Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40483
(602 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118446-1|AAM48475.1| 208|Drosophila melanogaster SD17528p pro... 136 3e-32
AY118424-1|AAM48453.1| 208|Drosophila melanogaster RH06886p pro... 136 3e-32
AE014297-4463|AAN14192.1| 208|Drosophila melanogaster CG7808-PC... 136 3e-32
AJ297734-1|CAC11127.1| 702|Drosophila melanogaster hypothetical... 29 3.7
AF145663-1|AAD38638.1| 702|Drosophila melanogaster BcDNA.GH1102... 29 3.7
AE014296-1369|AAF50489.3| 702|Drosophila melanogaster CG7927-PA... 29 3.7
AY060246-1|AAL25285.1| 136|Drosophila melanogaster GH06646p pro... 28 8.5
AF160882-1|AAD46823.1| 428|Drosophila melanogaster GH12068p pro... 28 8.5
AF145305-1|AAF08386.1| 428|Drosophila melanogaster 26S proteaso... 28 8.5
AF134402-1|AAD24194.1| 431|Drosophila melanogaster Tat-binding ... 28 8.5
AE014297-3377|AAF56177.1| 428|Drosophila melanogaster CG10370-P... 28 8.5
>AY118446-1|AAM48475.1| 208|Drosophila melanogaster SD17528p
protein.
Length = 208
Score = 136 bits (328), Expect = 3e-32
Identities = 63/83 (75%), Positives = 71/83 (85%)
Frame = +3
Query: 6 IRKKRKYEFGRPTENTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIID 185
+RKKRK+E GRP NT+LG R+H VR+RGGNTK RALRL+TGNF+W SE RKTRI D
Sbjct: 21 LRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRLETGNFAWASEGVARKTRIAD 80
Query: 186 VVYNASNNELVRTKTLVKNAIVV 254
VVYNASNNELVRTKTLVKN+IVV
Sbjct: 81 VVYNASNNELVRTKTLVKNSIVV 103
Score = 126 bits (305), Expect = 2e-29
Identities = 55/87 (63%), Positives = 70/87 (80%), Gaps = 2/87 (2%)
Frame = +2
Query: 254 IDATPFRQWYESHYTLPLGRKKGAKLTEAEEA--IINKKRSQKTARKYLARQRLAKVEGA 427
IDATPFRQWYE+HY LPLGRK+ K + E+ ++ KKRS+K +KYL RQ+ KVE A
Sbjct: 104 IDATPFRQWYEAHYVLPLGRKRNPKHAQKEDENDVLTKKRSEKVMKKYLERQKYGKVEQA 163
Query: 428 LEEQFHTGRLLACVASRPGQCGRADGY 508
LE+QF +GR+LAC++SRPGQCGR+DGY
Sbjct: 164 LEDQFTSGRILACISSRPGQCGRSDGY 190
Score = 36.3 bits (80), Expect = 0.032
Identities = 15/18 (83%), Positives = 18/18 (100%)
Frame = +1
Query: 508 LLEGKELEFYLRKIKSKR 561
+LEGKELEFYL+KIKSK+
Sbjct: 191 ILEGKELEFYLKKIKSKK 208
>AY118424-1|AAM48453.1| 208|Drosophila melanogaster RH06886p
protein.
