Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40443
(681 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0022 + 154399-154428,154528-154716,155469-155619,155724-15... 103 1e-22
02_05_0830 + 32066419-32066676,32067779-32067820,32068375-320688... 97 2e-20
08_02_1563 + 27886202-27886446,27886533-27886618,27886942-278870... 96 3e-20
06_03_1341 + 29458085-29458198,29458448-29458526,29458923-294589... 94 1e-19
06_01_0798 - 5944815-5944888,5945084-5945243,5945319-5945356,594... 90 1e-18
09_06_0098 + 20850535-20850612,20851258-20851333,20851474-208515... 86 3e-17
10_01_0309 + 3417602-3418147 84 1e-16
06_03_1340 + 29455210-29455290,29455493-29455571,29455767-294558... 83 3e-16
02_01_0160 + 1116160-1116678 83 3e-16
09_06_0359 + 22508900-22509439 82 5e-16
08_02_1578 - 27992848-27992893,27993431-27993515,27994107-279942... 79 4e-15
06_01_0214 + 1634171-1634173,1634263-1634742 71 9e-13
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 64 1e-10
03_06_0417 - 33782577-33782687,33782996-33783052,33783110-337832... 60 1e-10
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 63 2e-10
01_02_0015 + 10191793-10191957,10192085-10192229,10192331-101924... 62 3e-10
06_03_1075 + 27399279-27399376,27399449-27399555,27400791-274008... 61 9e-10
06_03_1076 + 27409107-27409204,27409731-27409835,27409915-274100... 60 1e-09
01_05_0478 - 22587881-22588021,22588126-22588266,22588436-225886... 45 6e-05
07_03_0359 - 17201711-17201803,17202185-17202332,17202437-172025... 42 5e-04
01_01_0077 - 585670-585787,585921-586687 40 0.001
11_06_0322 + 22358505-22358642,22358690-22358791,22359444-223595... 39 0.003
02_01_0086 + 613113-613532 39 0.004
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 32 0.37
08_02_0053 + 11721658-11721689,11721960-11722710 29 3.4
05_06_0043 + 25143513-25143866,25144010-25144191,25144284-251443... 29 4.5
01_05_0559 + 23281408-23282457,23282580-23282942,23283938-232839... 28 6.0
>05_01_0022 +
154399-154428,154528-154716,155469-155619,155724-155812,
156391-156445,156533-156618,156705-156857
Length = 250
Score = 103 bits (247), Expect = 1e-22
Identities = 48/68 (70%), Positives = 55/68 (80%)
Frame = +1
Query: 259 GAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRP 438
G G +SMANAG +TNGSQFFI TVKTPWLDGRHVVFG+V+EGMD+V+ IE T DRP
Sbjct: 176 GPGVVSMANAGPNTNGSQFFICTVKTPWLDGRHVVFGQVIEGMDIVKMIESQETDRGDRP 235
Query: 439 VKDVVISD 462
K VVIS+
Sbjct: 236 KKKVVISE 243
Score = 62.5 bits (145), Expect = 3e-10
Identities = 35/71 (49%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = +2
Query: 44 LGLFGKDC--T*DN*ELLSTSSET*GGGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIY 217
+GL+G D T +N L T + G GYKGS FHRVIK+FMIQ +SIY
Sbjct: 104 IGLYGDDVPQTAENFRALCTGEK--GFGYKGSSFHRVIKDFMIQGGDFDKGNGTGGKSIY 161
Query: 218 GERFEDENFKL 250
G F+DENFKL
Sbjct: 162 GRTFKDENFKL 172
>02_05_0830 +
32066419-32066676,32067779-32067820,32068375-32068875,
32069048-32069135,32069251-32069303,32069499-32069603,
32069886-32069961,32070038-32070075,32070162-32070242,
32070353-32070364
Length = 417
Score = 96.7 bits (230), Expect = 2e-20
Identities = 43/66 (65%), Positives = 53/66 (80%)
Frame = +1
Query: 265 GWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVK 444
G LSMANAG DTNGSQFFITT +TP LDG+HVVFG+V++GM VV+ +E G +DRP+
