Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40437
         (632 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0326 - 24407201-24407374,24407397-24407460,24408266-244086...    29   2.3  
01_01_0725 - 5668288-5669094,5669724-5669909,5670039-5670296           28   5.4  
11_04_0334 - 16489768-16489796,16490588-16490936                       28   7.1  
08_01_0196 - 1619165-1619605,1620393-1620677,1621040-1621144           28   7.1  
07_03_1610 - 28131623-28131710,28132017-28132321,28132921-281331...    28   7.1  
09_04_0594 - 18831011-18831360,18831562-18832111,18832364-188334...    27   9.4  
06_02_0222 + 13229330-13229501,13230175-13230275,13230381-132305...    27   9.4  
01_07_0248 + 42261373-42261609,42261733-42261905,42261986-422620...    27   9.4  

>04_04_0326 -
           24407201-24407374,24407397-24407460,24408266-24408689,
           24408885-24409057,24409178-24409275,24409723-24409853,
           24410053-24410174,24411091-24411245,24411976-24412081,
           24412328-24412419,24412499-24412620,24413444-24413544,
           24413636-24413849,24414173-24414311,24415228-24415584
          Length = 823

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 9/29 (31%), Positives = 20/29 (68%)
 Frame = -1

Query: 503 EHGRQRCPVSISGVLSWLIKVISCFSGDN 417
           +H  +R  +++  +LSW++ V+ CF+G +
Sbjct: 171 DHVSKRALIALFLILSWVVVVVQCFTGSD 199


>01_01_0725 - 5668288-5669094,5669724-5669909,5670039-5670296
          Length = 416

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +2

Query: 485 IFA-FRAHGTEMWPKHCNKNTTLETV 559
           IFA  RAHG    PKHC+ N  L+ +
Sbjct: 44  IFAGLRAHGGYKLPKHCDNNEVLKAL 69


>11_04_0334 - 16489768-16489796,16490588-16490936
          Length = 125

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -2

Query: 328 PLNTHCGIVRRVDIGCV 278
           P    CG VRRVD+GC+
Sbjct: 65  PSRACCGAVRRVDVGCL 81


>08_01_0196 - 1619165-1619605,1620393-1620677,1621040-1621144
          Length = 276

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +2

Query: 497 RAHGTEMWPKHCNKNTTLETV*TLFYYVHWSRKLKN 604
           RA+G   W +   ++  L  V  LF YV +S+K KN
Sbjct: 228 RAYGLPYWARPEPEDPALLHVNDLFMYVDYSKKCKN 263


>07_03_1610 -
           28131623-28131710,28132017-28132321,28132921-28133118,
           28134016-28134183
          Length = 252

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 475 DTGHLCLPCSRH*NVAET 528
           D+  LCLPC RH + A T
Sbjct: 39  DSARLCLPCDRHVHAANT 56


>09_04_0594 -
           18831011-18831360,18831562-18832111,18832364-18833406,
           18833496-18833760,18835194-18835340,18835431-18835511,
           18835626-18835804,18835935-18836093,18836269-18836398,
           18836935-18837094,18837337-18837419,18837865-18837915,
           18838035-18838151,18838273-18838359
          Length = 1133

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +3

Query: 93  DTKQFENKFKVLAKELSCRFVHEENKILNTLKEELLCYFNGNLKKF 230
           D +  + K +V+ KE        E K+  TLK +L  Y  GN ++F
Sbjct: 157 DARMLQEKMRVVQKE-------REEKLAETLKNKLHLYVQGNKEEF 195


>06_02_0222 +
           13229330-13229501,13230175-13230275,13230381-13230574,
           13232600-13233068
          Length = 311

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 15/36 (41%), Positives = 17/36 (47%)
 Frame = -1

Query: 485 CPVSISGVLSWLIKVISCFSGDNRDPFCTRDC*ESE 378
           CP S SG  S      S  SGD  DP C + C  S+
Sbjct: 225 CPGSGSGSSSSFSSSSSSTSGDAEDPACAQRCATSD 260


>01_07_0248 +
           42261373-42261609,42261733-42261905,42261986-42262058,
           42262148-42262282,42262352-42262562,42262886-42263034,
           42263169-42263267,42263821-42263989,42264176-42264308,
           42264600-42264694,42264774-42264882,42265136-42265295,
           42265433-42265594,42265814-42265985,42266254-42266402,
           42266914-42266951,42267779-42267839,42267913-42268155,
           42268233-42268315,42269521-42269609,42270449-42270495,
           42270576-42270656,42270737-42270899,42271077-42271267,
           42271691-42271762
          Length = 1097

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = -1

Query: 554 FQAWYFYYNVSATFQCREHGRQRCPVSISGVLSWLIKVISCF 429
           F + +  ++++ TF CR+HG  R  V  +   S L  + S +
Sbjct: 189 FISRFAVHHINVTFSCRKHGANRADVHSASTSSRLDAIRSVY 230


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,584,796
Number of Sequences: 37544
Number of extensions: 277073
Number of successful extensions: 640
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 640
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)