Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40447
(455 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X03342-1|CAA27048.1| 135|Homo sapiens protein ( Human mRNA for ... 100 5e-21
BC070209-1|AAH70209.1| 135|Homo sapiens ribosomal protein L32 p... 100 5e-21
BC011514-1|AAH11514.1| 135|Homo sapiens ribosomal protein L32 p... 100 5e-21
AB061831-1|BAB79469.1| 135|Homo sapiens ribosomal protein L32 p... 100 5e-21
BC015974-1|AAH15974.1| 107|Homo sapiens RPS29 protein protein. 87 4e-17
BC053996-1|AAH53996.1| 33|Homo sapiens RPL32P3 protein protein. 51 2e-06
BC015389-1|AAH15389.1| 82|Homo sapiens RPL32P3 protein protein. 49 7e-06
BC094811-1|AAH94811.1| 602|Homo sapiens ADAMTSL4 protein protein. 29 10.0
BC071852-1|AAH71852.1| 602|Homo sapiens ADAMTSL4 protein protein. 29 10.0
BC027478-1|AAH27478.1| 424|Homo sapiens ADAMTSL4 protein protein. 29 10.0
AL356356-13|CAI15500.2| 1074|Homo sapiens ADAMTS-like 4 protein. 29 10.0
AF217974-1|AAG17217.1| 237|Homo sapiens unknown protein. 29 10.0
>X03342-1|CAA27048.1| 135|Homo sapiens protein ( Human mRNA for
ribosomal protein L32. ).
Length = 135
Score = 99.5 bits (237), Expect = 5e-21
Identities = 48/65 (73%), Positives = 53/65 (81%)
Frame = +3
Query: 243 PKWIRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 422
P RK LVHNVKELE+L+M N+ YCAEIAH VSSK RK IVERA QL+IRVTN ARLR
Sbjct: 71 PSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLR 130
Query: 423 SQENE 437
S+ENE
Sbjct: 131 SEENE 135
Score = 84.6 bits (200), Expect = 1e-16
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +2
Query: 41 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 172
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVR
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVR 46
Score = 58.8 bits (136), Expect = 8e-09
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = +1
Query: 172 QRFKGQYLMPNIGYGSNKKTRHMLPNGF 255
+RFKGQ LMPNIGYGSNKKT+HMLP+GF
Sbjct: 47 RRFKGQILMPNIGYGSNKKTKHMLPSGF 74
>BC070209-1|AAH70209.1| 135|Homo sapiens ribosomal protein L32
protein.
Length = 135
Score = 99.5 bits (237), Expect = 5e-21
Identities = 48/65 (73%), Positives = 53/65 (81%)
Frame = +3
Query: 243 PKWIRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 422
P RK LVHNVKELE+L+M N+ YCAEIAH VSSK RK IVERA QL+IRVTN ARLR
Sbjct: 71 PSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLR 130
Query: 423 SQENE 437
S+ENE
Sbjct: 131 SEENE 135
Score = 84.6 bits (200), Expect = 1e-16
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +2
Query: 41 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 172
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVR
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVR 46
Score = 58.8 bits (136), Expect = 8e-09
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = +1
Query: 172 QRFKGQYLMPNIGYGSNKKTRHMLPNGF 255
+RFKGQ LMPNIGYGSNKKT+HMLP+GF
Sbjct: 47 RRFKGQILMPNIGYGSNKKTKHMLPSGF 74
>BC011514-1|AAH11514.1| 135|Homo sapiens ribosomal protein L32
protein.
Length = 135
Score = 99.5 bits (237), Expect = 5e-21
Identities = 48/65 (73%), Positives = 53/65 (81%)
Frame = +3
Query: 243 PKWIRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 422
P RK LVHNVKELE+L+M N+ YCAEIAH VSSK RK IVERA QL+IRVTN ARLR
Sbjct: 71 PSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLR 130
Query: 423 SQENE 437
S+ENE
Sbjct: 131 SEENE 135
Score = 84.6 bits (200), Expect = 1e-16
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +2
Query: 41 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 172
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVR
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVR 46
Score = 58.8 bits (136), Expect = 8e-09
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = +1
Query: 172 QRFKGQYLMPNIGYGSNKKTRHMLPNGF 255
+RFKGQ LMPNIGYGSNKKT+HMLP+GF
Sbjct: 47 RRFKGQILMPNIGYGSNKKTKHMLPSGF 74
>AB061831-1|BAB79469.1| 135|Homo sapiens ribosomal protein L32
protein.
