Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40449
(712 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC336.10c |tif512||translation initiation factor|Schizosacchar... 123 3e-29
SPAC26H5.10c |tif51||translation initiation factor eIF5A|Schizos... 123 3e-29
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 28 1.1
SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic... 27 3.5
SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase Ubp8|Schizos... 27 3.5
SPCC825.04c |||N-acetyltransferase |Schizosaccharomyces pombe|ch... 27 3.5
SPAC1805.14 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 3.5
SPCPB16A4.05c |||urease accessory protein UREG |Schizosaccharomy... 26 6.1
SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase Ubp7|Schizosa... 25 8.1
SPBC418.01c |his4|SPBC887.20c|imidazoleglycerol-phosphate syntha... 25 8.1
>SPBC336.10c |tif512||translation initiation
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 157
Score = 123 bits (296), Expect = 3e-29
Identities = 54/76 (71%), Positives = 64/76 (84%)
Frame = +3
Query: 42 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 221
M + E FE G++GAS TFPMQCSALRKNG V++KGRPCKIV+MSTSKTGKHGHAKVH+
Sbjct: 1 MAEEEHVDFEGGEAGASLTFPMQCSALRKNGHVVIKGRPCKIVDMSTSKTGKHGHAKVHI 60
Query: 222 VGIDIFNGKKYKISVP 269
V +DIFNG+KY+ P
Sbjct: 61 VALDIFNGRKYEDMSP 76
Score = 95.5 bits (227), Expect = 7e-21
Identities = 40/81 (49%), Positives = 61/81 (75%)
Frame = +2
Query: 257 DICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDS 436
D+ PSTHNMDVP VKR++YQL +I DDGYL LM +G ++D+++P+G+LG ++ F+
Sbjct: 73 DMSPSTHNMDVPVVKRDEYQLVNI-DDGYLNLMTTDGTTKDDVRLPEGELGNEIEEGFEE 131
Query: 437 GKELLCTVLKSCGEECVIAVK 499
GK+L+ TV+ + GEE +A +
Sbjct: 132 GKDLIITVVSAMGEEIALACR 152
>SPAC26H5.10c |tif51||translation initiation factor
eIF5A|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 123 bits (296), Expect = 3e-29
Identities = 54/76 (71%), Positives = 64/76 (84%)
Frame = +3
Query: 42 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 221
M + E FE G++GAS TFPMQCSALRKNG V++KGRPCKIV+MSTSKTGKHGHAKVH+
Sbjct: 1 MAEEEHVDFEGGEAGASLTFPMQCSALRKNGHVVIKGRPCKIVDMSTSKTGKHGHAKVHI 60
Query: 222 VGIDIFNGKKYKISVP 269
V +DIFNG+KY+ P
Sbjct: 61 VALDIFNGRKYEDMSP 76
Score = 95.9 bits (228), Expect = 5e-21
Identities = 40/81 (49%), Positives = 61/81 (75%)
Frame = +2
Query: 257 DICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDS 436
D+ PSTHNMDVP VKR++YQL +I DDGYL LM +G ++D+++P+G+LG ++ FD
Sbjct: 73 DMSPSTHNMDVPVVKRDEYQLVNI-DDGYLNLMTTDGTTKDDVRLPEGELGNEIEEGFDE 131
Query: 437 GKELLCTVLKSCGEECVIAVK 499
G++L+ TV+ + GEE +A +
Sbjct: 132 GRDLIITVVSAMGEETALACR 152
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 28.3 bits (60), Expect = 1.1
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = -2
Query: 507 VFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 376
+ +LTA+ S+P S+V N+S P++ S V P + S ++ SS
Sbjct: 2568 ITSLTALNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSS 2613
Score = 27.1 bits (57), Expect = 2.6
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 495 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 376
T + S+P STV N+S P++ S V P + S +L SS
Sbjct: 1420 TVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSSVLNSS 1461
Score = 26.2 bits (55), Expect = 4.6
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 495 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 376
+ + S+P STV N S P++ S V + P + S +L SS
Sbjct: 820 SVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSSVLNSS 861
Score = 26.2 bits (55), Expect = 4.6
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -2
Query: 495 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSSRRSPLSAI 352
T + S+P STV N+S P++ S + P + S +L SS S+I
Sbjct: 1192 TVVNTSTPITSSTVVNSSTPITSSTVLNTSTPITSSSVLNSSTPITSSSI 1241
Score = 26.2 bits (55), Expect = 4.6
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -2
Query: 495 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 376
+ + S+P STV N+S P++ S + +P + S +L SS
Sbjct: 1252 SVLNSSTPITSSTVVNSSTPITSSTALNTSIPITSSSVLNSS 1293
Score = 26.2 bits (55), Expect = 4.6
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -2
Query: 495 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 376
T + S+P STV N+S P++ S + + P + S +L SS
Sbjct: 1372 TVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSS 1413
Score = 26.2 bits (55), Expect = 4.6
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 495 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 376
T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1732 TVVNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 1773
Score = 26.2 bits (55), Expect = 4.6
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -2
Query: 495 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 376
T + S+P STV N+S P++ S + + P + S +L SS
Sbjct: 2212 TVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSS 2253
Score = 26.2 bits (55), Expect = 4.6
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -2
Query: 495 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 376
T + S+P STV N+S P++ S + + P + S +L SS
Sbjct: 2500 TVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSS 2541
Score = 26.2 bits (55), Expect = 4.6
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -2
Query: 495 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 376
T + S+P STV N+S P++ S + + P + S +L SS
Sbjct: 2800 TVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSS 2841
Score = 25.8 bits (54), Expect = 6.1
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 495 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 376
T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 484 TVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 525
Score = 25.8 bits (54), Expect = 6.1
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 495 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 376
T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 892 TVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 933
Score = 25.8 bits (54), Expect = 6.1
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 495 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 376
T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1048 TVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 1089