Length = 208
Score = 136 bits (328), Expect = 3e-32
Identities = 63/83 (75%), Positives = 71/83 (85%)
Frame = +3
Query: 6 IRKKRKYEFGRPTENTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIID 185
+RKKRK+E GRP NT+LG R+H VR+RGGNTK RALRL+TGNF+W SE RKTRI D
Sbjct: 21 LRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRLETGNFAWASEGVARKTRIAD 80
Query: 186 VVYNASNNELVRTKTLVKNAIVV 254
VVYNASNNELVRTKTLVKN+IVV
Sbjct: 81 VVYNASNNELVRTKTLVKNSIVV 103
Score = 126 bits (305), Expect = 2e-29
Identities = 55/87 (63%), Positives = 70/87 (80%), Gaps = 2/87 (2%)
Frame = +2
Query: 254 IDATPFRQWYESHYTLPLGRKKGAKLTEAEEA--IINKKRSQKTARKYLARQRLAKVEGA 427
IDATPFRQWYE+HY LPLGRK+ K + E+ ++ KKRS+K +KYL RQ+ KVE A
Sbjct: 104 IDATPFRQWYEAHYVLPLGRKRNPKHAQKEDENDVLTKKRSEKVMKKYLERQKYGKVEQA 163
Query: 428 LEEQFHTGRLLACVASRPGQCGRADGY 508
LE+QF +GR+LAC++SRPGQCGR+DGY
Sbjct: 164 LEDQFTSGRILACISSRPGQCGRSDGY 190
Score = 36.3 bits (80), Expect = 0.032
Identities = 15/18 (83%), Positives = 18/18 (100%)
Frame = +1
Query: 508 LLEGKELEFYLRKIKSKR 561
+LEGKELEFYL+KIKSK+
Sbjct: 191 ILEGKELEFYLKKIKSKK 208
>AE014297-4463|AAN14192.1| 208|Drosophila melanogaster CG7808-PC
protein.
Length = 208
Score = 136 bits (328), Expect = 3e-32
Identities = 63/83 (75%), Positives = 71/83 (85%)
Frame = +3
Query: 6 IRKKRKYEFGRPTENTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIID 185
+RKKRK+E GRP NT+LG R+H VR+RGGNTK RALRL+TGNF+W SE RKTRI D
Sbjct: 21 LRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRLETGNFAWASEGVARKTRIAD 80
Query: 186 VVYNASNNELVRTKTLVKNAIVV 254
VVYNASNNELVRTKTLVKN+IVV
Sbjct: 81 VVYNASNNELVRTKTLVKNSIVV 103
Score = 126 bits (305), Expect = 2e-29
Identities = 55/87 (63%), Positives = 70/87 (80%), Gaps = 2/87 (2%)
Frame = +2
Query: 254 IDATPFRQWYESHYTLPLGRKKGAKLTEAEEA--IINKKRSQKTARKYLARQRLAKVEGA 427
IDATPFRQWYE+HY LPLGRK+ K + E+ ++ KKRS+K +KYL RQ+ KVE A
Sbjct: 104 IDATPFRQWYEAHYVLPLGRKRNPKHAQKEDENDVLTKKRSEKVMKKYLERQKYGKVEQA 163
Query: 428 LEEQFHTGRLLACVASRPGQCGRADGY 508
LE+QF +GR+LAC++SRPGQCGR+DGY
Sbjct: 164 LEDQFTSGRILACISSRPGQCGRSDGY 190
Score = 36.3 bits (80), Expect = 0.032
Identities = 15/18 (83%), Positives = 18/18 (100%)
Frame = +1
Query: 508 LLEGKELEFYLRKIKSKR 561
+LEGKELEFYL+KIKSK+
Sbjct: 191 ILEGKELEFYLKKIKSKK 208
>AJ297734-1|CAC11127.1| 702|Drosophila melanogaster hypothetical
protein protein.
Length = 702
Score = 29.5 bits (63), Expect = 3.7
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = -2
Query: 262 CIYTTIAFLTRVFVRTNSLLDALYTTSMIRVLRVEHSDPQEKLPVSRRSARYLVFPPR 89
C+Y A RV R N +L L + I + R+E DP +RS RY PPR
Sbjct: 477 CLYVCRA---RVVWRQNEVLPWLESNVNIVLDRIESKDPLVNEYKEKRSLRYSGTPPR 531
>AF145663-1|AAD38638.1| 702|Drosophila melanogaster BcDNA.GH11023
protein.
