Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40442
         (598 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113564-1|AAM29569.1|  179|Drosophila melanogaster RH09246p pro...    43   3e-04
AY071743-1|AAL49365.2|  198|Drosophila melanogaster RH48588p pro...    43   3e-04
AE013599-3623|AAM68253.1|  179|Drosophila melanogaster CG30185-P...    43   3e-04

>AY113564-1|AAM29569.1|  179|Drosophila melanogaster RH09246p
           protein.
          Length = 179

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
 Frame = +3

Query: 279 ENKNVEGFVTIILSMAS--KCGTA----SSEEQRLLTYQWLEYISMFSNQAVANSTFAFK 440
           + K+V GF +I+ S+AS  K  TA    +S E     YQW+E+  ++      +   + +
Sbjct: 35  QKKSVAGFASILESLASESKSETAQNSRASREVEAQVYQWIEFSVLYVAPGSKDKYVSKQ 94

Query: 441 FLQEIGRALQSNTYLTGQFLTIAML 515
            L +  +   S +YL G F+T+A L
Sbjct: 95  LLADFNKLFASKSYLVGHFITLADL 119


>AY071743-1|AAL49365.2|  198|Drosophila melanogaster RH48588p
           protein.
          Length = 198

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
 Frame = +3

Query: 279 ENKNVEGFVTIILSMAS--KCGTA----SSEEQRLLTYQWLEYISMFSNQAVANSTFAFK 440
           + K+V GF +I+ S+AS  K  TA    +S E     YQW+E+  ++      +   + +
Sbjct: 54  QKKSVAGFASILESLASESKSETAQNSRASREVEAQVYQWIEFSVLYVAPGSKDKYVSKQ 113

Query: 441 FLQEIGRALQSNTYLTGQFLTIAML 515
            L +  +   S +YL G F+T+A L
Sbjct: 114 LLADFNKLFASKSYLVGHFITLADL 138


>AE013599-3623|AAM68253.1|  179|Drosophila melanogaster CG30185-PA
           protein.
          Length = 179

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
 Frame = +3

Query: 279 ENKNVEGFVTIILSMAS--KCGTA----SSEEQRLLTYQWLEYISMFSNQAVANSTFAFK 440
           + K+V GF +I+ S+AS  K  TA    +S E     YQW+E+  ++      +   + +
Sbjct: 35  QKKSVAGFASILESLASESKSETAQNSRASREVEAQVYQWIEFSVLYVAPGSKDKYVSKQ 94

Query: 441 FLQEIGRALQSNTYLTGQFLTIAML 515
            L +  +   S +YL G F+T+A L
Sbjct: 95  LLADFNKLFASKSYLVGHFITLADL 119


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,982,790
Number of Sequences: 53049
Number of extensions: 504165
Number of successful extensions: 915
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)