Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40454
         (621 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        27   0.096
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    27   0.13 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   0.89 
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   3.6  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   4.8  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   8.3  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 27.5 bits (58), Expect = 0.096
 Identities = 14/51 (27%), Positives = 21/51 (41%)
 Frame = +2

Query: 41  RSHPAVTATLLDFLCRIIPNFYPPYAEKVRQGIFNSLQQIIEKRVLPNLHP 193
           R    +T+     +    P  YPP A+ V    FNS+       V+  L+P
Sbjct: 274 RLRKQITSAATPLVRSYAPERYPPLAQGVNDDAFNSVATPTPTSVMTELYP 324


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 16/46 (34%), Positives = 19/46 (41%)
 Frame = -3

Query: 436 WHELLIKVNHHHQYXXXXXXXXXXLHHPRMLVHRTQLLVLHHQYPH 299
           WHEL  K N HH+           LH  +   H    L   HQ+PH
Sbjct: 96  WHELETKFNPHHE------IKLQHLHQSKFNPHEEVKLQHLHQFPH 135


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 24.2 bits (50), Expect = 0.89
 Identities = 9/34 (26%), Positives = 19/34 (55%)
 Frame = +1

Query: 13   CHPCYAPFNEITSSSDCNIIRFLVSNHSKLLPTI 114
            CH CY+   E++ S +  +I  + +N  +++  I
Sbjct: 926  CHVCYSTIQEVSKSGE--LIHKIATNDHEIIDKI 957



 Score = 22.2 bits (45), Expect = 3.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 298 RVCQIHLHHSHSYKIF 251
           ++C +H H S S K+F
Sbjct: 225 KICYLHQHLSKSVKLF 240



 Score = 21.0 bits (42), Expect = 8.3
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +1

Query: 13   CHPCYAPFNEI 45
            CH CYA   E+
Sbjct: 1013 CHVCYATIQEV 1023


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 298 RVCQIHLHHSHSYKIF 251
           ++C +H H S S K+F
Sbjct: 243 KICYLHQHLSKSVKLF 258


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -1

Query: 84  HKKSNNVAVTAGCDLIEWCITRMAGS 7
           H  S+  A    C  ++W  T  AGS
Sbjct: 161 HPSSSYPANEISCPQVQWSATPQAGS 186


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +1

Query: 13  CHPCYAPFNEI 45
           CH CYA   E+
Sbjct: 294 CHVCYATIQEV 304


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,956
Number of Sequences: 336
Number of extensions: 3021
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)