Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40474
         (597 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    21   6.9  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    21   6.9  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   6.9  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     21   9.2  

>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -1

Query: 564 ILENDY*LMFIHTKYHNVLFNQVLYFLMIAI 472
           I  N+Y   + +  Y+N  +N+ LY+ +I I
Sbjct: 89  IHNNNYKYNYNNNNYNNNNYNKKLYYNIINI 119


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -1

Query: 564 ILENDY*LMFIHTKYHNVLFNQVLYFLMIAI 472
           I  N+Y   + +  Y+N  +N+ LY+ +I I
Sbjct: 89  IHNNNYKYNYNNNNYNNNNYNKKLYYNIINI 119


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 350 LWIWRLSACNCFSSR 394
           L  WRL+   CF SR
Sbjct: 368 LAFWRLTCRKCFKSR 382


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = -1

Query: 432 SLRNLLLWENQQ 397
           SL+N+LLW+ Q+
Sbjct: 109 SLKNVLLWDFQE 120


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,770
Number of Sequences: 438
Number of extensions: 1910
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)