Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40436
(684 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC063688-1|AAH63688.2| 385|Homo sapiens family with sequence si... 31 3.8
BC011716-1|AAH11716.2| 301|Homo sapiens FAM54A protein protein. 31 3.8
AL138828-2|CAI95285.1| 264|Homo sapiens family with sequence si... 31 3.8
AL138828-1|CAI95284.1| 379|Homo sapiens family with sequence si... 31 3.8
AL121713-3|CAI17909.1| 264|Homo sapiens family with sequence si... 31 3.8
AL121713-2|CAI17908.1| 379|Homo sapiens family with sequence si... 31 3.8
AK125758-1|BAC86277.1| 342|Homo sapiens protein ( Homo sapiens ... 31 3.8
BC035005-1|AAH35005.1| 770|Homo sapiens hypothetical protein FL... 30 6.7
BC034468-1|AAH34468.1| 770|Homo sapiens FLJ11171 protein protein. 30 6.7
AK023183-1|BAB14452.1| 586|Homo sapiens protein ( Homo sapiens ... 30 6.7
AK002033-1|BAA92047.1| 770|Homo sapiens protein ( Homo sapiens ... 30 6.7
AK000289-1|BAA91058.1| 363|Homo sapiens protein ( Homo sapiens ... 30 6.7
>BC063688-1|AAH63688.2| 385|Homo sapiens family with sequence
similarity 54, member A protein.
Length = 385
Score = 31.1 bits (67), Expect = 3.8
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +2
Query: 434 PLQIPQQASTPIVRPEQTCQTSETVSKAAIKSVREL*SSVTSLKRIALKI*RVGELK 604
PL++ + +P VR ++T + V++AAI+ + L + +T L+ I + ELK
Sbjct: 110 PLRLVRDPLSPAVRQKETVKNDLPVNEAAIRKIAALENELTFLRSQIAAIVEMQELK 166
>BC011716-1|AAH11716.2| 301|Homo sapiens FAM54A protein protein.
Length = 301
Score = 31.1 bits (67), Expect = 3.8
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +2
Query: 434 PLQIPQQASTPIVRPEQTCQTSETVSKAAIKSVREL*SSVTSLKRIALKI*RVGELK 604
PL++ + +P VR ++T + V++AAI+ + L + +T L+ I + ELK
Sbjct: 26 PLRLVRDPLSPAVRQKETVKNDLPVNEAAIRKIAALENELTFLRSQIAAIVEMQELK 82
>AL138828-2|CAI95285.1| 264|Homo sapiens family with sequence
similarity 54, member A protein.
Length = 264
Score = 31.1 bits (67), Expect = 3.8
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +2
Query: 434 PLQIPQQASTPIVRPEQTCQTSETVSKAAIKSVREL*SSVTSLKRIALKI*RVGELK 604
PL++ + +P VR ++T + V++AAI+ + L + +T L+ I + ELK
Sbjct: 104 PLRLVRDPLSPAVRQKETVKNDLPVNEAAIRKIAALENELTFLRSQIAAIVEMQELK 160
>AL138828-1|CAI95284.1| 379|Homo sapiens family with sequence
similarity 54, member A protein.
Length = 379
Score = 31.1 bits (67), Expect = 3.8
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +2
Query: 434 PLQIPQQASTPIVRPEQTCQTSETVSKAAIKSVREL*SSVTSLKRIALKI*RVGELK 604
PL++ + +P VR ++T + V++AAI+ + L + +T L+ I + ELK
Sbjct: 104 PLRLVRDPLSPAVRQKETVKNDLPVNEAAIRKIAALENELTFLRSQIAAIVEMQELK 160
>AL121713-3|CAI17909.1| 264|Homo sapiens family with sequence
similarity 54, member A protein.
Length = 264
Score = 31.1 bits (67), Expect = 3.8
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +2
Query: 434 PLQIPQQASTPIVRPEQTCQTSETVSKAAIKSVREL*SSVTSLKRIALKI*RVGELK 604
PL++ + +P VR ++T + V++AAI+ + L + +T L+ I + ELK
Sbjct: 104 PLRLVRDPLSPAVRQKETVKNDLPVNEAAIRKIAALENELTFLRSQIAAIVEMQELK 160
>AL121713-2|CAI17908.1| 379|Homo sapiens family with sequence
similarity 54, member A protein.
Length = 379
Score = 31.1 bits (67), Expect = 3.8
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +2
Query: 434 PLQIPQQASTPIVRPEQTCQTSETVSKAAIKSVREL*SSVTSLKRIALKI*RVGELK 604
PL++ + +P VR ++T + V++AAI+ + L + +T L+ I + ELK
Sbjct: 104 PLRLVRDPLSPAVRQKETVKNDLPVNEAAIRKIAALENELTFLRSQIAAIVEMQELK 160
>AK125758-1|BAC86277.1| 342|Homo sapiens protein ( Homo sapiens
cDNA FLJ43770 fis, clone TESTI2049469. ).
