Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40493
         (817 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    28   0.30 
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    27   0.69 
AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    25   2.8  
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    25   3.7  
CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    24   6.4  
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            24   6.4  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 28.3 bits (60), Expect = 0.30
 Identities = 18/70 (25%), Positives = 34/70 (48%)
 Frame = +3

Query: 519 KSQEKKVDYFERAKRLEEIPLLQKSLEEKQVQDKAFWEQQEKERIEQLIEARALDVATSE 698
           +++E +    ER K  E     ++   EK+ ++K   E++E+ER ++  E R  +    E
Sbjct: 457 RAREAREAAIEREKERELREQREREQREKEQREKEQREKEERERQQREKEQREREQREKE 516

Query: 699 RMSRMAVHRD 728
           R    A  R+
Sbjct: 517 REREAARERE 526


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 27.1 bits (57), Expect = 0.69
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
 Frame = +3

Query: 492 GTSRASARLKSQEKKVDYFERAKRLEEIPLLQKSLEEKQVQDKAFW-EQQEKERIEQLIE 668
           GTS   ARL+SQ++     E  +R+E     Q+  ++ + Q +  W +QQ+K++ +Q + 
Sbjct: 152 GTS--GARLESQQELQREQELLRRMES-QQRQEQRQQLEDQQRQRWRQQQQKQQRQQRLP 208

Query: 669 ARAL-DVATSERMSRMAV 719
           A+    V  S R  R  V
Sbjct: 209 AQQWPTVQQSVRAQRQGV 226


>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 20/69 (28%), Positives = 34/69 (49%)
 Frame = +3

Query: 519 KSQEKKVDYFERAKRLEEIPLLQKSLEEKQVQDKAFWEQQEKERIEQLIEARALDVATSE 698
           ++ E + +  E +  LEE  L+ + LEE+         QQE + +++ +  R   VA  +
Sbjct: 94  EADESESEESEESDELEEARLVAEELEER---------QQELDYLKRYLVGRLQAVAILD 144

Query: 699 RMSRMAVHR 725
           R  R AV R
Sbjct: 145 RRVRPAVIR 153


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 18/56 (32%), Positives = 29/56 (51%)
 Frame = +3

Query: 486 DEGTSRASARLKSQEKKVDYFERAKRLEEIPLLQKSLEEKQVQDKAFWEQQEKERI 653
           D+G S  + + +  +K  +     K +E   L Q+ L  KQV D+A    +EKER+
Sbjct: 134 DQGLS--ALKREQGQKLANKIRAVKYMECSALTQRGL--KQVFDEALCATEEKERM 185


>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = +3

Query: 618 KAFWEQQEKERIEQLIEARALDVATSERMSRMAVHR 725
           K  +E+Q ++R+EQ  + RA++    +R  +  +HR
Sbjct: 111 KQQYEEQHRKRLEQQSKQRAIE---KDRKKKDEIHR 143


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = +3

Query: 618 KAFWEQQEKERIEQLIEARALDVATSERMSRMAVHR 725
           K  +E+Q ++R+EQ  + RA++    +R  +  +HR
Sbjct: 111 KQQYEEQHRKRLEQQSKQRAIE---KDRKKKDEIHR 143


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 535,515
Number of Sequences: 2352
Number of extensions: 7609
Number of successful extensions: 26
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86487024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)