Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40447
         (455 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49 ...   113   1e-27
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   1.2  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    23   2.1  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   6.3  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   6.3  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   6.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   8.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   8.4  

>AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49
           protein.
          Length = 134

 Score =  113 bits (271), Expect = 1e-27
 Identities = 56/65 (86%), Positives = 59/65 (90%)
 Frame = +3

Query: 243 PKWIRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 422
           P   RKVLVHNVKELE+LMMQNRK+CAEIAHG SSKKRK IVERAQQLSIRVT A+ARLR
Sbjct: 70  PTGFRKVLVHNVKELEVLMMQNRKFCAEIAHGGSSKKRKSIVERAQQLSIRVTYASARLR 129

Query: 423 SQENE 437
           SQENE
Sbjct: 130 SQENE 134



 Score = 96.3 bits (229), Expect = 1e-22
 Identities = 42/45 (93%), Positives = 44/45 (97%)
 Frame = +2

Query: 38  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 172
           MAIRPVYRPTIVKKRTK+FIRHQSDRY KLKRNWRKP+GIDNRVR
Sbjct: 1   MAIRPVYRPTIVKKRTKKFIRHQSDRYSKLKRNWRKPKGIDNRVR 45



 Score = 62.9 bits (146), Expect = 2e-12
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = +1

Query: 172 QRFKGQYLMPNIGYGSNKKTRHMLPNGF 255
           +RFKGQYLMPNIGYGSNKKTRHMLP GF
Sbjct: 46  RRFKGQYLMPNIGYGSNKKTRHMLPTGF 73


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 12/46 (26%), Positives = 26/46 (56%)
 Frame = +3

Query: 159 TTESAAIQGSILDAQHRLRFQQEDPSYAPKWIRKVLVHNVKELEIL 296
           TT S A+    L+   + + ++E  ++ PK  +++   ++KE+E L
Sbjct: 311 TTMSNALYELALNQDVQKKLREEINTFCPKNNKELKYDDIKEMEYL 356


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = +3

Query: 144 NLEVLTTESAAIQGSILDAQHRLRFQQEDPSYAPKWIRKV 263
           NL V   +S A+    L     LR+ QE    AP WI  V
Sbjct: 305 NLMVFYEKSLALAAFSLMLTSILRYLQELHVDAPTWISSV 344


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 425 GPEASGRIRHSDA 387
           GP   GR +H+DA
Sbjct: 45  GPNELGRFKHTDA 57


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 425 GPEASGRIRHSDA 387
           GP   GR +H+DA
Sbjct: 50  GPNELGRFKHTDA 62


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 425 GPEASGRIRHSDA 387
           GP   GR +H+DA
Sbjct: 50  GPNELGRFKHTDA 62


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 314  LPVLHHQDFQLFNI 273
            LP L H D Q FN+
Sbjct: 1031 LPELRHGDIQGFNV 1044


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 314  LPVLHHQDFQLFNI 273
            LP L H D Q FN+
Sbjct: 1027 LPELRHGDIQGFNV 1040


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,694
Number of Sequences: 438
Number of extensions: 2368
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12066642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)