Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40526
(730 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 48 9e-08
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 23 2.2
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 23 2.9
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 23 2.9
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 22 6.8
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 22 6.8
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 22 6.8
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 48.0 bits (109), Expect = 9e-08
Identities = 46/149 (30%), Positives = 64/149 (42%), Gaps = 2/149 (1%)
Frame = +2
Query: 5 NQLSYLFPSAFKIHPRLREIKLANNKFNFFPSELISTLQYLELVDLSGNALKKCR*--A* 178
N L L F LREI LA N P + + L+ L +++L+GN L R
Sbjct: 271 NSLDSLPEGLFASTRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAGNRLGSDRVDETT 330
Query: 179 FCSPSKTEDNFTSKK*IGNS*RNGFHNSSQIQRLDLSQNKIDRLGDRLFEGLIRLETLNL 358
F + S + + F + +Q LDL N IDR+ F L L TL L
Sbjct: 331 FLGLIRLIVLNLSYNMLTHIDARMFKDLFFLQILDLRNNSIDRIESNAFLPLYNLHTLEL 390
Query: 359 AGNMLAELPDSIFERNRLHMLENINLSGN 445
+ N L + +F N L +L + LSGN
Sbjct: 391 SDNKLRTVGAQLF--NGLFVLNRLTLSGN 417
Score = 46.8 bits (106), Expect = 2e-07
Identities = 41/150 (27%), Positives = 70/150 (46%)
Frame = +2
Query: 5 NQLSYLFPSAFKIHPRLREIKLANNKFNFFPSELISTLQYLELVDLSGNALKKCR*A*FC 184
N ++ + P AF+ L+E+ L+ N+ P L L L+ +DL N + F
Sbjct: 417 NAIASIDPLAFRNCSDLKELDLSGNELTSVPDAL-RDLALLKTLDLGENRISNFYNGSFR 475
Query: 185 SPSKTEDNFTSKK*IGNS*RNGFHNSSQIQRLDLSQNKIDRLGDRLFEGLIRLETLNLAG 364
+ + IGN R + +Q L+L++NK+ + FE +RLE + L G
Sbjct: 476 NLDQLTGLRLIGNDIGNLSRGMLWDLPNLQILNLARNKVQHVERYAFERNMRLEAIRLDG 535
Query: 365 NMLAELPDSIFERNRLHMLENINLSGNLFE 454
N L+++ + +F + L +NLS N E
Sbjct: 536 NFLSDI-NGVF--TSIASLLLLNLSENHIE 562
Score = 42.7 bits (96), Expect = 3e-06
Identities = 26/67 (38%), Positives = 38/67 (56%)
Frame = +2
Query: 245 NGFHNSSQIQRLDLSQNKIDRLGDRLFEGLIRLETLNLAGNMLAELPDSIFERNRLHMLE 424
N F + L+LS NK+ +G +LF GL L L L+GN +A + D + RN L+
Sbjct: 377 NAFLPLYNLHTLELSDNKLRTVGAQLFNGLFVLNRLTLSGNAIASI-DPLAFRN-CSDLK 434
Query: 425 NINLSGN 445
++LSGN
Sbjct: 435 ELDLSGN 441
Score = 41.1 bits (92), Expect = 1e-05
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 2/162 (1%)
Frame = +2
Query: 2 DNQLSYLFPSAFKIHPRLREIKLANNKFNFFPSELISTLQYLELVDLSGNALKKCR*A*F 181
+N + + +AF L ++L++NK ++L + L L + LSGNA+ F
Sbjct: 368 NNSIDRIESNAFLPLYNLHTLELSDNKLRTVGAQLFNGLFVLNRLTLSGNAIASIDPLAF 427
Query: 182 --CSPSKTEDNFTSKK*IGNS*RNGFHNSSQIQRLDLSQNKIDRLGDRLFEGLIRLETLN 355
CS K D ++ S + + + ++ LDL +N+I + F L +L L
Sbjct: 428 RNCSDLKELDLSGNEL---TSVPDALRDLALLKTLDLGENRISNFYNGSFRNLDQLTGLR 484
Query: 356 LAGNMLAELPDSIFERNRLHMLENINLSGNLFEHPPLKALQK 481
L GN + L + L L+ +NL+ N +H A ++
Sbjct: 485 LIGNDIGNLSRGMLW--DLPNLQILNLARNKVQHVERYAFER 524
Score = 39.9 bits (89), Expect = 2e-05
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 2/134 (1%)
Frame = +2
Query: 50 RLREIKLANNKFNFFPSELISTLQYLELVDLSGNALKKCR*A*FCSPSKTEDNFTSKK*I 229
+L+E+ L N + ++ L L + S N+L F S + + +
Sbjct: 238 QLQELHLQRNAIVEIAGDALTGLTVLRTFNASYNSLDSLPEGLFASTRDLREIHLAYNGL 297
