Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40455
         (281 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC051729-1|AAH51729.1| 1051|Homo sapiens RICTOR protein protein.       27   8.4  
AY515854-1|AAS79796.1| 1708|Homo sapiens rapamycin insensitive c...    27   8.4  
AB082530-1|BAC02708.1| 1275|Homo sapiens KIAA1999 protein protein.     27   8.4  

>BC051729-1|AAH51729.1| 1051|Homo sapiens RICTOR protein protein.
          Length = 1051

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 14/24 (58%), Positives = 18/24 (75%), Gaps = 2/24 (8%)
 Frame = +2

Query: 17   LRLIINFTSSIN*KCHV--LLKIK 82
            LRL+IN +SS++ KCH   LL IK
Sbjct: 960  LRLVINLSSSVSTKCHETGLLTIK 983


>AY515854-1|AAS79796.1| 1708|Homo sapiens rapamycin insensitive
            companion of mTOR protein.
          Length = 1708

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 14/24 (58%), Positives = 18/24 (75%), Gaps = 2/24 (8%)
 Frame = +2

Query: 17   LRLIINFTSSIN*KCHV--LLKIK 82
            LRL+IN +SS++ KCH   LL IK
Sbjct: 1617 LRLVINLSSSVSTKCHETGLLTIK 1640


>AB082530-1|BAC02708.1| 1275|Homo sapiens KIAA1999 protein protein.
          Length = 1275

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 14/24 (58%), Positives = 18/24 (75%), Gaps = 2/24 (8%)
 Frame = +2

Query: 17   LRLIINFTSSIN*KCHV--LLKIK 82
            LRL+IN +SS++ KCH   LL IK
Sbjct: 1184 LRLVINLSSSVSTKCHETGLLTIK 1207


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,840,762
Number of Sequences: 237096
Number of extensions: 520715
Number of successful extensions: 604
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 76,859,062
effective HSP length: 70
effective length of database: 60,262,342
effective search space used: 1386033866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)