Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40518
         (831 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   2.8  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    24   6.5  
Z49832-1|CAA89993.1|  155|Anopheles gambiae serine proteinase pr...    23   8.6  
AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.           23   8.6  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -3

Query: 604 VIEDGAEGTRCGIQ*HAEGRRTYREVGQCKQR 509
           V+E+G E  +C +         YR   QCK R
Sbjct: 620 VLEEGIELPKCNLVIRWNSPANYRSYAQCKGR 651


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +2

Query: 272 PFKPKLITVSRQKIGRVMVPI 334
           P K +L+T+S ++ G + VP+
Sbjct: 718 PAKTELVTISSKRQGNINVPV 738


>Z49832-1|CAA89993.1|  155|Anopheles gambiae serine proteinase
           protein.
          Length = 155

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 393 SRILRHPQFVGSRK 434
           +RI++HPQ+  SRK
Sbjct: 41  ARIIKHPQYRSSRK 54


>AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.
          Length = 194

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 467 FVEGCRCCRGSFA*SNKLRMS 405
           F++ C CCR SF    +L+++
Sbjct: 136 FLKECYCCRESFLRERQLQLT 156


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 888,330
Number of Sequences: 2352
Number of extensions: 17438
Number of successful extensions: 33
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 87651612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)