Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40530
(669 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 68 1e-12
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 62 9e-11
SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein Klp6|S... 50 2e-07
SPBC2F12.13 |klp5|sot1|kinesin-like protein Klp5|Schizosaccharom... 46 5e-06
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 43 5e-05
SPAC1834.07 |klp3|krp1|kinesin-like protein Klp3|Schizosaccharom... 43 5e-05
SPBC1604.20c |tea2|klp4|kinesin-like protein Tea2|Schizosaccharo... 37 0.003
SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces ... 36 0.007
SPAC343.20 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 1.8
SPBC28E12.02 ||SPBC9B6.13|RNA-binding protein|Schizosaccharomyce... 26 5.6
SPAC19D5.06c |din1||Dhp1p-interacting protein Din1|Schizosacchar... 25 7.5
SPBC776.05 |||membrane transporter |Schizosaccharomyces pombe|ch... 25 9.9
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 68.1 bits (159), Expect = 1e-12
Identities = 35/54 (64%), Positives = 41/54 (75%)
Frame = +3
Query: 3 NSKLTHLLMPSLGGNSKTLMLVNINQFDECFSETLNSLRFATKVNNCRVVKAKK 164
NSKLT+LL SLGGNSKTLM VNI+ + ETL SLRFATKVNN ++ A+K
Sbjct: 761 NSKLTNLLQYSLGGNSKTLMFVNISPLKQHVPETLCSLRFATKVNNTQIGTARK 814
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 61.7 bits (143), Expect = 9e-11
Identities = 31/53 (58%), Positives = 38/53 (71%)
Frame = +3
Query: 3 NSKLTHLLMPSLGGNSKTLMLVNINQFDECFSETLNSLRFATKVNNCRVVKAK 161
NSKLT+LL SLG +KTLM VN++ F +TLNSLRFATKVN+ +V K
Sbjct: 776 NSKLTYLLKYSLGKGAKTLMFVNVSPLKSQFMDTLNSLRFATKVNDTKVGSIK 828
>SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein
Klp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 50.4 bits (115), Expect = 2e-07
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 2/106 (1%)
Frame = +3
Query: 3 NSKLTHLLMPSLGGNSKTLMLVNINQFDECFSETLNSLRFATKVNNCRVVKAKKNLCMVD 182
+SKLT LL SLGGN +T M+V I+ E + ET N+L++ + N + K +N+ VD
Sbjct: 343 DSKLTRLLKFSLGGNCRTCMIVCISPSSEHYDETHNTLKYGNRAKNIK-TKVSRNVVSVD 401
Query: 183 T*LLFY*YY*SVFEFH--CDFFETRLVKQVALIVLNKCILTSSSNK 314
+ Y +++E + R+ ++ + LNK + SS +
Sbjct: 402 RHVSE--YVRTIYELRQKVSILQKRIAEESKQLALNKEVRKISSRE 445
>SPBC2F12.13 |klp5|sot1|kinesin-like protein
Klp5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 883
Score = 46.0 bits (104), Expect = 5e-06
Identities = 23/60 (38%), Positives = 38/60 (63%)
Frame = +3
Query: 3 NSKLTHLLMPSLGGNSKTLMLVNINQFDECFSETLNSLRFATKVNNCRVVKAKKNLCMVD 182
+SKLT LL SLGGN +T+M+V ++ + ET N+L++A + N + + +N+ VD
Sbjct: 344 DSKLTRLLKFSLGGNCRTVMIVCVSPSSVHYEETHNTLKYANRAKNIK-TEVLRNMISVD 402
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 42.7 bits (96), Expect = 5e-05
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +3
Query: 6 SKLTHLLMPSLGGNSKTLMLVNINQFDECFSETLNSLRFATKVNNCR 146
SKLT LL SLGG +KT M+V ++ + ET+++L +A + + R
Sbjct: 376 SKLTRLLQDSLGGKTKTSMIVTVSSTNTNLEETISTLEYAARAKSIR 422
>SPAC1834.07 |klp3|krp1|kinesin-like protein
Klp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 554
Score = 42.7 bits (96), Expect = 5e-05
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Frame = +3
Query: 3 NSKLTHLLMPSLGGNSKTLMLVNINQFDECFSETLNSLRF---ATKVNNCRVVKAK 161
+SKLT +L SLGGNS+T +++N + +ETL++LRF A + N VV ++
Sbjct: 279 DSKLTRILKESLGGNSRTTLIINCSPDSYNATETLSTLRFGHRAKSIKNKAVVNSE 334
>SPBC1604.20c |tea2|klp4|kinesin-like protein
Tea2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 36.7 bits (81), Expect = 0.003
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = +3
Query: 6 SKLTHLLMPSLGGNSKTLMLVNINQFDECFSETLNSLRFATKVNN 140
SKLT LL SL G S+ +L I+ ET N+L+FA++ N
Sbjct: 415 SKLTRLLQQSLSGQSQISLLATISIESNHTMETTNTLKFASRAQN 459
>SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 511
Score = 35.5 bits (78), Expect = 0.007
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Frame = +3
Query: 3 NSKLTHLLMPSLGGNSKTLMLVNINQFDECFSETLNSLRF---ATKVNNCRVVKAKK 164
+S LT LL +LGGN +T+ML ++ D F +T ++LR+ A ++ N + K+
Sbjct: 312 DSVLTTLLQDALGGNCRTIMLTCVSPCD--FDDTFSALRYSEAARRIKNISNINCKE 366
>SPAC343.20 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 113
Score = 27.5 bits (58), Expect = 1.8
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 445 TKIVKFSRFSSYFLFYTTKVYILKKLFICHNQIIIPQA 558
T KFS+F Y+L T +L KL CH + Q+
Sbjct: 58 TNFTKFSKFV-YYLAITLHTSLLTKLIYCHADLYALQS 94
>SPBC28E12.02 ||SPBC9B6.13|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 663
Score = 25.8 bits (54), Expect = 5.6
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +3
Query: 213 SVFEFHCDFFETRLVKQVALIVLNKCILT 299
S++ CD++E+ + Q+ + KCI T
Sbjct: 22 SLYASKCDYYESDIYSQIRRLTEEKCIET 50
>SPAC19D5.06c |din1||Dhp1p-interacting protein
Din1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 352
Score = 25.4 bits (53), Expect = 7.5
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -2
Query: 467 RENLTILVNLQYIILVKLTFKKSKIIC*GSMN 372
R+N ++ + QY +VK+ KSK+I G ++
Sbjct: 170 RDNQDVVPDEQYCSIVKINIGKSKLILAGEVD 201
>SPBC776.05 |||membrane transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 25.0 bits (52), Expect = 9.9
Identities = 7/33 (21%), Positives = 18/33 (54%)
Frame = -2
Query: 635 LIYFVWRLKNSLQFFLISFRV*FSEKA*GIIIW 537
L+ ++W S + F++S+ + + A ++ W
Sbjct: 175 LLVYIWIFPESRRLFILSYSISYGTLAWSVVAW 207
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,306,609
Number of Sequences: 5004
Number of extensions: 40618
Number of successful extensions: 87
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 87
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 305854096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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