodidymus
synuroideus
Length = 262
Score = 35.9 bits (79), Expect = 1.1
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 609 PYVRXVAMNPVEHPHGG 659
P VR +AMNPV+HPHGG
Sbjct: 220 PSVRGIAMNPVDHPHGG 236
>UniRef50_Q4UCG9 Cluster: 50S ribosomal protein L2, putative; n=8;
Aconoidasida|Rep: 50S ribosomal protein L2, putative -
Theileria annulata
Length = 334
Score = 35.9 bits (79), Expect = 1.1
Identities = 18/34 (52%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +3
Query: 570 RAYHKYKVKRNC-W-PYVRXVAMNPVEHPHGGGN 665
R K +RN W P VR +AMN HPHGGGN
Sbjct: 250 RILKKAGTRRNMGWRPVVRGIAMNANSHPHGGGN 283
>UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 321
Score = 35.9 bits (79), Expect = 1.1
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 316 GNVMPVGAMPEGTIVCNLEE-KMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 474
GN P+G++ GT++ ++E D +A+G AT++ H D T VKLP
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLP 211
>UniRef50_A4Q378 Cluster: Translation protein SH3-like; n=1;
Medicago truncatula|Rep: Translation protein SH3-like -
Medicago truncatula (Barrel medic)
Length = 52
Score = 35.5 bits (78), Expect = 1.4
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = +3
Query: 615 VRXVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGL 731
VR V MNPV+HPHGGG G+A K+ +GL
Sbjct: 11 VRGVVMNPVDHPHGGGE----GRAPIDKKKKKTLNSLGL 45
>UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE45450p
- Drosophila melanogaster (Fruit fly)
Length = 294
Score = 35.1 bits (77), Expect = 1.9
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +1
Query: 316 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 477
G+ P+GA+P GT + LE+ G L A+G F T++ ++ V+LPS
Sbjct: 161 GDAYPLGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTIL--RKFDEKVVVQLPS 212
>UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2;
Salinispora|Rep: DEAD/DEAH box helicase-like -
Salinispora arenicola CNS205
Length = 633
Score = 34.7 bits (76), Expect = 2.5
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +1
Query: 256 PEAYYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASG 414
PE Y+T +Y + EV +P GA + +EE +G R R + G
Sbjct: 481 PETYHTSPHLYADLDISPEVTGTLPTGARTRAGLSAEVEEDLGGRARRGDSRG 533
>UniRef50_Q4P5V2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 467
Score = 34.7 bits (76), Expect = 2.5
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +3
Query: 516 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRXVAMNPVEHPHGGG 662
+G V+ + + KAGR+ ++ +R P VR VAMN +HPHGGG
Sbjct: 374 IGTVSNKDHQHRRLGKAGRS--RWLGRR---PKVRGVAMNACDHPHGGG 417
>UniRef50_O60035 Cluster: Protein PDC2; n=4; Candida albicans|Rep:
Protein PDC2 - Candida albicans (Yeast)
Length = 836
Score = 34.7 bits (76), Expect = 2.5
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = -2
Query: 286 KQIGLCSRLRDNEELLPCLELVWIAEVYNSQRCTSTRVMDYILNNSLDV----SMTFSVI 119
++IG+C + N E+ +W + YNS+R S + ILN+ D+ F +I
Sbjct: 7 QKIGICLKAEANPEMTQSDLALWAMKEYNSERPPSQTTISRILNSKNDIISRKESEFELI 66
Query: 118 *RAKFRSAFPLLR 80
R K A PLLR
Sbjct: 67 RRRK--RANPLLR 77
>UniRef50_Q951B6 Cluster: Ribosomal protein L2; n=5;
Tetrahymena|Rep: Ribosomal protein L2 - Tetrahymena
thermophila
Length = 262
Score = 34.3 bits (75), Expect = 3.3
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +3
Query: 615 VRXVAMNPVEHPHGG 659
VR VAMNPV+HPHGG
Sbjct: 228 VRGVAMNPVDHPHGG 242
>UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2).; n=2;
Deuterostomia|Rep: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2). - Takifugu
rubripes
Length = 255
Score = 33.9 bits (74), Expect = 4.3
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 316 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 432
G+ P+GA+P GT+V NLE + G RA+G ++
Sbjct: 130 GDAYPLGALPVGTLVNNLEIQPGKGSEYIRAAGTSGVLL 168
>UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome
shotgun sequence; n=2; Eumetazoa|Rep: Chromosome 17
SCAF14762, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 259
Score = 33.9 bits (74), Expect = 4.3
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 316 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 432
G+ P+GA+P GT+V NLE + G RA+G ++
Sbjct: 164 GDAYPLGALPVGTLVNNLEIQPGKGSEYIRAAGTSGVLL 202
>UniRef50_A3UWP9 Cluster: Putative uncharacterized protein; n=3;
Vibrionales|Rep: Putative uncharacterized protein -
