Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40523
         (634 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051658-1|AAK93082.1|  238|Drosophila melanogaster LD12037p pro...   113   2e-25
AF508786-1|AAN63815.1|  238|Drosophila melanogaster presenilin s...   113   2e-25
AE014134-464|AAF51212.1|  238|Drosophila melanogaster CG2855-PA ...   113   2e-25
BT029652-1|ABL84855.1|  336|Drosophila melanogaster IP17232p pro...    31   1.7  
AE014297-2585|AAF55598.3|  699|Drosophila melanogaster CG18208-P...    31   1.7  
BT030304-1|ABN49443.1|  422|Drosophila melanogaster IP18747p pro...    28   9.1  
AY271617-1|AAQ01746.1|  532|Drosophila melanogaster CCK-like GPC...    28   9.1  

>AY051658-1|AAK93082.1|  238|Drosophila melanogaster LD12037p
           protein.
          Length = 238

 Score =  113 bits (272), Expect = 2e-25
 Identities = 53/84 (63%), Positives = 65/84 (77%)
 Frame = +1

Query: 4   LLRKTEAGLKEISENHEIGSNKLEMAYVSGLGFGTMSGAFALVNVLADSIGPGTLGLSGG 183
           +LR TE GL  ++E+  +  NK  +AYVSGLGFG +SG FALVNVLAD  GPGT+GL GG
Sbjct: 83  ILRSTEQGLHAVAEDTRVTDNKHILAYVSGLGFGIISGMFALVNVLADMSGPGTMGLKGG 142

Query: 184 TEYFFVTSSAMTLCMILLNTFWSI 255
           TE FFVTS+A  L +ILL+TFWS+
Sbjct: 143 TELFFVTSAAQALSIILLHTFWSV 166



 Score = 72.1 bits (169), Expect = 6e-13
 Identities = 31/65 (47%), Positives = 47/65 (72%)
 Frame = +3

Query: 255 IFFSGFDEKNYLKILWVIISHFFVSFLSLLNSRELYAASILPSYIGLMITSYNAFRCAGG 434
           IFF+ FD  NY+ I +V+ SH FVS ++LLN+ ELY  ++L +Y+  ++T   AFR AGG
Sbjct: 167 IFFNAFDTNNYIHIGYVVFSHLFVSLITLLNANELYTTTLLINYLVTILTGVLAFRVAGG 226

Query: 435 SSKTF 449
           +S++F
Sbjct: 227 TSRSF 231


>AF508786-1|AAN63815.1|  238|Drosophila melanogaster presenilin
           stabilization factor protein.
          Length = 238

 Score =  113 bits (272), Expect = 2e-25
 Identities = 53/84 (63%), Positives = 65/84 (77%)
 Frame = +1

Query: 4   LLRKTEAGLKEISENHEIGSNKLEMAYVSGLGFGTMSGAFALVNVLADSIGPGTLGLSGG 183
           +LR TE GL  ++E+  +  NK  +AYVSGLGFG +SG FALVNVLAD  GPGT+GL GG
Sbjct: 83  ILRSTEQGLHAVAEDTRVTDNKHILAYVSGLGFGIISGMFALVNVLADMSGPGTMGLKGG 142

Query: 184 TEYFFVTSSAMTLCMILLNTFWSI 255
           TE FFVTS+A  L +ILL+TFWS+
Sbjct: 143 TELFFVTSAAQALSIILLHTFWSV 166



 Score = 72.1 bits (169), Expect = 6e-13
 Identities = 31/65 (47%), Positives = 47/65 (72%)
 Frame = +3

Query: 255 IFFSGFDEKNYLKILWVIISHFFVSFLSLLNSRELYAASILPSYIGLMITSYNAFRCAGG 434
           IFF+ FD  NY+ I +V+ SH FVS ++LLN+ ELY  ++L +Y+  ++T   AFR AGG
Sbjct: 167 IFFNAFDTNNYIHIGYVVFSHLFVSLITLLNANELYTTTLLINYLVTILTGVLAFRVAGG 226

Query: 435 SSKTF 449
           +S++F
Sbjct: 227 TSRSF 231


>AE014134-464|AAF51212.1|  238|Drosophila melanogaster CG2855-PA
           protein.
          Length = 238

 Score =  113 bits (272), Expect = 2e-25
 Identities = 53/84 (63%), Positives = 65/84 (77%)
 Frame = +1

