Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40474
         (597 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF132183-1|AAD34771.1|  834|Drosophila melanogaster unknown prot...    29   4.8  
AE014297-2518|AAF55551.2|  834|Drosophila melanogaster CG18617-P...    29   4.8  
AE014297-2517|AAF55552.2|  834|Drosophila melanogaster CG18617-P...    29   4.8  

>AF132183-1|AAD34771.1|  834|Drosophila melanogaster unknown
           protein.
          Length = 834

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 109 GFDGNYNGKTGIHGHEDKP 165
           GF GN     G HGH+D+P
Sbjct: 691 GFSGNEENAGGAHGHDDEP 709


>AE014297-2518|AAF55551.2|  834|Drosophila melanogaster CG18617-PB,
           isoform B protein.
          Length = 834

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 109 GFDGNYNGKTGIHGHEDKP 165
           GF GN     G HGH+D+P
Sbjct: 691 GFSGNEENAGGAHGHDDEP 709


>AE014297-2517|AAF55552.2|  834|Drosophila melanogaster CG18617-PA,
           isoform A protein.
          Length = 834

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 109 GFDGNYNGKTGIHGHEDKP 165
           GF GN     G HGH+D+P
Sbjct: 691 GFSGNEENAGGAHGHDDEP 709


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,340,955
Number of Sequences: 53049
Number of extensions: 285476
Number of successful extensions: 708
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 665
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)