Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40437
         (632 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457282-1|CAG33563.1|  212|Homo sapiens RAB17 protein.                34   0.48 
BC050426-1|AAH50426.1|  212|Homo sapiens RAB17, member RAS oncog...    34   0.48 
BC009827-1|AAH09827.1|   85|Homo sapiens RAB17 protein protein.        34   0.48 
BC007907-1|AAH07907.1|   85|Homo sapiens RAB17 protein protein.        34   0.48 
BC000929-1|AAH00929.1|  110|Homo sapiens hypothetical protein FL...    34   0.48 
AK022600-1|BAB14121.1|  212|Homo sapiens protein ( Homo sapiens ...    34   0.48 
AC104667-3|AAY24047.1|  212|Homo sapiens unknown protein.              34   0.48 
BC113380-1|AAI13381.1| 1147|Homo sapiens KIAA1429 protein.             33   0.64 
BC112288-1|AAI12289.1| 1147|Homo sapiens hypothetical protein LO...    33   0.64 
BC069239-1|AAH69239.1| 1190|Homo sapiens KIAA1429 protein protein.     33   0.64 
BC053875-1|AAH53875.1|  656|Homo sapiens KIAA1429 protein protein.     33   0.64 
BC003701-1|AAH03701.2| 1198|Homo sapiens KIAA1429 protein protein.     33   0.64 
AK022906-1|BAB14301.1| 1091|Homo sapiens protein ( Homo sapiens ...    33   0.64 
AB037850-1|BAA92667.1| 1795|Homo sapiens KIAA1429 protein protein.     33   0.64 
CR533454-1|CAG38485.1|  212|Homo sapiens RAB17 protein.                31   3.4  

>CR457282-1|CAG33563.1|  212|Homo sapiens RAB17 protein.
          Length = 212

 Score = 33.9 bits (74), Expect = 0.48
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = +3

Query: 81  VCFEDTKQFENKFKVLAKELSCRFVHEENKILNTLKEELL 200
           V F++ K+F +  K+L  E S +  H+ +++ NT+ +ELL
Sbjct: 142 VTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELL 181


>BC050426-1|AAH50426.1|  212|Homo sapiens RAB17, member RAS oncogene
           family protein.
          Length = 212

 Score = 33.9 bits (74), Expect = 0.48
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = +3

Query: 81  VCFEDTKQFENKFKVLAKELSCRFVHEENKILNTLKEELL 200
           V F++ K+F +  K+L  E S +  H+ +++ NT+ +ELL
Sbjct: 142 VTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELL 181


>BC009827-1|AAH09827.1|   85|Homo sapiens RAB17 protein protein.
          Length = 85

 Score = 33.9 bits (74), Expect = 0.48
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = +3

Query: 81  VCFEDTKQFENKFKVLAKELSCRFVHEENKILNTLKEELL 200
           V F++ K+F +  K+L  E S +  H+ +++ NT+ +ELL
Sbjct: 15  VTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELL 54


>BC007907-1|AAH07907.1|   85|Homo sapiens RAB17 protein protein.
          Length = 85

 Score = 33.9 bits (74), Expect = 0.48
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = +3

Query: 81  VCFEDTKQFENKFKVLAKELSCRFVHEENKILNTLKEELL 200
           V F++ K+F +  K+L  E S +  H+ +++ NT+ +ELL
Sbjct: 15  VTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELL 54


>BC000929-1|AAH00929.1|  110|Homo sapiens hypothetical protein
           FLJ12538 similar to ras-related protein RAB17 protein.
          Length = 110

 Score = 33.9 bits (74), Expect = 0.48
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = +3

Query: 81  VCFEDTKQFENKFKVLAKELSCRFVHEENKILNTLKEELL 200
           V F++ K+F +  K+L  E S +  H+ +++ NT+ +ELL
Sbjct: 40  VTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELL 79


>AK022600-1|BAB14121.1|  212|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12538 fis, clone NT2RM4000356, moderately
           similar to RAS-RELATED PROTEIN RAB-17. ).
          Length = 212

 Score = 33.9 bits (74), Expect = 0.48
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = +3

Query: 81  VCFEDTKQFENKFKVLAKELSCRFVHEENKILNTLKEELL 200
           V F++ K+F +  K+L  E S +  H+ +++ NT+ +ELL
Sbjct: 142 VTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELL 181


>AC104667-3|AAY24047.1|  212|Homo sapiens unknown protein.
          Length = 212

 Score = 33.9 bits (74), Expect = 0.48
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = +3

Query: 81  VCFEDTKQFENKFKVLAKELSCRFVHEENKILNTLKEELL 200
           V F++ K+F +  K+L  E S +  H+ +++ NT+ +ELL
Sbjct: 142 VTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELL 181


>BC113380-1|AAI13381.1| 1147|Homo sapiens KIAA1429 protein.
          Length = 1147

 Score = 33.5 bits (73), Expect = 0.64
 Identities = 20/64 (31%), Positives = 34/64 (53%)
 Frame = +3

Query: 138  LSCRFVHEENKILNTLKEELLCYFNGNLKKFSVPLKTLGLTFKSLLQTQPMSTRLTIPQC 317
            LS R   +E KI N + + LL +  G  +K ++  +TL     SL+  + +S+ L +P+ 
Sbjct: 1049 LSGRLDSDEQKIQNDIIDILLTFTQGVNEKLTISEETLANNTWSLMLKEVLSSILKVPEG 1108