Length = 342
Score = 31.1 bits (67), Expect = 3.8
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +2
Query: 434 PLQIPQQASTPIVRPEQTCQTSETVSKAAIKSVREL*SSVTSLKRIALKI*RVGELK 604
PL++ + +P VR ++T + V++AAI+ + L + +T L+ I + ELK
Sbjct: 67 PLRLVRDPLSPAVRQKETVKNDLPVNEAAIRKIAALENELTFLRSQIAAIVEMQELK 123
>BC035005-1|AAH35005.1| 770|Homo sapiens hypothetical protein
FLJ11171 protein.
Length = 770
Score = 30.3 bits (65), Expect = 6.7
Identities = 16/69 (23%), Positives = 30/69 (43%)
Frame = -1
Query: 543 QSSLTDFIAALDTVSDVWHVCSGLTIGVLAC*GICSGPVVDVATGGLATSTGFPFSLTNS 364
QSS+ + A+ + +WH+ G + + C C+G ++ + S G F+L +
Sbjct: 478 QSSILEGTAS-NLECHLWHILEGKKLPKVKCSPFCNGEILKTLNEAIEKSLGGAFNLDSK 536
Query: 363 VTVHSPLSC 337
SC
Sbjct: 537 FRPKQQYSC 545
>BC034468-1|AAH34468.1| 770|Homo sapiens FLJ11171 protein protein.
Length = 770
Score = 30.3 bits (65), Expect = 6.7
Identities = 16/69 (23%), Positives = 30/69 (43%)
Frame = -1
Query: 543 QSSLTDFIAALDTVSDVWHVCSGLTIGVLAC*GICSGPVVDVATGGLATSTGFPFSLTNS 364
QSS+ + A+ + +WH+ G + + C C+G ++ + S G F+L +
Sbjct: 478 QSSILEGTAS-NLECHLWHILEGKKLPKVKCSPFCNGEILKTLNEAIEKSLGGAFNLDSK 536
Query: 363 VTVHSPLSC 337
SC
Sbjct: 537 FRPKQQYSC 545
>AK023183-1|BAB14452.1| 586|Homo sapiens protein ( Homo sapiens
cDNA FLJ13121 fis, clone NT2RP3002687. ).
Length = 586
Score = 30.3 bits (65), Expect = 6.7
Identities = 16/69 (23%), Positives = 30/69 (43%)
Frame = -1
Query: 543 QSSLTDFIAALDTVSDVWHVCSGLTIGVLAC*GICSGPVVDVATGGLATSTGFPFSLTNS 364
QSS+ + A+ + +WH+ G + + C C+G ++ + S G F+L +
Sbjct: 294 QSSILEGTAS-NLECHLWHILEGKKLPKVKCSPFCNGEILKTLNEAIEKSLGGAFNLDSK 352
Query: 363 VTVHSPLSC 337
SC
Sbjct: 353 FRPKQQYSC 361
>AK002033-1|BAA92047.1| 770|Homo sapiens protein ( Homo sapiens
cDNA FLJ11171 fis, clone PLACE1007317, weakly similar to
Drosophila melanogaster Adrift mRNA. ).
Length = 770
Score = 30.3 bits (65), Expect = 6.7
Identities = 16/69 (23%), Positives = 30/69 (43%)
Frame = -1
Query: 543 QSSLTDFIAALDTVSDVWHVCSGLTIGVLAC*GICSGPVVDVATGGLATSTGFPFSLTNS 364
QSS+ + A+ + +WH+ G + + C C+G ++ + S G F+L +
Sbjct: 478 QSSILEGTAS-NLECHLWHILEGKKLPKVKCSPFCNGEILKTLNEAIEKSLGGAFNLDSK 536
Query: 363 VTVHSPLSC 337
SC
Sbjct: 537 FRPKQQYSC 545
>AK000289-1|BAA91058.1| 363|Homo sapiens protein ( Homo sapiens
cDNA FLJ20282 fis, clone HEP03828. ).
Length = 363
Score = 30.3 bits (65), Expect = 6.7
Identities = 16/69 (23%), Positives = 30/69 (43%)
Frame = -1
Query: 543 QSSLTDFIAALDTVSDVWHVCSGLTIGVLAC*GICSGPVVDVATGGLATSTGFPFSLTNS 364
QSS+ + A+ + +WH+ G + + C C+G ++ + S G F+L +
Sbjct: 94 QSSILEGTAS-NLECHLWHILEGKKLPKVKCSPFCNGEILKTLNEAIEKSLGGAFNLDSK 152
Query: 363 VTVHSPLSC 337
SC
Sbjct: 153 FRPKQQYSC 161
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,945,306
Number of Sequences: 237096
Number of extensions: 2358234
Number of successful extensions: 5977
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5974
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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