Sbjct: 147 GMLSMANAGPDTNGSQFFITTTRTPHLDGKHVVFGRVIKGMGVVRSMEHVSVGESDRPIT 206
Query: 445 DVVISD 462
D+VI D
Sbjct: 207 DIVIVD 212
Score = 45.2 bits (102), Expect = 5e-05
Identities = 21/43 (48%), Positives = 24/43 (55%)
Frame = +2
Query: 125 KGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLK 253
KGS HR++K FM+Q SIYG FEDENF LK
Sbjct: 100 KGSCIHRIVKGFMVQGGDITAGDGTGGESIYGLNFEDENFVLK 142
>08_02_1563 +
27886202-27886446,27886533-27886618,27886942-27887030,
27887193-27887432,27887527-27887648,27888103-27888178,
27888276-27888383,27888465-27888641,27888959-27889176,
27889313-27889445,27889584-27889807,27890052-27890205,
27890297-27890380
Length = 651
Score = 95.9 bits (228), Expect = 3e-20
Identities = 43/62 (69%), Positives = 51/62 (82%)
Frame = +1
Query: 271 LSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDV 450
LSMANAG +TNGSQFFITTV TPWLD +H VFG+V++GMDVVQ+IE T ND+P +DV
Sbjct: 582 LSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKGMDVVQQIEKVKTDKNDKPYQDV 641
Query: 451 VI 456
I
Sbjct: 642 KI 643
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/44 (45%), Positives = 22/44 (50%)
Frame = +2
Query: 116 GGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFK 247
G Y FHRVIK FMIQ +SI+G FEDE K
Sbjct: 530 GYYDNLIFHRVIKGFMIQ-TGDPLGDGTGGQSIWGREFEDEFHK 572
>06_03_1341 +
29458085-29458198,29458448-29458526,29458923-29458970,
29459064-29459087,29459554-29459736,29459845-29459920,
29460020-29460158
Length = 220
Score = 93.9 bits (223), Expect = 1e-19
Identities = 47/69 (68%), Positives = 52/69 (75%)
Frame = +1
Query: 259 GAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRP 438
G G LSMANAG+DTNGSQFFITTV T WLDG+HVVFGKVL GMDVV KIE + P
Sbjct: 148 GPGLLSMANAGRDTNGSQFFITTVTTSWLDGKHVVFGKVLSGMDVVYKIEAEGQQSGS-P 206
Query: 439 VKDVVISDT 465
VVI+D+
Sbjct: 207 KSKVVIADS 215
Score = 52.0 bits (119), Expect = 4e-07
Identities = 32/77 (41%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Frame = +2
Query: 44 LGLFGKDC--T*DN*ELLSTSSET*GGG-----YKGSKFHRVIKNFMIQXXXXXXXXXXX 202
+GLFGK T +N L T + G +KGS FHR+I +FMIQ
Sbjct: 69 MGLFGKTVPKTAENFRALCTGEKGTGKSGKALHFKGSAFHRIIPSFMIQGGDFTLGDGRG 128
Query: 203 XRSIYGERFEDENFKLK 253
SIYG +F DENFK+K
Sbjct: 129 GESIYGTKFADENFKIK 145
>06_01_0798 -
5944815-5944888,5945084-5945243,5945319-5945356,
5945438-5945513,5946114-5946218,5947486-5947986,
5948638-5948710,5949550-5949593,5949938-5950174
Length = 435
Score = 90.2 bits (214), Expect = 1e-18
Identities = 41/66 (62%), Positives = 50/66 (75%)
Frame = +1
Query: 265 GWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVK 444
G LSMAN+G +TNGSQFFITT +TP LDG+HVVFG+V++GM VV+ +E G DRP
Sbjct: 165 GMLSMANSGPNTNGSQFFITTTRTPHLDGKHVVFGRVIKGMGVVRSVEHAPVGEADRPTS 224
Query: 445 DVVISD 462
DV I D
Sbjct: 225 DVEIVD 230
Score = 47.6 bits (108), Expect = 9e-06
Identities = 23/43 (53%), Positives = 26/43 (60%)
Frame = +2
Query: 125 KGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLK 253
+GS FHRVIK FM+Q SIYG +FEDENF LK
Sbjct: 118 QGSCFHRVIKGFMVQGGDITAGDGTGGESIYGLKFEDENFVLK 160
>09_06_0098 +
20850535-20850612,20851258-20851333,20851474-20851521,
20851758-20851781,20851875-20851994,20852235-20852310,
20852385-20852547
Length = 194
Score = 85.8 bits (203), Expect = 3e-17
Identities = 38/65 (58%), Positives = 50/65 (76%)
Frame = +1