Query: 318  VFKG 329
             F G
Sbjct: 1109 FFSG 1112


>BC112288-1|AAI12289.1| 1147|Homo sapiens hypothetical protein
            LOC25962, isoform 2 protein.
          Length = 1147

 Score = 33.5 bits (73), Expect = 0.64
 Identities = 20/64 (31%), Positives = 34/64 (53%)
 Frame = +3

Query: 138  LSCRFVHEENKILNTLKEELLCYFNGNLKKFSVPLKTLGLTFKSLLQTQPMSTRLTIPQC 317
            LS R   +E KI N + + LL +  G  +K ++  +TL     SL+  + +S+ L +P+ 
Sbjct: 1049 LSGRLDSDEQKIQNDIIDILLTFTQGVNEKLTISEETLANNTWSLMLKEVLSSILKVPEG 1108

Query: 318  VFKG 329
             F G
Sbjct: 1109 FFSG 1112


>BC069239-1|AAH69239.1| 1190|Homo sapiens KIAA1429 protein protein.
          Length = 1190

 Score = 33.5 bits (73), Expect = 0.64
 Identities = 20/64 (31%), Positives = 34/64 (53%)
 Frame = +3

Query: 138 LSCRFVHEENKILNTLKEELLCYFNGNLKKFSVPLKTLGLTFKSLLQTQPMSTRLTIPQC 317
           LS R   +E KI N + + LL +  G  +K ++  +TL     SL+  + +S+ L +P+ 
Sbjct: 427 LSGRLDSDEQKIQNDIIDILLTFTQGVNEKLTISEETLANNTWSLMLKEVLSSILKVPEG 486

Query: 318 VFKG 329
            F G
Sbjct: 487 FFSG 490


>BC053875-1|AAH53875.1|  656|Homo sapiens KIAA1429 protein protein.
          Length = 656

 Score = 33.5 bits (73), Expect = 0.64
 Identities = 20/64 (31%), Positives = 34/64 (53%)
 Frame = +3

Query: 138 LSCRFVHEENKILNTLKEELLCYFNGNLKKFSVPLKTLGLTFKSLLQTQPMSTRLTIPQC 317
           LS R   +E KI N + + LL +  G  +K ++  +TL     SL+  + +S+ L +P+ 
Sbjct: 328 LSGRLDSDEQKIQNDIIDILLTFTQGVNEKLTISEETLANNTWSLMLKEVLSSILKVPEG 387

Query: 318 VFKG 329
            F G
Sbjct: 388 FFSG 391


>BC003701-1|AAH03701.2| 1198|Homo sapiens KIAA1429 protein protein.
          Length = 1198

 Score = 33.5 bits (73), Expect = 0.64
 Identities = 20/64 (31%), Positives = 34/64 (53%)
 Frame = +3

Query: 138 LSCRFVHEENKILNTLKEELLCYFNGNLKKFSVPLKTLGLTFKSLLQTQPMSTRLTIPQC 317
           LS R   +E KI N + + LL +  G  +K ++  +TL     SL+  + +S+ L +P+ 
Sbjct: 435 LSGRLDSDEQKIQNDIIDILLTFTQGVNEKLTISEETLANNTWSLMLKEVLSSILKVPEG 494

Query: 318 VFKG 329
            F G
Sbjct: 495 FFSG 498


>AK022906-1|BAB14301.1| 1091|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12844 fis, clone NT2RP2003297. ).
          Length = 1091

 Score = 33.5 bits (73), Expect = 0.64
 Identities = 20/64 (31%), Positives = 34/64 (53%)
 Frame = +3

Query: 138 LSCRFVHEENKILNTLKEELLCYFNGNLKKFSVPLKTLGLTFKSLLQTQPMSTRLTIPQC 317
           LS R   +E KI N + + LL +  G  +K ++  +TL     SL+  + +S+ L +P+ 
Sbjct: 328 LSGRLDSDEQKIQNDIIDILLTFTQGVNEKLTISEETLANNTWSLMLKEVLSSILKVPEG 387

Query: 318 VFKG 329
            F G
Sbjct: 388 FFSG 391


>AB037850-1|BAA92667.1| 1795|Homo sapiens KIAA1429 protein protein.
          Length = 1795

 Score = 33.5 bits (73), Expect = 0.64
 Identities = 20/64 (31%), Positives = 34/64 (53%)
 Frame = +3

Query: 138  LSCRFVHEENKILNTLKEELLCYFNGNLKKFSVPLKTLGLTFKSLLQTQPMSTRLTIPQC 317
            LS R   +E KI N + + LL +  G  +K ++  +TL     SL+  + +S+ L +P+ 
Sbjct: 1047 LSGRLDSDEQKIQNDIIDILLTFTQGVNEKLTISEETLANNTWSLMLKEVLSSILKVPEG 1106

Query: 318  VFKG 329
             F G
Sbjct: 1107 FFSG 1110


>CR533454-1|CAG38485.1|  212|Homo sapiens RAB17 protein.
          Length = 212

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 13/40 (32%), Positives = 25/40 (62%)
 Frame = +3

Query: 81  VCFEDTKQFENKFKVLAKELSCRFVHEENKILNTLKEELL 200
           V F++ K+F +  K+   E S +  H+ +++ NT+ +ELL
Sbjct: 142 VTFQEGKEFADSQKLPFMETSAKLNHQVSEVFNTVAQELL 181


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,604,341
Number of Sequences: 237096
Number of extensions: 1618532
Number of successful extensions: 3242
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3242
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)