Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40440
(658 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC064370-1|AAH64370.1| 2335|Homo sapiens PRP8 pre-mRNA processin... 180 3e-45
AY486135-1|AAS64748.1| 436|Homo sapiens apoptosis-regulated pro... 180 3e-45
AF092565-1|AAC61776.1| 2335|Homo sapiens splicing factor Prp8 pr... 180 3e-45
AB007510-1|BAA22563.1| 2335|Homo sapiens PRP8 protein protein. 177 2e-44
AY486134-1|AAS64747.1| 437|Homo sapiens apoptosis-regulated pro... 177 3e-44
U16296-1|AAA98443.1| 1591|Homo sapiens TIAM1 protein protein. 31 3.6
BC117196-1|AAI17197.1| 1591|Homo sapiens T-cell lymphoma invasio... 31 3.6
BC117192-1|AAI17193.1| 1591|Homo sapiens T-cell lymphoma invasio... 31 3.6
AB209101-1|BAD92338.1| 1060|Homo sapiens T-cell lymphoma invasio... 31 3.6
BC039004-1|AAH39004.1| 612|Homo sapiens carnitine O-octanoyltra... 31 4.8
AF168793-1|AAF03234.1| 612|Homo sapiens peroxisomal carnitine o... 31 4.8
AF073770-1|AAD41654.1| 612|Homo sapiens carnitine octanoyltrans... 31 4.8
>BC064370-1|AAH64370.1| 2335|Homo sapiens PRP8 pre-mRNA processing
factor 8 homolog (S. cerevisiae) protein.
Length = 2335
Score = 180 bits (439), Expect = 3e-45
Identities = 85/87 (97%), Positives = 87/87 (100%)
Frame = +2
Query: 251 FLFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKG 430
F+FNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKG
Sbjct: 1808 FIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKG 1867
Query: 431 MLDPLEVHLLDFPNIVIKGSELQLPFR 511
MLDPLEVHLLDFPNIVIKGSELQLPF+
Sbjct: 1868 MLDPLEVHLLDFPNIVIKGSELQLPFQ 1894
Score = 177 bits (432), Expect = 2e-44
Identities = 86/96 (89%), Positives = 86/96 (89%)
Frame = +3
Query: 3 LIQQAMAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTN 182
LIQQAMAKIMKANPALYVLRERIRK LQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTN
Sbjct: 1725 LIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTN 1784
Query: 183 VYRVTIHKTFEGNLTTKPINGAIFYSIPELDSYSLK 290
VYRVTIHKTFEGNLTTKPINGAIF P LK
Sbjct: 1785 VYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLK 1820
Score = 85.8 bits (203), Expect = 1e-16
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +1
Query: 508 QACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTA 624
QACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTA
Sbjct: 1894 QACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTA 1932
>AY486135-1|AAS64748.1| 436|Homo sapiens apoptosis-regulated
protein 1 protein.
Length = 436
Score = 180 bits (439), Expect = 3e-45
Identities = 85/87 (97%), Positives = 87/87 (100%)
Frame = +2
Query: 251 FLFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKG 430
F+FNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKG
Sbjct: 306 FIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKG 365
Query: 431 MLDPLEVHLLDFPNIVIKGSELQLPFR 511
MLDPLEVHLLDFPNIVIKGSELQLPF+
Sbjct: 366 MLDPLEVHLLDFPNIVIKGSELQLPFQ 392
Score = 167 bits (405), Expect = 4e-41
Identities = 80/90 (88%), Positives = 80/90 (88%)
Frame = +3
Query: 21 AKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTI 200
AKIMKANPALYVLRERIRK LQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTI
Sbjct: 229 AKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTI 288
Query: 201 HKTFEGNLTTKPINGAIFYSIPELDSYSLK 290
HKTFEGNLTTKPINGAIF P LK
Sbjct: 289 HKTFEGNLTTKPINGAIFIFNPRTGQLFLK 318
Score = 84.2 bits (199), Expect = 4e-16
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +1
Query: 508 QACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTA 624
QACLKVE+FGDLILKATEPQMVLFNLYDDWLKTISSYTA
Sbjct: 392 QACLKVEEFGDLILKATEPQMVLFNLYDDWLKTISSYTA 430
>AF092565-1|AAC61776.1| 2335|Homo sapiens splicing factor Prp8
protein.
