Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40470
         (676 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      98   8e-23
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          82   4e-18
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              26   0.29 
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    24   1.5  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    23   2.7  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    22   4.7  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   4.7  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   6.1  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   6.1  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 97.9 bits (233), Expect = 8e-23
 Identities = 46/96 (47%), Positives = 65/96 (67%)
 Frame = +2

Query: 5   LQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELAS 184
           L+AH++VLS CSPYF+E+ K  P +HP++ L+DV+ S L  L++F+Y GEVNV Q  L+S
Sbjct: 43  LKAHRVVLSACSPYFRELLKSTPCKHPVIVLQDVAFSDLHALVEFIYHGEVNVHQRSLSS 102

Query: 185 FISTAEQLQVKGLTGNQNEESSTHPNQSRLRGQAPG 292
           F+ TAE L+V GLT  Q  + +     S +R  A G
Sbjct: 103 FLKTAEVLRVSGLT--QQADQTDRDELSHVRALAAG 136


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 82.2 bits (194), Expect = 4e-18
 Identities = 35/74 (47%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
 Frame = +2

Query: 5   LQAHKLVLSVCSPYFQEMFKMNPTQHPIVFL-KDVSHSALRDLLQFMYQGEVNVKQEELA 181
           L+AHK+VLS CS YFQ++   NP +HP + + +DV  + L+ +++F+Y+GE++V Q EL 
Sbjct: 47  LKAHKVVLSACSSYFQKLLLSNPCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDVSQAELQ 106

Query: 182 SFISTAEQLQVKGL 223
           S + TA+QL++KGL
Sbjct: 107 SLLKTADQLKIKGL 120


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +2

Query: 128 LLQFMYQGEVNVKQEELASFIS-TAEQLQVKGLTGNQNEESS 250
           ++  +Y G VNV+ E + S++    ++  V    GN NE+++
Sbjct: 43  IIDEVYNGNVNVEDENVQSYVECMMKKFNVVDENGNFNEKNT 84


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -2

Query: 246 LSSF*LPVKPLT*SCSAVLINDANSSCLTLTSP 148
           LSS      P+T + S ++ N  NS+C    SP
Sbjct: 323 LSSSTTTTSPMTSTKSTIVRNHLNSTCSVTNSP 355


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = -3

Query: 671 ISSCRAIKTSHFHIRIVLSVISFVIVRAIFIVIPHTLI 558
           +S  R  +++  H   ++  +SF IV   +I+I  TL+
Sbjct: 391 VSKSRTKESAWRHFAAIIEWLSFFIVIFTYIIILITLV 428


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 543 PFWERQHCSHLRWYRHKFVFCRTR 472
           P  + Q CS LR  R++  +CR +
Sbjct: 54  PCTKNQQCSILRINRNRCQYCRLK 77


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 543 PFWERQHCSHLRWYRHKFVFCRTR 472
           P  + Q CS LR  R++  +CR +
Sbjct: 103 PCTKNQQCSILRINRNRCQYCRLK 126


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = +2

Query: 158 NVKQEELASFISTAEQLQVKGLTGNQNEESSTHPNQSRLR 277
           NV   +L +   T   + +  +TG+Q+++      QSR+R
Sbjct: 469 NVDVSQLVTLF-TDFYVDLDAVTGHQSQQQQEEQTQSRVR 507


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/11 (72%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = -3

Query: 308 CLCCDDL-GPG 279
           C CCD+L GPG
Sbjct: 13  CWCCDNLGGPG 23


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,402
Number of Sequences: 438
Number of extensions: 2960
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)