Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40482
(528 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein. 135 6e-34
M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein. 142 9e-34
BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16 p... 142 9e-34
BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16 p... 142 9e-34
AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16 p... 142 9e-34
AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens ... 85 1e-16
BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal... 37 0.050
BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein. 37 0.050
BC064361-1|AAH64361.1| 1056|Homo sapiens pleckstrin homology dom... 32 1.1
AK074103-1|BAB84929.1| 628|Homo sapiens FLJ00174 protein protein. 32 1.1
AJ002220-1|CAB91652.1| 926|Homo sapiens protein ( Homo sapiens ... 32 1.1
AB002354-1|BAA20813.2| 1058|Homo sapiens KIAA0356 protein protein. 32 1.1
AL365410-1|CAB96954.1| 198|Homo sapiens hypothetical protein pr... 30 4.4
M62302-2|AAA58501.1| 372|Homo sapiens growth/differentiation fa... 30 5.8
BC054882-1|AAH54882.1| 204|Homo sapiens Unknown (protein for IM... 30 5.8
AL391827-3|CAI16232.1| 689|Homo sapiens novel protein protein. 30 5.8
AL391827-2|CAI16231.1| 198|Homo sapiens novel protein protein. 30 5.8
AC003972-2|AAB94786.1| 372|Homo sapiens GDF-1 protein. 30 5.8
>BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein.
Length = 152
Score = 135 bits (326), Expect(2) = 6e-34
Identities = 59/81 (72%), Positives = 74/81 (91%)
Frame = +1
Query: 13 PIQAVQVFGRKRTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 192
P+Q+VQVFGRK+TATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 193 VDIRVTVKGGGHVAQVYAIRQ 255
VDIRV VKGGGHVAQ+Y Q
Sbjct: 66 VDIRVRVKGGGHVAQIYGESQ 86
Score = 28.7 bits (61), Expect(2) = 6e-34
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 277 PSTRDM*TKPQRRKSKTS*FNTIGVCW 357
P TR+M + RR+SKTS + G CW
Sbjct: 126 PITRNMWMRLPRRRSKTSSSSMTGPCW 152
>M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein.
Length = 146
Score = 142 bits (343), Expect = 9e-34
Identities = 62/81 (76%), Positives = 77/81 (95%)
Frame = +1
Query: 13 PIQAVQVFGRKRTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 192
P+Q+VQVFGRK+TATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 193 VDIRVTVKGGGHVAQVYAIRQ 255
VDIRV VKGGGHVAQ+YAIRQ
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQ 86
Score = 118 bits (285), Expect = 1e-26
Identities = 53/60 (88%), Positives = 59/60 (98%)
Frame = +3
Query: 255 AISKALIAFYQRYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
+ISKAL+A+YQ+YVDEASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQKSYR
Sbjct: 87 SISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
>BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 142 bits (343), Expect = 9e-34
Identities = 62/81 (76%), Positives = 77/81 (95%)
Frame = +1
Query: 13 PIQAVQVFGRKRTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 192
P+Q+VQVFGRK+TATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 193 VDIRVTVKGGGHVAQVYAIRQ 255
VDIRV VKGGGHVAQ+YAIRQ
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQ 86
Score = 118 bits (285), Expect = 1e-26
Identities = 53/60 (88%), Positives = 59/60 (98%)
Frame = +3
Query: 255 AISKALIAFYQRYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
+ISKAL+A+YQ+YVDEASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQKSYR
Sbjct: 87 SISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
>BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 142 bits (343), Expect = 9e-34
Identities = 62/81 (76%), Positives = 77/81 (95%)
Frame = +1
Query: 13 PIQAVQVFGRKRTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 192
P+Q+VQVFGRK+TATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 193 VDIRVTVKGGGHVAQVYAIRQ 255
VDIRV VKGGGHVAQ+YAIRQ
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQ 86
Score = 118 bits (285), Expect = 1e-26
Identities = 53/60 (88%), Positives = 59/60 (98%)
Frame = +3
Query: 255 AISKALIAFYQRYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
+ISKAL+A+YQ+YVDEASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQKSYR
Sbjct: 87 SISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
>AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 142 bits (343), Expect = 9e-34
Identities = 62/81 (76%), Positives = 77/81 (95%)
Frame = +1
Query: 13 PIQAVQVFGRKRTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 192
P+Q+VQVFGRK+TATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 193 VDIRVTVKGGGHVAQVYAIRQ 255
VDIRV VKGGGHVAQ+YAIRQ
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQ 86
Score = 118 bits (285), Expect = 1e-26
Identities = 53/60 (88%), Positives = 59/60 (98%)
Frame = +3
Query: 255 AISKALIAFYQRYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
+ISKAL+A+YQ+YVDEASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQKSYR
Sbjct: 87 SISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
>AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ40618 fis, clone THYMU2013089, moderately
similar to 40S RIBOSOMAL PROTEIN S16. ).