Query: 271 LSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDV 450
++MAN+G D+NGSQF+ITT+KT WLDG HVVFG+V++GMD V IE N +P K V
Sbjct: 118 IAMANSGPDSNGSQFYITTIKTSWLDGEHVVFGRVIQGMDYVYAIEGGAGTYNGKPRKKV 177
Query: 451 VISDT 465
VI+D+
Sbjct: 178 VITDS 182
Score = 31.9 bits (69), Expect = 0.48
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2
Query: 122 YKGSKFHRVIKNFMIQ 169
YKGS+FHR+I FMIQ
Sbjct: 89 YKGSRFHRIIPGFMIQ 104
>10_01_0309 + 3417602-3418147
Length = 181
Score = 83.8 bits (198), Expect = 1e-16
Identities = 41/68 (60%), Positives = 50/68 (73%)
Frame = +1
Query: 259 GAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRP 438
G G +SMANAG +TNGSQFFIT K PWLDGRHV FG+V+ GM V+ I+ T T + +
Sbjct: 111 GPGVVSMANAGPNTNGSQFFITVDKAPWLDGRHVAFGRVVAGMGAVRAIDRTGTWSG-KT 169
Query: 439 VKDVVISD 462
VK VVI+D
Sbjct: 170 VKPVVITD 177
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 3/47 (6%)
Frame = +2
Query: 122 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIY---GERFEDENFKLK 253
YKGS FHRV+ FM Q S F DE F +K
Sbjct: 62 YKGSAFHRVVPGFMCQGGDITAGNGTGGESALDGAARHFPDEGFAVK 108
>06_03_1340 +
29455210-29455290,29455493-29455571,29455767-29455814,
29455908-29455931,29456433-29456615,29456730-29456805,
29456937-29457072
Length = 208
Score = 82.6 bits (195), Expect = 3e-16
Identities = 44/67 (65%), Positives = 48/67 (71%)
Frame = +1
Query: 265 GWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVK 444
G LSMAN KDTNGSQFFITTVK LDG+HVVFGKVL GMDVV KIE + P
Sbjct: 139 GLLSMANYAKDTNGSQFFITTVKLTRLDGKHVVFGKVLSGMDVVYKIE-AEGSQSGTPRS 197
Query: 445 DVVISDT 465
V+ISD+
Sbjct: 198 KVLISDS 204
Score = 45.2 bits (102), Expect = 5e-05
Identities = 21/43 (48%), Positives = 24/43 (55%)
Frame = +2
Query: 122 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKL 250
YKG+ FHR+I FMIQ SIYG F DENFK+
Sbjct: 91 YKGTPFHRIIPGFMIQGGDTVSGNGTGCDSIYGGMFPDENFKI 133
>02_01_0160 + 1116160-1116678
Length = 172
Score = 82.6 bits (195), Expect = 3e-16
Identities = 42/66 (63%), Positives = 48/66 (72%)
Frame = +1
Query: 265 GWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVK 444
G LSMANAG +TNGSQFFI TV WLDG+HVVFG+V+EGMDVV+ IE V K
Sbjct: 103 GILSMANAGPNTNGSQFFICTVPCSWLDGKHVVFGRVVEGMDVVKAIE-KVGSRGGSTAK 161
Query: 445 DVVISD 462
VVI+D
Sbjct: 162 PVVIAD 167
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/44 (52%), Positives = 24/44 (54%)
Frame = +2
Query: 122 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLK 253
YKGS FHRVI FM Q SIYGE+F DE FK K
Sbjct: 55 YKGSTFHRVIPEFMCQGGDFTRGNGTGGESIYGEKFADEVFKFK 98
>09_06_0359 + 22508900-22509439
Length = 179
Score = 81.8 bits (193), Expect = 5e-16
Identities = 39/68 (57%), Positives = 50/68 (73%)
Frame = +1
Query: 259 GAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRP 438
G G LSMANAG +TNGSQFFI T +T WLDG+HVVFGKV++G VV+K+E +G+
Sbjct: 103 GPGVLSMANAGPNTNGSQFFICTTRTTWLDGKHVVFGKVVDGYTVVEKMEQVGSGSGG-T 161
Query: 439 VKDVVISD 462
+ V+I D
Sbjct: 162 AERVLIED 169
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/44 (54%), Positives = 27/44 (61%)
Frame = +2
Query: 122 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLK 253
YKGS FHR+I NFM Q SIYG+RF DENFKL+
Sbjct: 57 YKGSAFHRIIPNFMCQGGDFTRGNGTGGESIYGDRFADENFKLR 100
>08_02_1578 -
27992848-27992893,27993431-27993515,27994107-27994240,