Query: 4   LLRKTEAGLKEISENHEIGSNKLEMAYVSGLGFGTMSGAFALVNVLADSIGPGTLGLSGG 183
           +LR TE GL  ++E+  +  NK  +AYVSGLGFG +SG FALVNVLAD  GPGT+GL GG
Sbjct: 83  ILRSTEQGLHAVAEDTRVTDNKHILAYVSGLGFGIISGMFALVNVLADMSGPGTMGLKGG 142

Query: 184 TEYFFVTSSAMTLCMILLNTFWSI 255
           TE FFVTS+A  L +ILL+TFWS+
Sbjct: 143 TELFFVTSAAQALSIILLHTFWSV 166



 Score = 72.1 bits (169), Expect = 6e-13
 Identities = 31/65 (47%), Positives = 47/65 (72%)
 Frame = +3

Query: 255 IFFSGFDEKNYLKILWVIISHFFVSFLSLLNSRELYAASILPSYIGLMITSYNAFRCAGG 434
           IFF+ FD  NY+ I +V+ SH FVS ++LLN+ ELY  ++L +Y+  ++T   AFR AGG
Sbjct: 167 IFFNAFDTNNYIHIGYVVFSHLFVSLITLLNANELYTTTLLINYLVTILTGVLAFRVAGG 226

Query: 435 SSKTF 449
           +S++F
Sbjct: 227 TSRSF 231


>BT029652-1|ABL84855.1|  336|Drosophila melanogaster IP17232p
           protein.
          Length = 336

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
 Frame = +1

Query: 85  VSGLGFGTMSGAFALVNVLADS--IGPGTLGLSGGTEYFFVTSSAMTLCMILLNTFWSIY 258
           V+    G +   F+L N L      G     +    +    T+S M LC+I L+ +WSI 
Sbjct: 159 VADFFLGLIIMPFSLANELMGYWIFGSWWCDIHSAMDVLLCTASIMNLCLISLDRYWSIT 218

Query: 259 SLVVLMKRTT 288
             V  +K  T
Sbjct: 219 KAVDYLKSRT 228


>AE014297-2585|AAF55598.3|  699|Drosophila melanogaster CG18208-PA
           protein.
          Length = 699

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
 Frame = +1

Query: 85  VSGLGFGTMSGAFALVNVLADS--IGPGTLGLSGGTEYFFVTSSAMTLCMILLNTFWSIY 258
           V+    G +   F+L N L      G     +    +    T+S M LC+I L+ +WSI 
Sbjct: 159 VADFFLGLIIMPFSLANELMGYWIFGSWWCDIHSAMDVLLCTASIMNLCLISLDRYWSIT 218

Query: 259 SLVVLMKRTT 288
             V  +K  T
Sbjct: 219 KAVDYLKSRT 228


>BT030304-1|ABN49443.1|  422|Drosophila melanogaster IP18747p
           protein.
          Length = 422

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
 Frame = +1

Query: 7   LRKTEAGLKEISENHEIGSNK--LEMAYVSGLGFGTMSGAFALVNVLADSIGPGTLGLSG 180
           LR TEAGL+  +E   + S K  ++M +V  L F        ++N +   +GP      G
Sbjct: 282 LRITEAGLRRSNETKSLESKKRVVKMLFVLVLEFFICWTPLYVINTMTMLLGPTVYEYVG 341

Query: 181 GTEYFFV 201
            T   F+
Sbjct: 342 YTSISFL 348


>AY271617-1|AAQ01746.1|  532|Drosophila melanogaster CCK-like GPCR
           protein.
          Length = 532

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
 Frame = +1

Query: 7   LRKTEAGLKEISENHEIGSNK--LEMAYVSGLGFGTMSGAFALVNVLADSIGPGTLGLSG 180
           LR TEAGL+  +E   + S K  ++M +V  L F        ++N +   +GP      G
Sbjct: 385 LRITEAGLRRSNETKSLESKKRVVKMLFVLVLEFFICWTPLYVINTMTMLLGPTVYEYVG 444

Query: 181 GTEYFFV 201
            T   F+
Sbjct: 445 YTSISFL 451


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,824,373
Number of Sequences: 53049
Number of extensions: 646675
Number of successful extensions: 1551
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1549
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)