Score = 25.8 bits (54), Expect = 6.1
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 495 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 376
T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1504 TVVNTSTPITSSTVVNSSTPITSSTVLNTSTPITSSSVLNSS 1545
Score = 25.8 bits (54), Expect = 6.1
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 495 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 376
T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1828 TVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 1869
Score = 25.8 bits (54), Expect = 6.1
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 495 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 376
T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 2020 TVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 2061
Score = 25.8 bits (54), Expect = 6.1
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 495 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 376
T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 2284 TVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 2325
Score = 25.8 bits (54), Expect = 6.1
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 495 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 376
T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 2596 TVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 2637
Score = 25.8 bits (54), Expect = 6.1
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 495 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 376
T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 2692 TVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 2733
Score = 25.8 bits (54), Expect = 6.1
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 495 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 376
T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 2920 TVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 2961
Score = 25.8 bits (54), Expect = 6.1
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 495 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 376
T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 3280 TVVNTSTPITSSTVVNSSTPITSSTTLNTSTPITSSSVLNSS 3321
Score = 25.4 bits (53), Expect = 8.1
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 495 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 376
+ + S+P STV N S P++ S V + P + S +L SS
Sbjct: 2488 SVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSS 2529
Score = 25.4 bits (53), Expect = 8.1
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 495 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 376
+ + S+P STV N S P++ S V + P + S +L SS
Sbjct: 2788 SVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSS 2829
Score = 25.4 bits (53), Expect = 8.1
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -2
Query: 489 MTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSSRRSPLSAI 352
+ S+P STV N+S P++ S + P + S +L SS S+I
Sbjct: 3138 LNSSTPITSSTVVNSSTPITSSTTLNTSTPITSSSVLNSSTAITSSSI 3185
Score = 25.4 bits (53), Expect = 8.1
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -2
Query: 507 VFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 376
V + + + S+P STV N+S P++ S + P + S +L SS
Sbjct: 3360 VTSSSVLNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 3405
Score = 25.4 bits (53), Expect = 8.1
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -2
Query: 495 TAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 376
TA+ S+P STV N+S P++ S + + + S IL SS
Sbjct: 3424 TALNTSTPITSSTVVNSSTPITSSSVLNSSTAIASSSILNSS 3465
>SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic
subunit Bgs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1729
Score = 26.6 bits (56), Expect = 3.5
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 278 NMDVPHVKREDYQLTDISDDGYL 346
NM +P+++ E Q+ D + D YL
Sbjct: 968 NMSIPYIRGEYVQMIDANQDNYL 990
>SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase
Ubp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 449
Score = 26.6 bits (56), Expect = 3.5
Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 102 PMQCSALRKNGFVMLKGRPCKIVEMSTSKTGK-HGHAKVHLVGIDIFNGKKY 254
P +CS ++ ++ C V G+ H H++G+D+ NG Y
Sbjct: 35 PRRCSTCKRINKRSIRCLSCHSVGCLWGHHGEEHAMEHTHMIGVDVKNGHTY 86
>SPCC825.04c |||N-acetyltransferase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 204
Score = 26.6 bits (56), Expect = 3.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 134 FRYAEGSSMQDC*NVHIQNRKARPR*SSLGWD 229
+ + E +Q C N+ +N +A R SS GWD
Sbjct: 41 YHHLEKGLLQQCFNLVKKNMEALYRQSSFGWD 72
>SPAC1805.14 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 452
Score = 26.6 bits (56), Expect = 3.5
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 423 LTSTAARNCCAPC*NPAVRSASSPSKQTHSRQINQLSIYRV-NKLLIFYNQQLLH 584
+ T+ N C+P ++S S ++ HSR +SI V N+ Y QLLH
Sbjct: 31 MKKTSDENGCSPFTLKPIKSTSDRKRRRHSR----MSIVNVWNQSPTSYRDQLLH 81
>SPCPB16A4.05c |||urease accessory protein UREG |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 286
Score = 25.8 bits (54), Expect = 6.1
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +1
Query: 586 NVKHNIVYKFNLKNEYNTEVVLGDRGG 666
+V N+V L++E+NTE++L + GG
Sbjct: 159 DVSGNLVALEELQSEFNTELLLVESGG 185
>SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase
Ubp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 875
Score = 25.4 bits (53), Expect = 8.1
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 296 VKREDYQLTDISDDGYL 346
+KREDY+LT ++ GYL
Sbjct: 91 IKREDYELTLCANCGYL 107
>SPBC418.01c |his4|SPBC887.20c|imidazoleglycerol-phosphate
synthase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 541
Score = 25.4 bits (53), Expect = 8.1
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 226 GLISSMVKSIRYLSLHTQHGRTPREARR 309
G + S++ ++RYL TQ R P + +
Sbjct: 11 GNVRSLINAVRYLGFETQWIRNPHDIEK 38
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,960,719
Number of Sequences: 5004
Number of extensions: 61882
Number of successful extensions: 306
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 294
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 331187010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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