Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40484
         (725 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X15805-1|CAA33804.1|  844|Drosophila melanogaster protein ( Dros...    29   6.4  
AY089428-1|AAL90166.1|  421|Drosophila melanogaster AT25102p pro...    29   6.4  
AY075481-1|AAL68292.1|  844|Drosophila melanogaster RE38659p pro...    29   6.4  
AE014296-1013|AAF50743.2|  421|Drosophila melanogaster CG10541-P...    29   6.4  
AE014134-3534|AAN11135.1|  832|Drosophila melanogaster CG2238-PC...    29   6.4  
AE014134-3533|AAG22125.2|  832|Drosophila melanogaster CG2238-PB...    29   6.4  
AE014134-3532|AAF57226.2|  844|Drosophila melanogaster CG2238-PA...    29   6.4  

>X15805-1|CAA33804.1|  844|Drosophila melanogaster protein (
           Drosophila DMEF2 genefor the translation elongation
           factor 2. ).
          Length = 844

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
 Frame = -2

Query: 328 AIHRDYYSIDNRTRQCIYFLRLKS---LTKPVYICE 230
           AIHR    I   TR+C+Y   + +   L +PVY+CE
Sbjct: 699 AIHRGGGQIIPTTRRCLYAAAITAKPRLMEPVYLCE 734


>AY089428-1|AAL90166.1|  421|Drosophila melanogaster AT25102p
           protein.
          Length = 421

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +2

Query: 320 MNSNHCKITLTTS*CRCCHKLNMN-RALILCGQGRAFLHLLL 442
           ++  HC+ +LT    +    L  N +AL+  GQ RA++ LLL
Sbjct: 224 LSKQHCQFSLTEWQAQTYENLEANAKALVSAGQLRAYIDLLL 265


>AY075481-1|AAL68292.1|  844|Drosophila melanogaster RE38659p
           protein.
          Length = 844

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
 Frame = -2

Query: 328 AIHRDYYSIDNRTRQCIYFLRLKS---LTKPVYICE 230
           AIHR    I   TR+C+Y   + +   L +PVY+CE
Sbjct: 699 AIHRGGGQIIPTTRRCLYAAAITAKPRLMEPVYLCE 734


>AE014296-1013|AAF50743.2|  421|Drosophila melanogaster CG10541-PA
           protein.
          Length = 421

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +2

Query: 320 MNSNHCKITLTTS*CRCCHKLNMN-RALILCGQGRAFLHLLL 442
           ++  HC+ +LT    +    L  N +AL+  GQ RA++ LLL
Sbjct: 224 LSKQHCQFSLTEWQAQTYENLEANAKALVSAGQLRAYIDLLL 265


>AE014134-3534|AAN11135.1|  832|Drosophila melanogaster CG2238-PC,
           isoform C protein.
          Length = 832

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
 Frame = -2

Query: 328 AIHRDYYSIDNRTRQCIYFLRLKS---LTKPVYICE 230
           AIHR    I   TR+C+Y   + +   L +PVY+CE
Sbjct: 687 AIHRGGGQIIPTTRRCLYAAAITAKPRLMEPVYLCE 722


>AE014134-3533|AAG22125.2|  832|Drosophila melanogaster CG2238-PB,
           isoform B protein.
          Length = 832

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
 Frame = -2

Query: 328 AIHRDYYSIDNRTRQCIYFLRLKS---LTKPVYICE 230
           AIHR    I   TR+C+Y   + +   L +PVY+CE
Sbjct: 687 AIHRGGGQIIPTTRRCLYAAAITAKPRLMEPVYLCE 722


>AE014134-3532|AAF57226.2|  844|Drosophila melanogaster CG2238-PA,
           isoform A protein.
          Length = 844

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
 Frame = -2

Query: 328 AIHRDYYSIDNRTRQCIYFLRLKS---LTKPVYICE 230
           AIHR    I   TR+C+Y   + +   L +PVY+CE
Sbjct: 699 AIHRGGGQIIPTTRRCLYAAAITAKPRLMEPVYLCE 734


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,451,177
Number of Sequences: 53049
Number of extensions: 614032
Number of successful extensions: 1029
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)