Length = 178
Score = 85.0 bits (201), Expect = 1e-16
Identities = 51/145 (35%), Positives = 68/145 (46%)
Frame = +1
Query: 16 IQAVQVFGRKRTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 195
+Q+VQ+F K A AV C+ G G +R+N PL+++ LQYKL E LLL KE+ + +
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 196 DIRVTVKGGGHVAQVYAIRQLFRRL*SPSTRDM*TKPQRRKSKTS*FNTIGVCWWLTXXX 375
DI V VKG GHV Q+YA+ Q + P + T CWW T
Sbjct: 78 DIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEASEEIKDT----LTRPCWWFTPVA 133
Query: 376 XXXXXXXXXXXXXDTRNLTVKPSTK 450
TRN + KP K
Sbjct: 134 MNPRNLQALVPVLTTRNHSSKPIKK 158
>BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal
protein S9 protein.
Length = 396
Score = 36.7 bits (81), Expect = 0.050
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 37 GRKRTATAVAYC-KRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 213
G+++TA A A K G G ++VNG L P + Q + Q ++ D+ TV
Sbjct: 274 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTV 332
Query: 214 KGGGHVAQVYAIR 252
GGG AQ AIR
Sbjct: 333 SGGGRSAQAGAIR 345
>BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein.
Length = 302
Score = 36.7 bits (81), Expect = 0.050
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 37 GRKRTATAVAYC-KRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 213
G+++TA A A K G G ++VNG L P + Q + Q ++ D+ TV
Sbjct: 180 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTV 238
Query: 214 KGGGHVAQVYAIR 252
GGG AQ AIR
Sbjct: 239 SGGGRSAQAGAIR 251
>BC064361-1|AAH64361.1| 1056|Homo sapiens pleckstrin homology domain
containing, family M (with RUN domain) member 1 protein.
Length = 1056
Score = 32.3 bits (70), Expect = 1.1
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = -1
Query: 300 RLHISGRRRSEPSK*LSDSVNLCYMTTTLDCHSDVDHREFFLAEQKDRFLKFVLQQ 133
R+H+ GRRR E K L D + LC + ++HR + L E RF LQQ
Sbjct: 914 RMHLIGRRR-EQLKLLGDYLGLCRSGALKELSKRLNHRNYLL-ESPHRFSVADLQQ 967
>AK074103-1|BAB84929.1| 628|Homo sapiens FLJ00174 protein protein.
Length = 628
Score = 32.3 bits (70), Expect = 1.1
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = -1
Query: 300 RLHISGRRRSEPSK*LSDSVNLCYMTTTLDCHSDVDHREFFLAEQKDRFLKFVLQQ 133
R+H+ GRRR E K L D + LC + ++HR + L E RF LQQ
Sbjct: 486 RMHLIGRRR-EQLKLLGDYLGLCRSGALKELSKRLNHRNYLL-ESPHRFSVADLQQ 539
>AJ002220-1|CAB91652.1| 926|Homo sapiens protein ( Homo sapiens B2
gene partial cDNA, clone B2E. ).