Query: 230 GNS*RNGFHNSSQIQRLDLSQNKI--DRLGDRLFEGLIRLETLNLAGNMLAELPDSIFER 403
+ + F Q+ L+L+ N++ DR+ + F GLIRL LNL+ NML + +F+
Sbjct: 298 RDLPKGIFTRLEQLLVLNLAGNRLGSDRVDETTFLGLIRLIVLNLSYNMLTHIDARMFK- 356
Query: 404 NRLHMLENINLSGN 445
L L+ ++L N
Sbjct: 357 -DLFFLQILDLRNN 369
Score = 37.5 bits (83), Expect = 1e-04
Identities = 31/132 (23%), Positives = 57/132 (43%)
Frame = +2
Query: 50 RLREIKLANNKFNFFPSELISTLQYLELVDLSGNALKKCR*A*FCSPSKTEDNFTSKK*I 229
RL + L+ N + + L +L+++DL N++ + F S +
Sbjct: 336 RLIVLNLSYNMLTHIDARMFKDLFFLQILDLRNNSIDRIESNAFLPLYNLHTLELSDNKL 395
Query: 230 GNS*RNGFHNSSQIQRLDLSQNKIDRLGDRLFEGLIRLETLNLAGNMLAELPDSIFERNR 409
F+ + RL LS N I + F L+ L+L+GN L +PD++ +
Sbjct: 396 RTVGAQLFNGLFVLNRLTLSGNAIASIDPLAFRNCSDLKELDLSGNELTSVPDALRD--- 452
Query: 410 LHMLENINLSGN 445
L +L+ ++L N
Sbjct: 453 LALLKTLDLGEN 464
Score = 31.9 bits (69), Expect = 0.006
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +2
Query: 2 DNQLSYLFPSAFKIHPRLREIKLANNKFNFFPSELISTLQYLELVDLSGNAL 157
DN++ L F+ LRE+ L NN F + L+ LE++ LSGN L
Sbjct: 851 DNRIRELKGFEFERLSHLRELYLQNNLIGFIGNLTFLPLRSLEILRLSGNRL 902
Score = 31.5 bits (68), Expect = 0.008
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = +2
Query: 251 FHNSSQIQRLDLSQNKIDRLGDRLFEGLIRLETLNLAGNMLAELPDSIFERNRLHMLENI 430
F ++ L ++ + I+ + +R F GL L+ L+L N + EL FE RL L +
Sbjct: 814 FIGRKNMRVLYVNGSGIESIQNRTFNGLNNLQILHLEDNRIRELKG--FEFERLSHLREL 871
Query: 431 NLSGNL 448
L NL
Sbjct: 872 YLQNNL 877
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 23.4 bits (48), Expect = 2.2
Identities = 6/31 (19%), Positives = 21/31 (67%)
Frame = -3
Query: 635 VFGSLSTLSIDFCDKGLKDKSNFFMFTKTLS 543
+FG+++T ++ + ++ +N+++F+ +S
Sbjct: 55 IFGNITTCTVIIKNPAMQTATNYYLFSLAIS 85
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 23.0 bits (47), Expect = 2.9
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 395 FERNRLHMLENINLSGNLF 451
FERNRL +LE+ N +
Sbjct: 291 FERNRLQLLESFKRKVNFY 309
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 23.0 bits (47), Expect = 2.9
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 365 NMLAELPDSIFERNRLHMLENINLSGNLFEHPPLK 469
N + L D++ ERNR++ +E I + + P+K
Sbjct: 450 NAMYSLFDTLTERNRVYKVETIGDAYMVVSGAPVK 484
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.8 bits (44), Expect = 6.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 674 LWDNLRLHFCAV*ICLLIT 730
+WD+ RL F A C L+T
Sbjct: 737 IWDSSRLEFEAAQDCELVT 755
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.8 bits (44), Expect = 6.8
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -2
Query: 414 CKRFLSKILSGSSASIFPAKFK 349
C RFL++++S A + KFK
Sbjct: 813 CLRFLNEVISDFDAILDQNKFK 834
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.8 bits (44), Expect = 6.8
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +2
Query: 593 CHKNRSIVCSTNRKLFAN 646
C + VC++N K++AN
Sbjct: 110 CPRRHRPVCASNGKIYAN 127
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,165
Number of Sequences: 438
Number of extensions: 3657
Number of successful extensions: 23
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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