Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40472
         (608 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128694-1|BAC87575.1|  291|Homo sapiens protein ( Homo sapiens ...    30   5.5  
AK130544-1|BAC85376.1|  122|Homo sapiens protein ( Homo sapiens ...    30   7.3  

>AK128694-1|BAC87575.1|  291|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46861 fis, clone UTERU3011092. ).
          Length = 291

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +3

Query: 114 HLFKY-CFCLKIH-HAFCCCYTQYIAFL*SINMYAYWYYYNSVCLFVHSHL 260
           H+  Y C C+ I+ H   C Y+        I+MY + + Y  +C+F+ +H+
Sbjct: 18  HIHAYACMCIFIYTHMHACVYS---CTRICIHMYIHMHAYAYICIFICTHM 65



 Score = 29.5 bits (63), Expect = 9.7
 Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = +3

Query: 114 HLFKY-CFCLKIH-HAFCCCYTQYIAFL*SINMYAYWYYYNSVCLFVHSHLKKKQWI 278
           H + Y C  +  H H +   YT+       I+MY + + Y  +C+F+++H+    +I
Sbjct: 52  HAYAYICIFICTHMHTYVYSYTRIC-----IHMYVHIHAYAYICIFIYTHMHTYMYI 103


>AK130544-1|BAC85376.1|  122|Homo sapiens protein ( Homo sapiens
           cDNA FLJ27034 fis, clone SLV07984. ).
          Length = 122

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
 Frame = +1

Query: 118 YLNIVSV*RYTMPSVAAIHSTLRFCEV*ICMHTGIIIIVFVCL---SIHTSK 264
           Y  +V V   + PS+  +HS+L + +V +C H   + ++  CL   S+H+ K
Sbjct: 31  YACVVLVDIVSSPSLEVVHSSLLYMKVPVCPHPPQLSVLSNCLISVSLHSRK 82


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,690,312
Number of Sequences: 237096
Number of extensions: 1555298
Number of successful extensions: 2075
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2066
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)