27994579-27994640,27994736-27994831,27994952-27995023
Length = 164
Score = 78.6 bits (185), Expect = 4e-15
Identities = 36/69 (52%), Positives = 49/69 (71%)
Frame = +1
Query: 259 GAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRP 438
GAG LSMANAG +TNGSQFFIT LDG+H +FG+V +GM++V+++ T +DRP
Sbjct: 92 GAGILSMANAGPNTNGSQFFITLAPCQSLDGKHTIFGRVSKGMEIVKRLGSVQTDKSDRP 151
Query: 439 VKDVVISDT 465
+ +V I T
Sbjct: 152 IHEVKILRT 160
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 116 GGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDE 238
G Y FHR+IK+F++Q SIYG +FEDE
Sbjct: 44 GYYDNVIFHRIIKDFIVQ-GGDPTGTGRGGESIYGAKFEDE 83
>06_01_0214 + 1634171-1634173,1634263-1634742
Length = 160
Score = 70.9 bits (166), Expect = 9e-13
Identities = 31/62 (50%), Positives = 43/62 (69%)
Frame = +1
Query: 265 GWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVK 444
G +SMAN+G +TNGSQFFIT K P L+G + VF KV+ G +V+ +E TG DRP+
Sbjct: 85 GVMSMANSGPNTNGSQFFITYAKQPHLNGHYTVFAKVIHGFEVLDLMEKAQTGPGDRPLA 144
Query: 445 DV 450
++
Sbjct: 145 EI 146
Score = 32.3 bits (70), Expect = 0.37
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +2
Query: 116 GGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDE 238
G Y G+ FHR IK FMIQ SI+G++F DE
Sbjct: 35 GYYDGTIFHRNIKGFMIQ-GGDPTGTGKGGTSIWGKKFADE 74
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 64.1 bits (149), Expect = 1e-10
Identities = 36/67 (53%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Frame = +1
Query: 265 GWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIE-MTVTGANDRPV 441
G LSMANAG +TNGSQFFIT LD + VFGK++ G DV+++IE + V GA PV
Sbjct: 107 GLLSMANAGPNTNGSQFFITFKHNSRLDRKSTVFGKLILGNDVLKRIEYVDVHGAGSTPV 166
Query: 442 KDVVISD 462
V I D
Sbjct: 167 VPVRIVD 173
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/44 (54%), Positives = 25/44 (56%)
Frame = +2
Query: 122 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLK 253
YKGS FHRVIK FM Q SIYG FEDENF L+
Sbjct: 59 YKGSLFHRVIKGFMAQGGDFSNGDGSGGESIYGGTFEDENFVLR 102
>03_06_0417 -
33782577-33782687,33782996-33783052,33783110-33783205,
33783252-33783284,33783543-33783599,33783968-33784060,
33784308-33784395,33784812-33784835,33784956-33785164
Length = 255
Score = 60.5 bits (140), Expect(2) = 1e-10
Identities = 30/52 (57%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Frame = +1
Query: 310 QFFITTVKTPWLDGRHVVFGKVL-EGMDVVQKIEMTVTGANDRPVKDVVISD 462
QFFIT K WLD +HVVFG+VL +GM V+KIE TG N+RP VIS+
Sbjct: 200 QFFITCAKCEWLDNKHVVFGRVLGDGMLAVRKIENVATGPNNRPKLACVISE 251
Score = 51.6 bits (118), Expect = 6e-07
Identities = 24/45 (53%), Positives = 28/45 (62%)
Frame = +2
Query: 119 GYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLK 253
GYKG +FHRVIK+FMIQ SIYG +F+DENF K
Sbjct: 85 GYKGCQFHRVIKDFMIQGGDYMKGDGTGCTSIYGTKFDDENFIAK 129
Score = 23.0 bits (47), Expect(2) = 1e-10
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 274 SMANAGKDTNGSQFF 318
S AN+G ++NGSQ F
Sbjct: 156 SKANSGVNSNGSQIF 170
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 62.9 bits (146), Expect = 2e-10
Identities = 32/83 (38%), Positives = 47/83 (56%)
Frame = +1
Query: 259 GAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRP 438
G G +SMAN+G TNGSQFFI P L+ +H VFG V+ G+ + +E +DRP
Sbjct: 427 GRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVFGMVVGGLTTLSAMEKVPVDDDDRP 486