Length = 2335
Score = 180 bits (439), Expect = 3e-45
Identities = 85/87 (97%), Positives = 87/87 (100%)
Frame = +2
Query: 251 FLFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKG 430
F+FNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKG
Sbjct: 1808 FIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKG 1867
Query: 431 MLDPLEVHLLDFPNIVIKGSELQLPFR 511
MLDPLEVHLLDFPNIVIKGSELQLPF+
Sbjct: 1868 MLDPLEVHLLDFPNIVIKGSELQLPFQ 1894
Score = 177 bits (432), Expect = 2e-44
Identities = 86/96 (89%), Positives = 86/96 (89%)
Frame = +3
Query: 3 LIQQAMAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTN 182
LIQQAMAKIMKANPALYVLRERIRK LQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTN
Sbjct: 1725 LIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTN 1784
Query: 183 VYRVTIHKTFEGNLTTKPINGAIFYSIPELDSYSLK 290
VYRVTIHKTFEGNLTTKPINGAIF P LK
Sbjct: 1785 VYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLK 1820
Score = 85.8 bits (203), Expect = 1e-16
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +1
Query: 508 QACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTA 624
QACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTA
Sbjct: 1894 QACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTA 1932
>AB007510-1|BAA22563.1| 2335|Homo sapiens PRP8 protein protein.
Length = 2335
Score = 177 bits (432), Expect = 2e-44
Identities = 86/96 (89%), Positives = 86/96 (89%)
Frame = +3
Query: 3 LIQQAMAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTN 182
LIQQAMAKIMKANPALYVLRERIRK LQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTN
Sbjct: 1725 LIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTN 1784
Query: 183 VYRVTIHKTFEGNLTTKPINGAIFYSIPELDSYSLK 290
VYRVTIHKTFEGNLTTKPINGAIF P LK
Sbjct: 1785 VYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLK 1820
Score = 177 bits (432), Expect = 2e-44
Identities = 84/87 (96%), Positives = 86/87 (98%)
Frame = +2
Query: 251 FLFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKG 430
F+FNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRK
Sbjct: 1808 FIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKD 1867
Query: 431 MLDPLEVHLLDFPNIVIKGSELQLPFR 511
MLDPLEVHLLDFPNIVIKGSELQLPF+
Sbjct: 1868 MLDPLEVHLLDFPNIVIKGSELQLPFQ 1894
Score = 85.8 bits (203), Expect = 1e-16
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +1
Query: 508 QACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTA 624
QACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTA
Sbjct: 1894 QACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTA 1932
>AY486134-1|AAS64747.1| 437|Homo sapiens apoptosis-regulated
protein 2 protein.
Length = 437
Score = 177 bits (431), Expect = 3e-44
Identities = 84/87 (96%), Positives = 86/87 (98%)
Frame = +2
Query: 251 FLFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKG 430
F+FN RTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKG
Sbjct: 307 FIFNTRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKG 366
Query: 431 MLDPLEVHLLDFPNIVIKGSELQLPFR 511
MLDPLEVHLLDFPNIVIKGSELQLPF+
Sbjct: 367 MLDPLEVHLLDFPNIVIKGSELQLPFQ 393
Score = 175 bits (427), Expect = 9e-44
Identities = 83/84 (98%), Positives = 83/84 (98%)
Frame = +3
Query: 3 LIQQAMAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTN 182
LIQQAMAKIMKANPALYVLRERIRK LQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTN
Sbjct: 224 LIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTN 283
Query: 183 VYRVTIHKTFEGNLTTKPINGAIF 254
VYRVTIHKTFEGNLTTKPINGAIF
Sbjct: 284 VYRVTIHKTFEGNLTTKPINGAIF 307
Score = 85.8 bits (203), Expect = 1e-16
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +1
Query: 508 QACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTA 624
QACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTA
Sbjct: 393 QACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTA 431
>U16296-1|AAA98443.1| 1591|Homo sapiens TIAM1 protein protein.