Vibrio splendidus 12B01
Length = 7629
Score = 33.9 bits (74), Expect = 4.3
Identities = 19/64 (29%), Positives = 32/64 (50%)
Frame = -1
Query: 656 TVRMLYRVHGNTTYIWPAVTFDLVLVVCPSSFQNRFVNTSTSSNNTDHALLLDGRTFLAP 477
TVR + NT Y+ +FD+ LV+ P + Q FVN + + D ++ +D +
Sbjct: 6662 TVRSVDTDADNTEYLGTPTSFDVDLVIDPINDQPIFVNVTNIETSEDISVAIDNFSIYDV 6721
Query: 476 DGSF 465
D +F
Sbjct: 6722 DANF 6725
>UniRef50_Q6Z3M9 Cluster: Putative uncharacterized protein
OSJNBa0087F21.12; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OSJNBa0087F21.12 - Oryza sativa subsp. japonica (Rice)
Length = 159
Score = 33.9 bits (74), Expect = 4.3
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = -2
Query: 559 KIGLSIRPPPATIPTMPCCLMAEPSWLQTVALLLYA*HQDCVQSQWRSFQRHVPDDLYHP 380
++ L++ P T+PT C A PSW+ T A++ + S R Q H+ DL+ P
Sbjct: 15 ELALAMARLPTTMPTSICGFAASPSWIHTDAIV-----DGIISSSIRCAQLHLDLDLHCP 69
>UniRef50_A3JMF2 Cluster: Glycosyl transferase, family 2; n=1;
Rhodobacterales bacterium HTCC2150|Rep: Glycosyl
transferase, family 2 - Rhodobacterales bacterium
HTCC2150
Length = 407
Score = 33.5 bits (73), Expect = 5.7
Identities = 22/59 (37%), Positives = 34/59 (57%)
Frame = +1
Query: 337 AMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNKA 513
A+PE T +CNL E D+G +A A+G V G N + + R +L +G + LP + K+
Sbjct: 88 AVPEPTWLCNLSEAFKDQG-VAAATG---FVRGRNGISFQWRGRLVNGQSQTLPITTKS 142
>UniRef50_P15765 Cluster: Mitochondrial 60S ribosomal protein L2;
n=1; Paramecium tetraurelia|Rep: Mitochondrial 60S
ribosomal protein L2 - Paramecium tetraurelia
Length = 259
Score = 33.5 bits (73), Expect = 5.7
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 609 PYVRXVAMNPVEHPHGG 659
P VR VAMNPV+HP+GG
Sbjct: 229 PRVRGVAMNPVDHPNGG 245
>UniRef50_Q9W349 Cluster: Protein lozenge; n=13; Eumetazoa|Rep:
Protein lozenge - Drosophila melanogaster (Fruit fly)
Length = 826
Score = 33.5 bits (73), Expect = 5.7
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +3
Query: 525 VAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRXVAMNPVEHPHGGGNHQH 674
VAG GR+ + I +G ++H + + + PY +P HPH +H H
Sbjct: 90 VAGPGRLGRSINGSGGSHHHHHLHHHYSPYHHAHPYHP-PHPHAPHHHHH 138
>UniRef50_A6NSE2 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 348
Score = 33.1 bits (72), Expect = 7.5
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 361 CNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 495
C+L+E+M +RG L R+ N+ G PD R V+LP ++++
Sbjct: 297 CDLKERMAERGILLRSCANYD---GLGPDYYRAAVRLPEENERLI 338
>UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial
precursor; n=24; Euteleostomi|Rep: 39S ribosomal protein
L2, mitochondrial precursor - Homo sapiens (Human)
Length = 305
Score = 33.1 bits (72), Expect = 7.5
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +1
Query: 316 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 432
G+ P+GA+P GT++ N+E + G + RA+G ++
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 217
>UniRef50_Q5DUX7 Cluster: Hydrogenosomal 60S ribosomal protein L2;
n=1; Nyctotherus ovalis|Rep: Hydrogenosomal 60S
ribosomal protein L2 - Nyctotherus ovalis
Length = 290
Score = 33.1 bits (72), Expect = 7.5
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 585 YKVKRNCWPYVRXVAMNPVEHPHGG 659
Y V R P VR + NPV+HP+GG
Sbjct: 249 YWVNRGIKPQVRGIVKNPVDHPNGG 273
>UniRef50_A2SS53 Cluster: Formate dehydrogenase family accessory
protein FdhD; n=1; Methanocorpusculum labreanum Z|Rep:
Formate dehydrogenase family accessory protein FdhD -
Methanocorpusculum labreanum (strain ATCC 43576 / DSM
4855 / Z)
Length = 506
Score = 32.7 bits (71), Expect = 9.9
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Frame = +1
Query: 232 DKEGALHCPEAYYTGQFVYCGK-----KATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGR 396
DK GALHC YY G+ VY A +V M + +P G V +M G
Sbjct: 388 DKTGALHCAVLYYQGEVVYSANDIGRHNAVDKVIGYMTLHRLPAGKCVLGCTGRM-PHGM 446
Query: 397 LARASGNFATVI 432
+++A+ VI
Sbjct: 447 VSKAANAGIPVI 458
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 792,565,204
Number of Sequences: 1657284
Number of extensions: 17430231
Number of successful extensions: 50594
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 48329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50584
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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