Length = 135
Score = 99.5 bits (237), Expect = 5e-21
Identities = 48/65 (73%), Positives = 53/65 (81%)
Frame = +3
Query: 243 PKWIRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 422
P RK LVHNVKELE+L+M N+ YCAEIAH VSSK RK IVERA QL+IRVTN ARLR
Sbjct: 71 PSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLR 130
Query: 423 SQENE 437
S+ENE
Sbjct: 131 SEENE 135
Score = 84.6 bits (200), Expect = 1e-16
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +2
Query: 41 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 172
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVR
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVR 46
Score = 58.8 bits (136), Expect = 8e-09
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = +1
Query: 172 QRFKGQYLMPNIGYGSNKKTRHMLPNGF 255
+RFKGQ LMPNIGYGSNKKT+HMLP+GF
Sbjct: 47 RRFKGQILMPNIGYGSNKKTKHMLPSGF 74
>BC015974-1|AAH15974.1| 107|Homo sapiens RPS29 protein protein.
Length = 107
Score = 86.6 bits (205), Expect = 4e-17
Identities = 51/109 (46%), Positives = 65/109 (59%), Gaps = 2/109 (1%)
Frame = +3
Query: 117 MTNLRGIGVNLEVLTTESAAIQGSILDAQHRLRF--QQEDPSYAPKWIRKVLVHNVKELE 290
M+ LR G N EVLTT I+G + + + ++ P K LVHNVKELE
Sbjct: 1 MSKLRVTGGNTEVLTT--GFIEGLRARSMPNIGYGRNKKTKHILPSGFWKFLVHNVKELE 58
Query: 291 ILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLRSQENE 437
+L++ N+ YC EI H VSSK K I+ERA Q+ IRVTNA A L S E+E
Sbjct: 59 VLLVSNKSYCVEITHDVSSKNCKAILERAAQVVIRVTNANASLHSAESE 107
>BC053996-1|AAH53996.1| 33|Homo sapiens RPL32P3 protein protein.
Length = 33
Score = 51.2 bits (117), Expect = 2e-06
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = +2
Query: 41 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKR 133
A+R + +P IVKKRTK+FIRHQSDRY K+KR
Sbjct: 3 ALRSLVKPKIVKKRTKKFIRHQSDRYVKIKR 33
>BC015389-1|AAH15389.1| 82|Homo sapiens RPL32P3 protein protein.
Length = 82
Score = 49.2 bits (112), Expect = 7e-06
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +2
Query: 41 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLK 130
A+R + +P IVKKRTK+FIRHQSDRY K+K
Sbjct: 3 ALRSLVKPKIVKKRTKKFIRHQSDRYVKIK 32
>BC094811-1|AAH94811.1| 602|Homo sapiens ADAMTSL4 protein protein.
Length = 602
Score = 28.7 bits (61), Expect = 10.0
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 312 SCFASSRFPAL*HCELGPYESIWEHMTG 229
SC SR P + C LGP E W TG
Sbjct: 418 SCPTGSRPPDMRACSLGPCERTWRWYTG 445
>BC071852-1|AAH71852.1| 602|Homo sapiens ADAMTSL4 protein protein.
Length = 602
Score = 28.7 bits (61), Expect = 10.0
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 312 SCFASSRFPAL*HCELGPYESIWEHMTG 229
SC SR P + C LGP E W TG
Sbjct: 418 SCPTGSRPPDMRACSLGPCERTWRWYTG 445
>BC027478-1|AAH27478.1| 424|Homo sapiens ADAMTSL4 protein protein.
Length = 424
Score = 28.7 bits (61), Expect = 10.0
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 312 SCFASSRFPAL*HCELGPYESIWEHMTG 229
SC SR P + C LGP E W TG
Sbjct: 240 SCPTGSRPPDMRACSLGPCERTWRWYTG 267
>AL356356-13|CAI15500.2| 1074|Homo sapiens ADAMTS-like 4 protein.
Length = 1074
Score = 28.7 bits (61), Expect = 10.0
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 312 SCFASSRFPAL*HCELGPYESIWEHMTG 229
SC SR P + C LGP E W TG
Sbjct: 890 SCPTGSRPPDMRACSLGPCERTWRWYTG 917
>AF217974-1|AAG17217.1| 237|Homo sapiens unknown protein.
Length = 237
Score = 28.7 bits (61), Expect = 10.0
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 312 SCFASSRFPAL*HCELGPYESIWEHMTG 229
SC SR P + C LGP E W TG
Sbjct: 53 SCPTGSRPPDMRACSLGPCERTWRWYTG 80
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,045,414
Number of Sequences: 237096
Number of extensions: 1289498
Number of successful extensions: 3652
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3651
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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