Length = 1591
Score = 31.1 bits (67), Expect = 3.6
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +1
Query: 34 KLILPCMCSENVYVKHCNCILQNLLNLTSPVRTMENCSLIKSFGSLMTRMCIV*QFTKPL 213
K+I + +E YVK NC+++ L + L FG+L + +F K L
Sbjct: 1043 KVICELLETERTYVKDLNCLMERYLKPLQKETFLTQDELDVLFGNLTEMVEFQVEFLKTL 1102
Query: 214 KET*QLNPSME 246
++ +L P +E
Sbjct: 1103 EDGVRLVPDLE 1113
>BC117196-1|AAI17197.1| 1591|Homo sapiens T-cell lymphoma invasion and
metastasis 1 protein.
Length = 1591
Score = 31.1 bits (67), Expect = 3.6
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +1
Query: 34 KLILPCMCSENVYVKHCNCILQNLLNLTSPVRTMENCSLIKSFGSLMTRMCIV*QFTKPL 213
K+I + +E YVK NC+++ L + L FG+L + +F K L
Sbjct: 1043 KVICELLETERTYVKDLNCLMERYLKPLQKETFLTQDELDVLFGNLTEMVEFQVEFLKTL 1102
Query: 214 KET*QLNPSME 246
++ +L P +E
Sbjct: 1103 EDGVRLVPDLE 1113
>BC117192-1|AAI17193.1| 1591|Homo sapiens T-cell lymphoma invasion and
metastasis 1 protein.
Length = 1591
Score = 31.1 bits (67), Expect = 3.6
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +1
Query: 34 KLILPCMCSENVYVKHCNCILQNLLNLTSPVRTMENCSLIKSFGSLMTRMCIV*QFTKPL 213
K+I + +E YVK NC+++ L + L FG+L + +F K L
Sbjct: 1043 KVICELLETERTYVKDLNCLMERYLKPLQKETFLTQDELDVLFGNLTEMVEFQVEFLKTL 1102
Query: 214 KET*QLNPSME 246
++ +L P +E
Sbjct: 1103 EDGVRLVPDLE 1113
>AB209101-1|BAD92338.1| 1060|Homo sapiens T-cell lymphoma invasion and
metastasis 1 variant protein.
Length = 1060
Score = 31.1 bits (67), Expect = 3.6
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +1
Query: 34 KLILPCMCSENVYVKHCNCILQNLLNLTSPVRTMENCSLIKSFGSLMTRMCIV*QFTKPL 213
K+I + +E YVK NC+++ L + L FG+L + +F K L
Sbjct: 872 KVICELLETERTYVKDLNCLMERYLKPLQKETFLTQDELDVLFGNLTEMVEFQVEFLKTL 931
Query: 214 KET*QLNPSME 246
++ +L P +E
Sbjct: 932 EDGVRLVPDLE 942
>BC039004-1|AAH39004.1| 612|Homo sapiens carnitine
O-octanoyltransferase protein.
Length = 612
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/50 (26%), Positives = 30/50 (60%)
Frame = +3
Query: 12 QAMAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGELFSNQII 161
+A ++ +P L E+I+ +L +YS E + P+++ ++Y E+ + +I
Sbjct: 250 KAREYLIGLDPENLALLEKIQSSLLVYSMEDSSPHVTPEDYSEIIAAILI 299
>AF168793-1|AAF03234.1| 612|Homo sapiens peroxisomal carnitine
octanoyltransferase protein.
Length = 612
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/50 (26%), Positives = 30/50 (60%)
Frame = +3
Query: 12 QAMAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGELFSNQII 161
+A ++ +P L E+I+ +L +YS E + P+++ ++Y E+ + +I
Sbjct: 250 KAREYLIGLDPENLALLEKIQSSLLVYSMEDSSPHVTPEDYSEIIAAILI 299
>AF073770-1|AAD41654.1| 612|Homo sapiens carnitine
octanoyltransferase protein.
Length = 612
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/50 (26%), Positives = 30/50 (60%)
Frame = +3
Query: 12 QAMAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGELFSNQII 161
+A ++ +P L E+I+ +L +YS E + P+++ ++Y E+ + +I
Sbjct: 250 KAREYLIGLDPENLALLEKIQSSLLVYSMEDSSPHVTPEDYSEIIAAILI 299
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,891,132
Number of Sequences: 237096
Number of extensions: 1929508
Number of successful extensions: 3652
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3652
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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