Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40486
         (767 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY393645-1|AAR02518.1|  149|Homo sapiens immunoglobulin heavy ch...    33   0.85 
M64590-1|AAA36463.1| 1020|Homo sapiens glycine decarboxylase pro...    33   1.1  
D90239-1|BAA14286.1| 1020|Homo sapiens glycine decarboxylase pre...    33   1.1  
M63635-1|AAA36478.1| 1020|Homo sapiens glycine decarboxylase pro...    33   1.5  
BC111995-1|AAI11996.1| 1020|Homo sapiens glycine dehydrogenase (...    33   1.5  
BC111993-1|AAI11994.1| 1020|Homo sapiens glycine dehydrogenase (...    33   1.5  
AL353718-2|CAH74116.1| 1036|Homo sapiens glycine dehydrogenase (...    33   1.5  
AL162411-3|CAH69992.1| 1036|Homo sapiens glycine dehydrogenase (...    33   1.5  
AY393012-1|AAS85950.1|  177|Homo sapiens immunoglobulin heavy ch...    32   2.0  
U84184-1|AAC51711.1|  144|Homo sapiens IgM heavy chain VH1 regio...    31   4.5  

>AY393645-1|AAR02518.1|  149|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 149

 Score = 33.5 bits (73), Expect = 0.85
 Identities = 16/54 (29%), Positives = 30/54 (55%)
 Frame = +1

Query: 385 TGVRTSCESARVGTTTPPISAVKQKMRFGLKGVAAVVTILET*NYISRSVAHLT 546
           + V+ SC+++    +  PIS V+Q    GL+ +  ++ +L   NY+ RS   +T
Sbjct: 12  SSVKVSCKASGGTFSNRPISWVRQAPGQGLEWMGRIIPVLNIVNYVQRSQGRVT 65


>M64590-1|AAA36463.1| 1020|Homo sapiens glycine decarboxylase protein.
          Length = 1020

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +3

Query: 93   LTCVLRSHWNRRHSRGETSFSFPYL 167
            LTCV  SHW+R +SR   +F  P++
Sbjct: 952  LTCVTSSHWDRPYSREVAAFPLPFM 976


>D90239-1|BAA14286.1| 1020|Homo sapiens glycine decarboxylase
            precursor protein.
          Length = 1020

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +3

Query: 93   LTCVLRSHWNRRHSRGETSFSFPYL 167
            LTCV  SHW+R +SR   +F  P++
Sbjct: 952  LTCVTSSHWDRPYSREVAAFPLPFM 976


>M63635-1|AAA36478.1| 1020|Homo sapiens glycine decarboxylase protein.
          Length = 1020

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +3

Query: 93   LTCVLRSHWNRRHSRGETSFSFPYL 167
            LTCV  SHW+R +SR   +F  P++
Sbjct: 952  LTCVTSSHWDRPYSREVAAFPLPFV 976


>BC111995-1|AAI11996.1| 1020|Homo sapiens glycine dehydrogenase
            (decarboxylating) protein.
          Length = 1020

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +3

Query: 93   LTCVLRSHWNRRHSRGETSFSFPYL 167
            LTCV  SHW+R +SR   +F  P++
Sbjct: 952  LTCVTSSHWDRPYSREVAAFPLPFV 976


>BC111993-1|AAI11994.1| 1020|Homo sapiens glycine dehydrogenase
            (decarboxylating) protein.
          Length = 1020

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +3

Query: 93   LTCVLRSHWNRRHSRGETSFSFPYL 167
            LTCV  SHW+R +SR   +F  P++
Sbjct: 952  LTCVTSSHWDRPYSREVAAFPLPFV 976


>AL353718-2|CAH74116.1| 1036|Homo sapiens glycine dehydrogenase
            (decarboxylating) protein.
          Length = 1036

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +3

Query: 93   LTCVLRSHWNRRHSRGETSFSFPYL 167
            LTCV  SHW+R +SR   +F  P++
Sbjct: 968  LTCVTSSHWDRPYSREVAAFPLPFV 992


>AL162411-3|CAH69992.1| 1036|Homo sapiens glycine dehydrogenase
            (decarboxylating) protein.
          Length = 1036

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +3

Query: 93   LTCVLRSHWNRRHSRGETSFSFPYL 167
            LTCV  SHW+R +SR   +F  P++
Sbjct: 968  LTCVTSSHWDRPYSREVAAFPLPFV 992


>AY393012-1|AAS85950.1|  177|Homo sapiens immunoglobulin heavy chain
           protein.
          Length = 177

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 16/54 (29%), Positives = 30/54 (55%)
 Frame = +1

Query: 385 TGVRTSCESARVGTTTPPISAVKQKMRFGLKGVAAVVTILET*NYISRSVAHLT 546
           + V+ SC+++    T+ PIS V+Q    GL+ +  ++ ++ T NY  +    LT
Sbjct: 12  SSVKVSCKASGGAFTSYPISWVRQAPGQGLEWMGGIIPMIGTANYAQKFQGRLT 65


>U84184-1|AAC51711.1|  144|Homo sapiens IgM heavy chain VH1 region
           precursor protein.
          Length = 144

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 16/54 (29%), Positives = 29/54 (53%)
 Frame = +1

Query: 385 TGVRTSCESARVGTTTPPISAVKQKMRFGLKGVAAVVTILET*NYISRSVAHLT 546
           + V+ SC+++    T   I+ V+Q    GL+ +  ++ IL T NY+ +    LT
Sbjct: 35  SSVKVSCKASGDSLTNYAINWVRQAPGQGLEWMGTIIPILGTANYVQKFHGRLT 88


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,241,709
Number of Sequences: 237096
Number of extensions: 2271431
Number of successful extensions: 3986
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3986
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)