Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40501
         (654 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051640-1|AAK93064.1|  205|Drosophila melanogaster GM13948p pro...   143   2e-34
AE014297-307|AAF51987.1|  205|Drosophila melanogaster CG1475-PB ...   143   2e-34
BT024389-1|ABC86451.1|  122|Drosophila melanogaster IP05464p pro...    31   1.4  
AE014296-2379|AAF49745.1|  102|Drosophila melanogaster CG13482-P...    31   1.4  

>AY051640-1|AAK93064.1|  205|Drosophila melanogaster GM13948p
           protein.
          Length = 205

 Score =  143 bits (346), Expect = 2e-34
 Identities = 59/84 (70%), Positives = 77/84 (91%)
 Frame = +2

Query: 5   MTGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFL 184
           MTG +N+ +VIDGRGHLLGRLA+V+AK LL+G KV VVRCE++N+SG+F+RNK+K +++L
Sbjct: 1   MTGLTNRTVVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYL 60

Query: 185 RKRCNVNPARGPFHFRAPSKILWR 256
           RKRCNVNPARGPFHFRAPS+I ++
Sbjct: 61  RKRCNVNPARGPFHFRAPSRIFYK 84



 Score =  100 bits (240), Expect = 1e-21
 Identities = 46/94 (48%), Positives = 57/94 (60%)
 Frame = +1

Query: 253 ETVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRL 432
           + VRGMIPHKT+RG+ AL RLR +DG P P+D               L+  R YC VGRL
Sbjct: 84  KAVRGMIPHKTKRGQAALARLRVFDGIPSPYDKRRRVVVPIAMRVLTLRSDRKYCQVGRL 143

Query: 433 SHEIGWKYRDVVRKLEDKRKGKAVKKLPMKRNLR 534
           SHE+GW Y+DV++ LE KRK K    L   R L+
Sbjct: 144 SHEVGWHYQDVIKSLERKRKAKLRVTLKHNRELK 177


>AE014297-307|AAF51987.1|  205|Drosophila melanogaster CG1475-PB
           protein.
          Length = 205

 Score =  143 bits (346), Expect = 2e-34
 Identities = 59/84 (70%), Positives = 77/84 (91%)
 Frame = +2

Query: 5   MTGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFL 184
           MTG +N+ +VIDGRGHLLGRLA+V+AK LL+G KV VVRCE++N+SG+F+RNK+K +++L
Sbjct: 1   MTGLTNRTVVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYL 60

Query: 185 RKRCNVNPARGPFHFRAPSKILWR 256
           RKRCNVNPARGPFHFRAPS+I ++
Sbjct: 61  RKRCNVNPARGPFHFRAPSRIFYK 84



 Score =  100 bits (240), Expect = 1e-21
 Identities = 46/94 (48%), Positives = 57/94 (60%)
 Frame = +1

Query: 253 ETVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRL 432
           + VRGMIPHKT+RG+ AL RLR +DG P P+D               L+  R YC VGRL
Sbjct: 84  KAVRGMIPHKTKRGQAALARLRVFDGIPSPYDKRRRVVVPIAMRVLTLRSDRKYCQVGRL 143

Query: 433 SHEIGWKYRDVVRKLEDKRKGKAVKKLPMKRNLR 534
           SHE+GW Y+DV++ LE KRK K    L   R L+
Sbjct: 144 SHEVGWHYQDVIKSLERKRKAKLRVTLKHNRELK 177


>BT024389-1|ABC86451.1|  122|Drosophila melanogaster IP05464p
           protein.
          Length = 122

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 13/50 (26%), Positives = 18/50 (36%)
 Frame = -3

Query: 472 YEQHHGISIQFHGTVCLHDSNYGQVSDRRHVEQQALQHVDGYQREEGTHH 323
           +  HHG  +  HG    H  +YG      H +     H   +    G HH
Sbjct: 66  HHHHHGPPMHHHGPPPHHHHHYGPPPPPPHYDHHHHHHGSHFDHHHGPHH 115


>AE014296-2379|AAF49745.1|  102|Drosophila melanogaster CG13482-PA
           protein.
          Length = 102

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 13/50 (26%), Positives = 18/50 (36%)
 Frame = -3

Query: 472 YEQHHGISIQFHGTVCLHDSNYGQVSDRRHVEQQALQHVDGYQREEGTHH 323
           +  HHG  +  HG    H  +YG      H +     H   +    G HH
Sbjct: 46  HHHHHGPPMHHHGPPPHHHHHYGPPPPPPHYDHHHHHHGSHFDHHHGPHH 95


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,548,106
Number of Sequences: 53049
Number of extensions: 692723
Number of successful extensions: 1798
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1798
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)