Length = 702
Score = 29.5 bits (63), Expect = 3.7
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = -2
Query: 262 CIYTTIAFLTRVFVRTNSLLDALYTTSMIRVLRVEHSDPQEKLPVSRRSARYLVFPPR 89
C+Y A RV R N +L L + I + R+E DP +RS RY PPR
Sbjct: 477 CLYVCRA---RVVWRQNEVLPWLESNVNIVLDRIESKDPLVNEYKEKRSLRYSGTPPR 531
>AE014296-1369|AAF50489.3| 702|Drosophila melanogaster CG7927-PA
protein.
Length = 702
Score = 29.5 bits (63), Expect = 3.7
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = -2
Query: 262 CIYTTIAFLTRVFVRTNSLLDALYTTSMIRVLRVEHSDPQEKLPVSRRSARYLVFPPR 89
C+Y A RV R N +L L + I + R+E DP +RS RY PPR
Sbjct: 477 CLYVCRA---RVVWRQNEVLPWLESNVNIVLDRIESKDPLVNEYKEKRSLRYSGTPPR 531
>AY060246-1|AAL25285.1| 136|Drosophila melanogaster GH06646p
protein.
Length = 136
Score = 28.3 bits (60), Expect = 8.5
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = -1
Query: 299 TYNA-THTTA*MELHLYNNCILDKGLCTHQFIVRCIIHNIND--TGFAS*TFRSPREVTG 129
TYN +H + +H C + LC H F R ++ + D S R+PR +
Sbjct: 4 TYNVYSHIAIFISIHFIYLCNI---LCAHSFFARSVVVGVPDCSINLLSLLVRAPRGLRT 60
Query: 128 VQTQRTVLSISTTG 87
+Q +++ +I G
Sbjct: 61 IQPIQSIQAILVGG 74
>AF160882-1|AAD46823.1| 428|Drosophila melanogaster GH12068p
protein.
Length = 428
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +3
Query: 9 RKKRKYEFGRPTENTRLGPQRIHSVRSRGGN-TKYRALRLDTGNFSWGSEC 158
R RK EF P E R +IHS + N + L T +F+ G++C
Sbjct: 336 RLDRKIEFPHPNEEARARIMQIHSRKMNVSNDVNFEELSRSTDDFN-GAQC 385
>AF145305-1|AAF08386.1| 428|Drosophila melanogaster 26S proteasome
regulatory complexsubunit p50 protein.
Length = 428
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +3
Query: 9 RKKRKYEFGRPTENTRLGPQRIHSVRSRGGN-TKYRALRLDTGNFSWGSEC 158
R RK EF P E R +IHS + N + L T +F+ G++C
Sbjct: 336 RLDRKIEFPHPNEEARARIMQIHSRKMNVSNDVNFEELSRSTDDFN-GAQC 385
>AF134402-1|AAD24194.1| 431|Drosophila melanogaster Tat-binding
protein-1 protein.
Length = 431
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +3
Query: 9 RKKRKYEFGRPTENTRLGPQRIHSVRSRGGN-TKYRALRLDTGNFSWGSEC 158
R RK EF P E R +IHS + N + L T +F+ G++C
Sbjct: 339 RLDRKIEFPHPNEEARARIMQIHSRKMNVSNDVNFEELSRSTDDFN-GAQC 388
>AE014297-3377|AAF56177.1| 428|Drosophila melanogaster CG10370-PA
protein.
Length = 428
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +3
Query: 9 RKKRKYEFGRPTENTRLGPQRIHSVRSRGGN-TKYRALRLDTGNFSWGSEC 158
R RK EF P E R +IHS + N + L T +F+ G++C
Sbjct: 336 RLDRKIEFPHPNEEARARIMQIHSRKMNVSNDVNFEELSRSTDDFN-GAQC 385
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,646,623
Number of Sequences: 53049
Number of extensions: 543626
Number of successful extensions: 1701
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1698
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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