Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40501
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    27   0.13 
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    27   0.13 
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    26   0.24 
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    24   1.3  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   8.9  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   8.9  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = +2

Query: 146 NFFRNKLKLMSFLRKRCNVNPARGPFHFRAP--SKILWR 256
           N+ +  ++ +SF  K CN+     P+ F  P   K LW+
Sbjct: 5   NYSKKDIRSLSFFYKICNIFGIVPPYSFEKPDSQKSLWK 43


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = +2

Query: 146 NFFRNKLKLMSFLRKRCNVNPARGPFHFRAP--SKILWR 256
           N+ +  ++ +SF  K CN+     P+ F  P   K LW+
Sbjct: 5   NYSKKDIRSLSFFYKICNIFGIVPPYSFEKPDSQKSLWK 43


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = -1

Query: 582 MVLSPSTPSHQHPW*SS*VSFHR-QLLNSLALPLVFKLTNNITVFPSNF 439
           M + P +PS    W    VSFH+ +L N+++    F + N++  +   F
Sbjct: 54  MYIHPDSPSTGEQWMQKVVSFHKLKLTNNISDKHGFTILNSMHKYQPRF 102


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -1

Query: 582 MVLSPSTPSHQHPW*SS*VSFHR-QLLNSLA 493
           M + P +PS    W    VSFH+ +L N+++
Sbjct: 54  MYIHPDSPSTGEQWMQKVVSFHKLKLTNNIS 84


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -3

Query: 55  QMTTAIDHYGLIAK 14
           Q+ +A+D YGL+A+
Sbjct: 137 QLFSAVDPYGLVAQ 150


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 589 VVNGVVAFDTFSPASLVILLSFFS 518
           ++NG+VA      + +   LSFFS
Sbjct: 111 ILNGIVASSKLRASLISSCLSFFS 134


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,931
Number of Sequences: 336
Number of extensions: 3632
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)