Length = 926
Score = 32.3 bits (70), Expect = 1.1
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = -1
Query: 300 RLHISGRRRSEPSK*LSDSVNLCYMTTTLDCHSDVDHREFFLAEQKDRFLKFVLQQ 133
R+H+ GRRR E K L D + LC + ++HR + L E RF LQQ
Sbjct: 784 RMHLIGRRR-EQLKLLGDYLGLCRSGALKELSKRLNHRNYLL-ESPHRFSVADLQQ 837
>AB002354-1|BAA20813.2| 1058|Homo sapiens KIAA0356 protein protein.
Length = 1058
Score = 32.3 bits (70), Expect = 1.1
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = -1
Query: 300 RLHISGRRRSEPSK*LSDSVNLCYMTTTLDCHSDVDHREFFLAEQKDRFLKFVLQQ 133
R+H+ GRRR E K L D + LC + ++HR + L E RF LQQ
Sbjct: 916 RMHLIGRRR-EQLKLLGDYLGLCRSGALKELSKRLNHRNYLL-ESPHRFSVADLQQ 969
>AL365410-1|CAB96954.1| 198|Homo sapiens hypothetical protein
protein.
Length = 198
Score = 30.3 bits (65), Expect = 4.4
Identities = 12/20 (60%), Positives = 17/20 (85%), Gaps = 1/20 (5%)
Frame = +2
Query: 140 STNF-RNLSFCSARKNSLWS 196
S+NF +N+SFC R++SLWS
Sbjct: 49 SSNFEKNMSFCQIRRDSLWS 68
>M62302-2|AAA58501.1| 372|Homo sapiens growth/differentiation
factor 1 protein.
Length = 372
Score = 29.9 bits (64), Expect = 5.8
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +3
Query: 327 ILVQYDRSLL--VADPRR-CEPKKFGGPGARARYQKSYR*AFNETIGWYR 467
+LV D L +A PRR EP GGPG R ++ Y +F E +GW+R
Sbjct: 236 LLVTLDPRLCHPLARPRRDAEPVLGGGPGGACRARRLYV-SFRE-VGWHR 283
>BC054882-1|AAH54882.1| 204|Homo sapiens Unknown (protein for
IMAGE:6451327) protein.
Length = 204
Score = 29.9 bits (64), Expect = 5.8
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 303 ASKKEIKD-ILVQYDRSLLVADPRRCEPK 386
ASKK +K+ +++ YD + DP +C P+
Sbjct: 16 ASKKPLKEKVVLMYDEIFMTEDPSKCSPR 44
>AL391827-3|CAI16232.1| 689|Homo sapiens novel protein protein.
Length = 689
Score = 29.9 bits (64), Expect = 5.8
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 303 ASKKEIKD-ILVQYDRSLLVADPRRCEPK 386
ASKK +K+ +++ YD + DP +C P+
Sbjct: 16 ASKKPLKEKVVLMYDEIFMTEDPSKCSPR 44
>AL391827-2|CAI16231.1| 198|Homo sapiens novel protein protein.
Length = 198
Score = 29.9 bits (64), Expect = 5.8
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 303 ASKKEIKD-ILVQYDRSLLVADPRRCEPK 386
ASKK +K+ +++ YD + DP +C P+
Sbjct: 16 ASKKPLKEKVVLMYDEIFMTEDPSKCSPR 44
>AC003972-2|AAB94786.1| 372|Homo sapiens GDF-1 protein.
Length = 372
Score = 29.9 bits (64), Expect = 5.8
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +3
Query: 327 ILVQYDRSLL--VADPRR-CEPKKFGGPGARARYQKSYR*AFNETIGWYR 467
+LV D L +A PRR EP GGPG R ++ Y +F E +GW+R
Sbjct: 236 LLVTLDPRLCHPLARPRRDAEPVLGGGPGGACRARRLYV-SFRE-VGWHR 283
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,190,694
Number of Sequences: 237096
Number of extensions: 1791454
Number of successful extensions: 4442
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4441
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5103531180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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