Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40464
         (607 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly...    43   4e-04
AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p pro...    43   4e-04

>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
            polyprotein protein.
          Length = 1333

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = -2

Query: 588  YKEGDLVAVKKTQFGTGMKLNQSF-GTIRIVKVKRKNRYNVEKVTH 454
            YK GDLVA+K+TQF  G K+   + G   +  VK   RY+V+K  +
Sbjct: 1248 YKAGDLVAIKRTQFVAGRKMASGYLGPYEVTGVKDNGRYDVKKAAN 1293



 Score = 31.1 bits (67), Expect = 1.2
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = -1

Query: 457  AQVEGPNKTTTSADFMKKW 401
            A VEGPN T+TS D MK W
Sbjct: 1292 ANVEGPNVTSTSCDNMKLW 1310


>AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p protein.
          Length = 1026

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = -2

Query: 588  YKEGDLVAVKKTQFGTGMKLNQSF-GTIRIVKVKRKNRYNVEKVTH 454
            YK GDLVA+K+TQF  G K+   + G   +  VK   RY+V+K  +
Sbjct: 941  YKAGDLVAIKRTQFVAGRKMASGYLGPYEVTGVKDNGRYDVKKAAN 986



 Score = 31.1 bits (67), Expect = 1.2
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = -1

Query: 457  AQVEGPNKTTTSADFMKKW 401
            A VEGPN T+TS D MK W
Sbjct: 985  ANVEGPNVTSTSCDNMKLW 1003


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,940,956
Number of Sequences: 53049
Number of extensions: 352081
Number of successful extensions: 641
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 641
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)