Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40481
(762 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC059385-1|AAH59385.1| 117|Homo sapiens ubiquitin-like 3 protein. 122 1e-27
AL158193-1|CAH73447.1| 117|Homo sapiens ubiquitin-like 3 protein. 122 1e-27
AL139188-3|CAI17023.1| 117|Homo sapiens ubiquitin-like 3 protein. 122 1e-27
AF044221-1|AAD02323.1| 117|Homo sapiens HCG-1 protein protein. 122 1e-27
CR533458-1|CAG38489.1| 117|Homo sapiens UBL3 protein. 122 1e-27
BC044582-1|AAH44582.1| 117|Homo sapiens ubiquitin-like 3 protein. 119 1e-26
AL135842-3|CAI23350.1| 118|Homo sapiens late cornified envelope... 33 1.5
BX641020-1|CAE46013.1| 602|Homo sapiens hypothetical protein pr... 30 7.8
BC036831-1|AAH36831.1| 716|Homo sapiens ARID5B protein protein. 30 7.8
AL671972-2|CAH72686.1| 1188|Homo sapiens modulator recognition f... 30 7.8
AL671972-1|CAH72685.1| 945|Homo sapiens modulator recognition f... 30 7.8
>BC059385-1|AAH59385.1| 117|Homo sapiens ubiquitin-like 3 protein.
Length = 117
Score = 122 bits (295), Expect = 1e-27
Identities = 60/81 (74%), Positives = 64/81 (79%)
Frame = +2
Query: 275 AKNIPGDKINLRLILVSGKTKEFVFSPVDSAGDIALHVYDNWPEADWATECVSRAEILRL 454
+ N+P D INLRLILVSGKTKEF+FSP DSA DIA HVYDNWP DW E VS ILRL
Sbjct: 2 SSNVPADMINLRLILVSGKTKEFLFSPNDSASDIAKHVYDNWP-MDWEEEQVSSPNILRL 60
Query: 455 IYQGRFLHSSVTLGALGLP*G 517
IYQGRFLH +VTLGAL LP G
Sbjct: 61 IYQGRFLHGNVTLGALKLPFG 81
Score = 42.3 bits (95), Expect = 0.002
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +1
Query: 493 GRSRPALGRTTVMHLVPREHLPEPNSHGQ 579
G + G+TTVMHLV RE LPEPNS GQ
Sbjct: 74 GALKLPFGKTTVMHLVARETLPEPNSQGQ 102
>AL158193-1|CAH73447.1| 117|Homo sapiens ubiquitin-like 3 protein.
Length = 117
Score = 122 bits (295), Expect = 1e-27
Identities = 60/81 (74%), Positives = 64/81 (79%)
Frame = +2
Query: 275 AKNIPGDKINLRLILVSGKTKEFVFSPVDSAGDIALHVYDNWPEADWATECVSRAEILRL 454
+ N+P D INLRLILVSGKTKEF+FSP DSA DIA HVYDNWP DW E VS ILRL
Sbjct: 2 SSNVPADMINLRLILVSGKTKEFLFSPNDSASDIAKHVYDNWP-MDWEEEQVSSPNILRL 60
Query: 455 IYQGRFLHSSVTLGALGLP*G 517
IYQGRFLH +VTLGAL LP G
Sbjct: 61 IYQGRFLHGNVTLGALKLPFG 81
Score = 42.3 bits (95), Expect = 0.002
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +1
Query: 493 GRSRPALGRTTVMHLVPREHLPEPNSHGQ 579
G + G+TTVMHLV RE LPEPNS GQ
Sbjct: 74 GALKLPFGKTTVMHLVARETLPEPNSQGQ 102
>AL139188-3|CAI17023.1| 117|Homo sapiens ubiquitin-like 3 protein.
Length = 117
Score = 122 bits (295), Expect = 1e-27
Identities = 60/81 (74%), Positives = 64/81 (79%)
Frame = +2
Query: 275 AKNIPGDKINLRLILVSGKTKEFVFSPVDSAGDIALHVYDNWPEADWATECVSRAEILRL 454
+ N+P D INLRLILVSGKTKEF+FSP DSA DIA HVYDNWP DW E VS ILRL
Sbjct: 2 SSNVPADMINLRLILVSGKTKEFLFSPNDSASDIAKHVYDNWP-MDWEEEQVSSPNILRL 60
Query: 455 IYQGRFLHSSVTLGALGLP*G 517
IYQGRFLH +VTLGAL LP G
Sbjct: 61 IYQGRFLHGNVTLGALKLPFG 81
Score = 42.3 bits (95), Expect = 0.002
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +1
Query: 493 GRSRPALGRTTVMHLVPREHLPEPNSHGQ 579
G + G+TTVMHLV RE LPEPNS GQ
Sbjct: 74 GALKLPFGKTTVMHLVARETLPEPNSQGQ 102
>AF044221-1|AAD02323.1| 117|Homo sapiens HCG-1 protein protein.
Length = 117
Score = 122 bits (295), Expect = 1e-27
Identities = 60/81 (74%), Positives = 64/81 (79%)
Frame = +2
Query: 275 AKNIPGDKINLRLILVSGKTKEFVFSPVDSAGDIALHVYDNWPEADWATECVSRAEILRL 454
+ N+P D INLRLILVSGKTKEF+FSP DSA DIA HVYDNWP DW E VS ILRL
Sbjct: 2 SSNVPADMINLRLILVSGKTKEFLFSPNDSASDIAKHVYDNWP-MDWEEEQVSSPNILRL 60
Query: 455 IYQGRFLHSSVTLGALGLP*G 517
IYQGRFLH +VTLGAL LP G
Sbjct: 61 IYQGRFLHGNVTLGALKLPFG 81
Score = 42.3 bits (95), Expect = 0.002
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +1
Query: 493 GRSRPALGRTTVMHLVPREHLPEPNSHGQ 579
G + G+TTVMHLV RE LPEPNS GQ
Sbjct: 74 GALKLPFGKTTVMHLVARETLPEPNSQGQ 102
>CR533458-1|CAG38489.1| 117|Homo sapiens UBL3 protein.