Query: 439 VKDVVISDTKTEVVAEPFSVTKE 507
++++ I K V P++ E
Sbjct: 487 LEEIKI--LKVSVFVNPYTEPDE 507
Score = 34.7 bits (76), Expect = 0.069
Identities = 22/46 (47%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 116 GGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDE-NFKL 250
G Y G FHR IKNFMIQ SI+G+ F+DE N KL
Sbjct: 379 GYYNGLIFHRSIKNFMIQ-GGDPTGTGSGGESIWGKPFKDELNSKL 423
>01_02_0015 +
10191793-10191957,10192085-10192229,10192331-10192419,
10193009-10193063,10193607-10193692,10194006-10194065
Length = 199
Score = 62.5 bits (145), Expect = 3e-10
Identities = 36/72 (50%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +2
Query: 44 LGLFGKDC--T*DN*ELLSTSSET*GGGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIY 217
+GLFG+ T DN L T + G GYKG FHR+IK+FMIQ RSIY
Sbjct: 84 IGLFGEVVPKTVDNFRALCTGDK--GYGYKGCSFHRIIKDFMIQGGDFQNNNGTGGRSIY 141
Query: 218 GERFEDENFKLK 253
GE F+DENF LK
Sbjct: 142 GECFDDENFTLK 153
Score = 44.8 bits (101), Expect = 6e-05
Identities = 21/25 (84%), Positives = 21/25 (84%)
Frame = +1
Query: 259 GAGWLSMANAGKDTNGSQFFITTVK 333
G G LSMANAG DTNGSQFFI TVK
Sbjct: 156 GPGVLSMANAGPDTNGSQFFICTVK 180
>06_03_1075 +
27399279-27399376,27399449-27399555,27400791-27400898,
27401763-27401860,27401983-27402033,27402137-27402228,
27402360-27402459,27402765-27402884,27402977-27403045,
27403299-27403345,27403428-27403483,27404760-27404800,
27405155-27405260,27406728-27406860,27406937-27407357
Length = 548
Score = 60.9 bits (141), Expect = 9e-10
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +1
Query: 265 GWLSMANAGKDTNGSQFFITTVK-TPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPV 441
G ++MA+AG++ N SQF+IT +LD +H VFG V EG D + KI T RP
Sbjct: 122 GTIAMASAGENCNASQFYITLRDGVDYLDDKHTVFGMVAEGFDTITKINETYVDDKGRPF 181
Query: 442 KDVVISDTKTEVVAEPF 492
KD+ I T V+ +PF
Sbjct: 182 KDIRI--RHTYVLDDPF 196
>06_03_1076 +
27409107-27409204,27409731-27409835,27409915-27410032,
27410180-27410230,27410328-27410419,27410558-27410657,
27411018-27411137,27411227-27411295,27411468-27411514,
27411597-27411652,27412293-27412333,27412570-27412675,
27413891-27414023,27414096-27414645
Length = 561
Score = 60.5 bits (140), Expect = 1e-09
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +1
Query: 265 GWLSMANAGKDTNGSQFFITTVK-TPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPV 441
G ++MA+AG++ N SQF+IT +LD +H VFG V EG D + KI T RP
Sbjct: 92 GTIAMASAGENCNASQFYITLRDDVDYLDDKHTVFGMVAEGFDTLTKISETYVDDKGRPF 151
Query: 442 KDVVISDTKTEVVAEPF 492
KD+ I T V+ +PF
Sbjct: 152 KDIRIK--HTYVLDDPF 166
>01_05_0478 -
22587881-22588021,22588126-22588266,22588436-22588643,
22589199-22589238,22589425-22589647,22590826-22590970,
22591053-22591156,22591298-22591396,22591506-22591684,
22591948-22592167
Length = 499
Score = 44.8 bits (101), Expect = 6e-05
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Frame = +1
Query: 265 GWLSMANAGKD-TNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMT--VTGANDR 435
G ++ ANAG +NGSQFFI+ + WLD ++ +FGKV G + + + T +DR
Sbjct: 97 GLVACANAGTPHSNGSQFFISLDRCDWLDKKNTIFGKV-TGDSIFNLLALADIETDKDDR 155
Query: 436 PVKDVVISDTKTEVVAEPF 492
PV I EV+ PF
Sbjct: 156 PVYPQKI--LSVEVLWNPF 172
Score = 34.3 bits (75), Expect = 0.091
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +2
