BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40523
(634 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ010299-1|CAA09070.1| 722|Anopheles gambiae stat protein. 27 0.65
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 25 2.6
AF117750-1|AAD38336.1| 380|Anopheles gambiae serine protease 18... 24 3.5
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 24 4.6
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 24 4.6
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 24 4.6
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 23 6.1
>AJ010299-1|CAA09070.1| 722|Anopheles gambiae stat protein.
Length = 722
Score = 26.6 bits (56), Expect = 0.65
Identities = 16/74 (21%), Positives = 38/74 (51%)
Frame = +3
Query: 183 DRILFCDKFCNDSLYDTTQHILEYIFFSGFDEKNYLKILWVIISHFFVSFLSLLNSRELY 362
D+++ +FC D+ + E+++ + +++L++LWV ++ + F+ ++ E Y
Sbjct: 506 DQMISFAQFCKDTTPECNYTFWEWLYAALKIIRDHLQVLWV--NNTIIGFIH-KSTAEKY 562
Query: 363 AASILPSYIGLMIT 404
A +P L T
Sbjct: 563 LAKCVPGTFLLRFT 576
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
cytoskeletal structural protein protein.
Length = 1645
Score = 24.6 bits (51), Expect = 2.6
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 560 WCALH***CVK*NTVCNLNSLIYG 631
WC+ H C+ VCNLN LI G
Sbjct: 645 WCSFHG--CM--GAVCNLNELIQG 664
>AF117750-1|AAD38336.1| 380|Anopheles gambiae serine protease 18D
protein.
Length = 380
Score = 24.2 bits (50), Expect = 3.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 163 CQGQSSQLIH*LVQMLHSLFRILGQT 86
CQG S + VQ H +F ILG T
Sbjct: 325 CQGDSGGPLQVTVQENHCMFYILGVT 350
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 23.8 bits (49), Expect = 4.6
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = +1
Query: 169 GLSGGTEYFFVTSSAMTLCMILLNTFW 249
G+ G T +V A+T C FW
Sbjct: 1793 GVGGSTSVLWVPDHAVTRCTTCQTVFW 1819
>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1978
Score = 23.8 bits (49), Expect = 4.6
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = +1
Query: 169 GLSGGTEYFFVTSSAMTLCMILLNTFW 249
G+ G T +V A+T C FW
Sbjct: 1794 GVGGSTSVLWVPDHAVTRCTTCQTVFW 1820
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 23.8 bits (49), Expect = 4.6
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1
Query: 403 LHIMRFAVPEDLVKLLYK 456
LH MR P+DLVK L K
Sbjct: 242 LHEMRVDTPDDLVKALDK 259
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 23.4 bits (48), Expect = 6.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 179 PLRPNVPGPIESANTLTSANAPLIVPNP 96
P + N+ E++ TSA A IVPNP
Sbjct: 913 PKKQNLKFIDEASTPSTSAMAATIVPNP 940
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 679,427
Number of Sequences: 2352
Number of extensions: 15989
Number of successful extensions: 31
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61886940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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