Length = 117
Score = 122 bits (294), Expect = 1e-27
Identities = 59/81 (72%), Positives = 64/81 (79%)
Frame = +2
Query: 275 AKNIPGDKINLRLILVSGKTKEFVFSPVDSAGDIALHVYDNWPEADWATECVSRAEILRL 454
+ N+P D +NLRLILVSGKTKEF+FSP DSA DIA HVYDNWP DW E VS ILRL
Sbjct: 2 SSNVPADMVNLRLILVSGKTKEFLFSPNDSASDIAKHVYDNWP-MDWEEEQVSSPNILRL 60
Query: 455 IYQGRFLHSSVTLGALGLP*G 517
IYQGRFLH +VTLGAL LP G
Sbjct: 61 IYQGRFLHGNVTLGALKLPFG 81
Score = 42.3 bits (95), Expect = 0.002
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +1
Query: 493 GRSRPALGRTTVMHLVPREHLPEPNSHGQ 579
G + G+TTVMHLV RE LPEPNS GQ
Sbjct: 74 GALKLPFGKTTVMHLVARETLPEPNSQGQ 102
>BC044582-1|AAH44582.1| 117|Homo sapiens ubiquitin-like 3 protein.
Length = 117
Score = 119 bits (286), Expect = 1e-26
Identities = 59/81 (72%), Positives = 63/81 (77%)
Frame = +2
Query: 275 AKNIPGDKINLRLILVSGKTKEFVFSPVDSAGDIALHVYDNWPEADWATECVSRAEILRL 454
+ N+P D INLRLILVSGKTKEF+FS DSA DIA HVYDNWP DW E VS ILRL
Sbjct: 2 SSNVPADMINLRLILVSGKTKEFLFSHNDSASDIAKHVYDNWP-MDWEEEQVSSPNILRL 60
Query: 455 IYQGRFLHSSVTLGALGLP*G 517
IYQGRFLH +VTLGAL LP G
Sbjct: 61 IYQGRFLHGNVTLGALKLPFG 81
Score = 42.3 bits (95), Expect = 0.002
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +1
Query: 493 GRSRPALGRTTVMHLVPREHLPEPNSHGQ 579
G + G+TTVMHLV RE LPEPNS GQ
Sbjct: 74 GALKLPFGKTTVMHLVARETLPEPNSQGQ 102
>AL135842-3|CAI23350.1| 118|Homo sapiens late cornified envelope 5A
protein.
Length = 118
Score = 32.7 bits (71), Expect = 1.5
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = -2
Query: 557 GRCSR--GTRCMTVVRPRAG-RERPESLSCAGSDPGRSVAGS 441
G CS G C++ RPR R RP+S SC GS G+ GS
Sbjct: 58 GCCSSEGGGCCLSHHRPRQSLRRRPQSSSCCGSGSGQQSGGS 99
>BX641020-1|CAE46013.1| 602|Homo sapiens hypothetical protein
protein.
Length = 602
Score = 30.3 bits (65), Expect = 7.8
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +2
Query: 581 NYVP*LNLNRGHI*IKTAVFKKKTAVITEITSGATSSLSPYGEVPP 718
NY P L +RG+ I + + KKK ++++++ + SS PYG PP
Sbjct: 87 NYTP-LLYSRGNPGIMSPLAKKK--LLSQVSGASLSSSYPYGSPPP 129
>BC036831-1|AAH36831.1| 716|Homo sapiens ARID5B protein protein.
Length = 716
Score = 30.3 bits (65), Expect = 7.8
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +2
Query: 581 NYVP*LNLNRGHI*IKTAVFKKKTAVITEITSGATSSLSPYGEVPP 718
NY P L +RG+ I + + KKK ++++++ + SS PYG PP
Sbjct: 201 NYTP-LLYSRGNPGIMSPLAKKK--LLSQVSGASLSSSYPYGSPPP 243
>AL671972-2|CAH72686.1| 1188|Homo sapiens modulator recognition
factor 2 (MRF2) protein.
Length = 1188
Score = 30.3 bits (65), Expect = 7.8
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +2
Query: 581 NYVP*LNLNRGHI*IKTAVFKKKTAVITEITSGATSSLSPYGEVPP 718
NY P L +RG+ I + + KKK ++++++ + SS PYG PP
Sbjct: 673 NYTP-LLYSRGNPGIMSPLAKKK--LLSQVSGASLSSSYPYGSPPP 715
>AL671972-1|CAH72685.1| 945|Homo sapiens modulator recognition
factor 2 (MRF2) protein.
Length = 945
Score = 30.3 bits (65), Expect = 7.8
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +2
Query: 581 NYVP*LNLNRGHI*IKTAVFKKKTAVITEITSGATSSLSPYGEVPP 718
NY P L +RG+ I + + KKK ++++++ + SS PYG PP
Sbjct: 430 NYTP-LLYSRGNPGIMSPLAKKK--LLSQVSGASLSSSYPYGSPPP 472
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,077,840
Number of Sequences: 237096
Number of extensions: 2032843
Number of successful extensions: 5038
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5032
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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