Query: 116 GGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDE 238
G Y G+ FHRVIK+F++Q SIYG F DE
Sbjct: 47 GYYDGTLFHRVIKSFLVQ-GGDPTGSGTGGESIYGAPFADE 86
>07_03_0359 -
17201711-17201803,17202185-17202332,17202437-17202574,
17204331-17204416,17205233-17205283,17205774-17205858,
17205930-17206081
Length = 250
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +1
Query: 295 DTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRP 438
+ G FITT P L+ + VVFG+V+ G D+VQ+IE T + +P
Sbjct: 186 NNKGFDLFITTAPIPDLNDKLVVFGQVINGQDIVQEIEEVDTDEHYQP 233
>01_01_0077 - 585670-585787,585921-586687
Length = 294
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +1
Query: 301 NGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVT 420
NG++F ITT P LD +V G+V++GMDV+ KI T
Sbjct: 206 NGTEFVITTGDAPELDASALVVGRVVDGMDVLGKIAAVPT 245
>11_06_0322 +
22358505-22358642,22358690-22358791,22359444-22359557,
22359643-22359791,22360155-22360227,22360308-22360397,
22360752-22360791,22361579-22361661,22362614-22362775
Length = 316
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +1
Query: 265 GWLSMA-NAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVT 420
G LSM ++ ++ GS F I P LDG++ VFG++ +G D ++K+E T
Sbjct: 162 GILSMGRHSDPNSGGSSFSILLGDAPHLDGQYAVFGRLTKGDDTLRKLEQLPT 214
>02_01_0086 + 613113-613532
Length = 139
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +1
Query: 277 MANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTV 417
+ N + N SQFF + PW DG +VVFG ++ G ++ IE V
Sbjct: 75 LPNGSAENNISQFF---TRVPWFDGNYVVFGCIISGFHNLKAIEAEV 118
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 32.3 bits (70), Expect = 0.37
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +1
Query: 352 RHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISD 462
+HVVFGKV+ GM +++K+E V +P +V I D
Sbjct: 94 KHVVFGKVVTGMPLLKKLE-AVGSDTGKPTCEVKIVD 129
>08_02_0053 + 11721658-11721689,11721960-11722710
Length = 260
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Frame = +1
Query: 310 QFFITTVKTPW--LDGRHVVFGKVLEG 384
+F +TT P LDG+++VFG VLEG
Sbjct: 234 EFLVTTGPGPCPELDGQNIVFGTVLEG 260
>05_06_0043 +
25143513-25143866,25144010-25144191,25144284-25144374,
25144452-25144568,25144922-25144976,25145008-25145093,
25145190-25145300,25145564-25145608,25145695-25145740,
25146078-25146152,25146902-25146971,25147128-25147437,
25147778-25147851,25147996-25148151,25148416-25148539
Length = 631
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/38 (44%), Positives = 18/38 (47%)
Frame = +3
Query: 9 RLVMTNIGYYCDWDYLEKTVPKTTENFFQLAQKPEGEG 122
RLV N+GY D TVPKTTE Q A G
Sbjct: 539 RLVAFNLGYLPGGDKTIITVPKTTELALQAASSIVSSG 576
>01_05_0559 +
23281408-23282457,23282580-23282942,23283938-23283991,
23284088-23284156
Length = 511
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = -2
Query: 515 VSISFVTLKGSATTSVFVSDITTSLTGRSFAPVTVISIFCTTSIPSKTLPKTTCLPSNQG 336
VS + VTL + TS +S T S+ +F+P V S T +I + T+ +T S+
Sbjct: 370 VSSTAVTLSSTTFTSSSISTTTISIASSTFSPAAVSS--TTIAIAASTI--STASISSSA 425
Query: 335 VLTVV 321
+ +V+
Sbjct: 426 IASVL 430
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,280,085
Number of Sequences: 37544
Number of extensions: 314921
Number of successful extensions: 682
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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